Colletes gigas: 122397550
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Entry
122397550 CDS
T07492
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgig03041
]
122397550
03036 Chromosome and associated proteins [BR:
cgig03036
]
122397550
Spliceosome [BR:
cgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122397550
Chromosome and associated proteins [BR:
cgig03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
122397550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
122397550
NCBI-ProteinID:
XP_043252723
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MEEMDVENEKNSDKSSCEDLSDSKGDELEVVENETEETGIIESTDEQDEDDDEENDDEED
ADEAEVKVLEACLAQNPYDYASHVAIINKLQRMGELERLRAARENMSSKYPLSPELWLSW
IRDEIKLATTPEQRAEIVKLCERAVKDYLSVEVWLEYLQFSIGNMGTEKDSTKNVRQLFE
RALTDVGLHAIKGAIIWEAFREFELVLYALIDSTNQAERKEQLERIGNLFKRQLACPLLG
MEKTYEEYEIWHSGDGAEAVIDDKIVIRGYERASAQLNARLPYEEKIVSSDAESELLDSY
KAYLLHEKQNGDPGRICVLYERAVTDLSLEVSLWLNYLTYLEENIKIESVLDQVYQRASR
NVPWCAKIWQKWMKSYEKWGKPTLDVQALLENALRAGFSTAEEYRNLWIAYLEYLRRKLD
RDSTDEEKQLDILRNTFNRACEHLAKSFGLEGDPNCIILQFWARTEAIHANNMEKARSLW
ADILSQGHSGTASYWLEYISLERCYGDTKHLRKLYQKALASVKDWPESIANTWIDFERDE
GSLEQMEHCEVKTKEKLEKVAEERQKTQQTSNHKLSPLQNKKTNKRKPDDGGRWKNLGGS
PTKITKVETQIKPKLKESRLNFVKKIGDDNEEQKPKIAPPPGFKAPENDKMEIDNTPEVD
DKITVFVSNLDYTATEEEVKNALEPAGSITSFKMIRDYKGRSKGYCYVQLNNPEAVEKAL
KLDRTPIKGRPMFVSRCDPNKTTRTPGFKYSHSLEKNKLFVKGLPLTTTKEELEEVFKVH
GTLKEVRIVTYRNGHSKGLAYVEYEDVTTAGKALLATDGMKIGDKVISVAISQPPERKKV
QTMEETPLIKSLGGTTVKRTFGMPKTLLSMVPRTVKTTATNGSANVAGNGVPHKMSNQDF
RNMLLNKK
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatggatgtggaaaatgaaaagaacagcgataaaagttcgtgcgaggattta
tccgacagcaaaggcgacgagttagaagtagttgagaatgaaaccgaagaaacaggaatc
atcgaatctaccgatgaacaggacgaagatgatgatgaagaaaatgacgacgaagaggat
gccgacgaggcggaggtaaaagttttggaggcctgtcttgctcagaatccatatgattac
gcgagtcatgtagccattatcaataaattgcaaagaatgggtgaattggaacggttacgt
gccgccagagaaaacatgagctccaagtatcccttgagccccgaactctggttatcctgg
attcgggatgaaattaaattagccactacgccggaacagagagccgaaatagtaaaacta
tgcgaacgtgctgtcaaagattacctctccgtagaagtgtggctagaatacttgcagttc
agtattggtaatatgggcactgaaaaagattcaacaaagaatgtccggcaattatttgag
cgagcattaacagatgttggattgcacgctattaaaggtgccataatatgggaggcgttt
agagaattcgaacttgttttatatgcactgattgattccacaaatcaagctgaaaggaaa
gagcagctagagcgtattgggaatttattcaaaagacagttagcttgtcctctattaggc
atggaaaaaacatatgaggagtatgaaatttggcatagcggggatggtgcagaagctgtt
attgacgataaaattgtaatcagaggatacgaacgagcatccgcgcagctcaatgctcgt
ttaccttatgaagagaaaattgtttcgtcagatgctgaaagcgaacttttagattcatat
aaagcatatttgttacatgaaaaacaaaacggagatccaggacgaatatgtgttctgtat
gaaagagccgtcactgacctcagtttagaagtgtcactttggctcaattatcttacgtat
ttggaagaaaatataaaaattgaatctgtgttagatcaagtatatcaacgagcttcaaga
aatgttccttggtgtgcaaaaatatggcaaaaatggatgaagtcgtacgagaaatgggga
aaaccgacattagacgttcaagcattgctagaaaatgctttaagagctggattttctact
gcagaagaatatcgaaatctgtggatagcgtatttggaatatttacgacggaaactcgat
cgagattccaccgacgaagagaagcagttggatatattacgtaatacgttcaatagagct
tgcgaacacttagcaaaatccttcggtttagaaggagacccgaattgtattatattacaa
ttttgggcaagaactgaagctatacatgccaataacatggaaaaagctagatcattgtgg
gctgatatcttgtcgcaaggacactccggaacagcatcatactggttagaatatatttct
ttagaaagatgttatggagatacaaaacatttaaggaaattatatcagaaagctctggct
tctgtaaaagattggccggaaagcatagcaaatacttggatagactttgaaagggacgaa
ggaagtctggaacaaatggaacattgcgaggtaaaaacaaaagagaaactagagaaagta
gcagaggaaagacagaaaacacaacaaacttcaaatcataagctatcacctttgcaaaac
aaaaagactaataaaaggaaaccagacgatggtggtagatggaaaaatttaggaggttcg
cctacaaagattacgaaagtcgaaacacaaataaaaccaaaattaaaagaaagccgttta
aactttgtaaaaaagatcggcgatgataacgaagaacaaaagccgaagattgctccacca
cctggtttcaaagcgccagagaatgataagatggaaatagataatactccggaagtcgat
gataaaatcacggttttcgtaagtaatttagactacactgcaaccgaggaggaagtcaaa
aatgctttagaaccagctggatccattacatcgtttaagatgatacgagattataaagga
cgtagcaagggttattgctatgtgcagctaaacaatccggaagcggttgaaaaggcttta
aaattggatagaactcctataaaaggacgaccaatgtttgtttcaagatgtgatccaaac
aaaacaacgcgaacgccagggtttaaatacagtcactccctcgaaaagaataaactcttt
gttaaaggcttgccgttaacgacaacaaaagaggagctcgaggaagtctttaaagttcat
ggaacattaaaagaagttcgcatagttacttaccgtaacggtcattcaaaaggactagct
tacgttgaatatgaagatgtaactactgccggaaaggctctcctagctaccgatggaatg
aaaatcggcgacaaagttataagcgtggctataagccaaccacctgaacggaagaaggtt
caaacgatggaagaaacgcctttaattaagtctctaggtggcaccacagtaaaacgaacg
tttggtatgcctaaaacgttattgtctatggtacctcgtactgttaaaaccactgccaca
aacggcagtgcaaatgtggctggaaatggtgttccacataaaatgagtaatcaagatttt
agaaacatgttactgaataaaaaataa
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