Colletes gigas: 122397572
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Entry
122397572 CDS
T07492
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cgig
Colletes gigas
Pathway
cgig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122397572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122397572
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122397572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
PA28_N
CRISPR_Cas2
Motif
Other DBs
NCBI-GeneID:
122397572
NCBI-ProteinID:
XP_043252756
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MAVQPNQQFQMDVSSQQSFVRYFKNLPEKLNTTIRFFNRTDYYTLHGSDALFAAQEVFKT
TAVCKMLGSDPYKIEGVILNKNHFESFIRDLLLVKQYRIEVYVNQGSAKNQNWVLEYKGS
PGNLTQFEDILFDNNDVAVSVRVIAVKLGVEGKSRVVGLSCVDTTATLFSVCEFQDNESF
SNLESLIVTLAPKECLLIQGEGSHEFQTLKQLMERNNIMVTLRKKNEFSSESIVQDLNTL
IKFKKGQQQNVQSLPETNLNLAMSSTSALIKYLDLTSGEGNLNQFSMDQIEQSRYLKLDS
AAMKALNIEPRADTLSVLNGNAPTSILALLDKCRTPQGHRLLAQWIRQPLKDLSLIKERH
DIVEALVNDNELRSGLNEDHLRRIPDLQVLAKKLSSKKATLQDLYKIYTCVLHLPRLVKQ
LSDMNTVALRTMFTDPLIEHLKDMDKFQQMVGETIDLDAAERGDFLVRSEFDEELKELKV
SMDEVERQLQAQLSKVANDLSIGTSKILKLESNQQFGYYFRVTLKDEKVLRNKKHYTILD
SNKQGVRFRSNEMNYLNDDYIAAREKYTVEQKKVVTEIIEIAAGYNSPVKAIGNVLASLD
VLTAFASAAISANKPYIRPEMLPSEAGELNLVQVRHPCLEVQEGVDYIANDVNFKRGQCH
FCIITGPNMGGKSTYLRSVGVAALMAHIGSFVPCDKAQISLLDCILARVGADDSQLRGLS
TFMMEMIETAAVLRTVTCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATH
FHEITKLEEEVPAVKNNHVTALVNNNKLTLLYKVKPGVCDQSFGIHVAKMANFPQDVIEF
AKRKQAKLEDYQASVFEGSDNPQKKQKIIKEAEGIITEFVNKCKKLDKLLSDQDLKDKIS
TFKKQALSRKNPYIEALLAAS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacaaccgaatcaacaatttcaaatggatgtttcaagtcaacagagcttcgtt
agatactttaaaaacctcccagaaaaactcaatactactatacgattttttaatagaaca
gattattacacattacatggtagtgatgctttatttgctgcacaggaagtttttaaaacc
acagctgtttgtaaaatgttaggatctgatccatacaaaattgagggtgttattctcaat
aagaaccattttgagtcttttatacgtgatttattattagtgaaacaatataggatagaa
gtttacgtcaatcaaggttcagcaaaaaatcaaaattgggtattagaatataagggttct
cctggcaatttaacacagtttgaagatatattatttgataataacgatgtggcagttagt
gtacgcgtaatagcggtgaaattgggggtagaaggaaaatcaagagtcgttggtttaagt
tgcgtagatactactgcaaccctattttctgtttgtgaatttcaagataatgagtcattt
tctaatctggaatctcttattgttacacttgctcctaaagaatgtttattaattcaaggc
gaaggtagtcacgaatttcaaactctaaagcagttaatggaacgaaataatataatggtc
actttgagaaaaaagaacgaattttcgagcgagtcaatagtgcaagatttaaatacttta
ataaaattcaaaaaaggacaacaacaaaatgtacaatctctgcctgagaccaatttaaat
cttgctatgtcatctacttctgctcttattaaatatttagatttaacatcaggtgaagga
aatttaaatcaatttagcatggaccaaatagaacagtcgcgttatttgaaactagattca
gctgctatgaaagcacttaacattgaaccacgtgctgacactctatcagtattaaatgga
aatgcccctacaagtattttagccctgttggataaatgcagaacacctcagggtcatagg
cttcttgcacaatggattaggcaacctcttaaagatttgtcccttataaaagagagacac
gacattgttgaagcattagtgaatgataatgaattaaggtctggacttaatgaagatcat
ttaaggcgcataccagatttacaagtacttgcaaaaaaattatccagcaaaaaagcaact
ttgcaagatttgtataagatttacacatgtgtattacatttaccaagactagtaaaacaa
ttatctgatatgaacacagtggccttacgtacaatgttcactgatcccttaattgaacat
cttaaagacatggataagtttcaacagatggttggtgaaacaattgatttggatgctgct
gaaagaggagatttcttagttcgatcagaatttgatgaagaattaaaagagttgaaagtt
tctatggatgaagtggaaagacaattacaagcacagttatctaaggttgctaacgatctc
tcgatcggaactagcaaaatactaaaactagaatctaatcaacaatttggctattatttt
cgtgtcacactaaaggatgaaaaagtgttaagaaataaaaaacattacactattttggat
tctaataaacagggcgtacgattccggagcaatgaaatgaactacttaaatgacgattat
attgctgccagagaaaagtatacagtagaacagaaaaaggttgtgacagaaataatagaa
attgcagctggttacaatagtccagtaaaagctattggaaatgtgctggccagtcttgat
gtactcactgcctttgcatctgctgccataagtgccaataaaccatacattcgtcctgaa
atgttgcccagtgaagcaggcgaattaaaccttgttcaagttcgacatccatgcttagaa
gttcaggaaggagtagattatatagccaatgatgtcaattttaaaagaggacagtgtcat
ttttgtatcataactggcccgaatatgggaggtaaaagtacttatttaagatccgttggt
gttgccgcattaatggcgcatattggaagttttgttccctgtgacaaagcacaaatatcg
ttattggattgtatattagcgcgtgtaggagccgatgattctcaattaagaggactttct
acattcatgatggaaatgatagaaactgctgctgtattaaggacggttacatgtaattct
cttgtgttgattgacgagttaggcagaggtacttctacttatgaaggttgtggtatagca
tggtcaattgcagagtatttagcaaaagaaattaaatgctattgcctttttgcaacacat
ttccacgaaattactaaattagaggaggaagtgcctgctgttaaaaacaaccatgttaca
gctcttgtcaataacaataagttaacattattgtataaagtcaaaccaggtgtgtgtgat
cagagttttggaatacatgttgctaaaatggccaatttccctcaagatgtgatagagttt
gctaaacgcaaacaagcaaaacttgaagattatcaagcttcagtttttgaaggatctgat
aatccacagaagaaacaaaaaataatcaaggaagctgaaggaattattacagaatttgtt
aacaaatgtaagaagttggataaacttttgtcagatcaagatttaaaagataaaatttca
acatttaagaaacaagctttgtctcgcaaaaatccttacatagaagcgcttcttgctgct
tcctaa
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