Colletes gigas: 122397606
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Entry
122397606 CDS
T07492
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cgig
Colletes gigas
Pathway
cgig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122397606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgig03009
]
122397606
Ribosome biogenesis [BR:
cgig03009
]
Eukaryotic type
Pre-60S particles
RNases
122397606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
122397606
NCBI-ProteinID:
XP_043252793
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MLPSTGYFKTINCPFYENGTCDRPYCHFKHSKREDVVVTTEATGTLESRTTGQVQETKST
LVQSDSDVLQQLVTEAVKKVLANQEVANTDKFSCQNVVSQVVEGLKPSLTPGASATLDIV
TANTVEKRTDVPTPITKPVPCVYNPTPIAELKKRHIPIISYMPTRESRVAVKRKSSPDGI
KPWLSTGGESADPQATEAKYKPTTIVNSNSRDAMQSYVPTCKSDTVSSNSYEDGNSSDYL
FKLREPYYPKVKKRREEYVPKKVKAPLKTVKSISELALDGFASEFDIVNEVTTDAKPTSN
VQSIEEPRDSSLDLEAKFSDDEEDDVDIHDNTEDYSHDLNKINGDLIDDASTEPSEFFHD
IMDNDSSNDTQDTRVLSPKANTNDEYSSKENRDGKVSTQEKSATKETSKSERHDKEKTVE
VDTQKAVDKNTKEHKSRSKSKSKDQKSHDTSHKRNKDSRVSSEKSRSTSDSKSKDKSRTR
HESKDSKSRKHNDKSKDINQEKHRDKERHKEKNESKHKSKRDRRDSRESERHRERNSKSS
ESSKRPERNKKRSVDSKRSKSDRKSDDKTMERLRVHIENRDERNSTDRSMSPLESFRSNM
DDAGDENDDCFISFINNDMDDIVSIASDSDHDVQEECLKIFQEYQVSERSKSTVSTRESS
SVPEKEQSEDIRRKRVAHPSAATCVSRQVVRQELKKAANPQLKMYERWRLMRDTIAEKAA
PASSSVPKDVRRNHIEATTAAAHNNEIKLNGNGRVRIAHVPYAKSLAIEKKKMTENVGKS
TETKATDNYKTAAQTAKSGVRVAHVPQTVPQLIRPEPLQVTTQKFPLNVRQYYVNMMQDV
CVQIYTNSEDAAQRALKEEFACHERCKALAVYKNSCMLATHRLRKEADQSVSIEGSASLT
VASNNMVSHEAVLAGKAKGSWSVLKTKKSVTQFRGVMLYGMLKKWIMTEQQLRDNGFPRT
HPDGQKGRAKIYVINTRNQNVLSKVPNERICSRCGQTYMINKQGFAVRSQNCIYHWGRKF
TIRGEGKYSCCQQYGSATGCCDAKTHVWEYTDYENLRGYVKTLPKDMLLEEQGVYALDCE
MSYTTQGLELTRVTVIDEDCNVVYETLVKPQNPIIDYNTRFSGITEECMKDVTTTLLDVQ
ASLLTMFSEKTILVGHSLESDFKALKLLHDTVVDTSIMFPHKNGYPQKRALKNLCSEYLR
KIIQNDVGGHDSKEDAVACMELILWKAKEEAKLQ
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcgactggttactttaaaactatcaattgtccgttttacgagaacggtact
tgcgacagaccctactgtcatttcaagcactcgaagcgagaagatgtcgtggttacgacg
gaagcgaccgggacgctggaaagccgtacgacaggccaggttcaagaaacaaaatctaca
ttggtccaatccgactcagatgttttacaacagttagtaactgaggctgtcaagaaggtt
ctagctaaccaagaagttgctaatacagacaaattttcgtgtcagaacgttgtttctcag
gtagtggagggactgaagccatctttgactcccggagcatccgctacattagacatagtc
acagctaatacagtagagaaaagaacagacgtaccaacgccgattactaaacctgttcca
tgcgtgtataatcctacacccatcgcagaactgaagaaacgtcacataccgataatatcc
tatatgccaaccagggaaagtagagtagccgtgaaacgtaaaagttctcccgatggaatt
aagccatggctaagcacgggtggcgagtcggccgaccctcaagctaccgaagctaaatat
aaacctaccacaatagtcaattccaattcgcgggatgctatgcaaagttatgtacctact
tgtaagtctgacactgtttcatcgaattcgtacgaagatggtaattcgagcgattacctg
tttaaactcagggagccatattatccaaaggttaagaagcggagggaagagtacgtaccg
aagaaagtaaaggctccgttaaaaaccgttaagagtataagcgaattggcgttagatgga
tttgcgtcagaattcgatatagtaaacgaggtaacgaccgacgccaagcctacttctaac
gtgcagtctatcgaggagcctcgagattcttctttagacttagaagcgaaattctcggac
gacgaagaagacgacgttgatattcacgataataccgaagattatagtcatgatttaaat
aagatcaatggtgatctcatcgacgatgcgtccacggaaccgagcgaattcttccatgat
attatggacaatgactcctcgaacgatacgcaagatacacgtgttctttcaccaaaagca
aatactaacgacgaatacagcagcaaagaaaaccgcgacgggaaggtgtcgacgcaagag
aaatccgcgactaaagaaacttcgaaatccgaacgacacgataaggaaaagacggtggaa
gtagacacgcagaaagcggtcgataaaaacacaaaggaacacaaaagcagaagcaagagc
aaaagcaaagatcaaaagagtcacgacacttctcataaacggaacaaggacagtcgtgta
tcgagcgagaaatcgcgttctacgtccgatagcaagagcaaagacaaaagtcgtaccaga
cacgaaagtaaggattcgaaaagtaggaagcacaatgataaaagcaaagatataaatcaa
gagaagcatcgggacaaagagaggcataaagaaaagaacgaaagcaaacacaaaagcaaa
cgggataggagggattctcgcgaatcggaaaggcatcgcgagcgcaattccaagtcgtcc
gagagttcaaagaggccggaacgtaacaagaaaagaagcgtcgatagcaagcgttcaaag
tcggatcgtaaatccgacgataaaacgatggaacgattacgtgtacatatagagaataga
gatgaaagaaattcgaccgacaggtccatgagtcctttggaaagctttcggtcgaatatg
gacgacgctggcgacgagaacgacgactgctttattagtttcatcaataacgatatggat
gatattgtttcgatcgcgtctgattcggatcacgatgtacaagaggagtgcttgaagata
tttcaggaatatcaagtgtctgaacgttcaaaaagcacggtgtcaacgagagaatcgtcg
tcggtgcctgagaaagaacagagcgaagatattcgtagaaaaagagtagcgcatccatcg
gcggctacgtgcgttagcagacaggttgttcgccaggaattgaagaaagccgcgaatccg
caactgaaaatgtatgaaagatggcgcctgatgagagacactatcgcggagaaggcagct
ccagcgagtagtagcgttcccaaggatgtgcgtcgaaatcatatcgaggcaacaacagca
gcagcgcacaataacgaaataaaattaaatggaaacggtcgcgtcagaattgctcacgtg
ccgtatgcgaaatctctggcgatagagaagaaaaagatgacggagaacgtgggtaaatcg
acggaaacgaaagcaacggataattacaaaacagcggcgcaaaccgcgaagagcggtgta
cgcgttgctcatgtgcctcaaaccgttccacagttgatacgacccgagccgttgcaagtg
accacgcagaagttccctctgaacgttcgtcagtattacgtgaacatgatgcaggacgtg
tgcgtgcaaatttacacgaacagcgaggatgcggcgcagcgtgcgcttaaagaagaattc
gcttgccacgagaggtgtaaagcgttggcggtctataaaaattcgtgtatgcttgctacg
cacaggctgaggaaagaggctgatcaaagtgtatcgatagaaggtagtgcgtcgttaaca
gtggccagtaacaatatggtgtcccacgaggcggtactagctgggaaagcgaaaggttct
tggagcgttcttaaaacgaagaaatccgtcacgcagttcagaggagtcatgctttatggt
atgttgaaaaaatggataatgacggaacagcaacttcgagataacggatttccacgtacg
cacccggacggtcaaaagggccgtgcaaagatttacgtgataaacacacggaatcaaaat
gtcctgtcgaaagtgcctaacgaaagaatctgcagtcgttgtggtcaaacgtacatgata
aacaaacaaggattcgcggtacggtcgcagaattgtatatatcattggggaagaaagttc
acgatcagaggagaggggaaatatagttgttgtcaacaatatggttccgcgaccggatgt
tgcgacgcgaagacgcacgtttgggaatacaccgactatgagaatcttcgtggttatgtg
aaaactttgccgaaagacatgctactcgaggaacagggagtttacgctctcgattgcgaa
atgagttataccacgcaaggcttagaactaaccagggtaacggttatcgacgaagattgc
aacgtagtgtacgagacgttggttaaaccgcaaaatccaataatcgattataatacaagg
ttttctggaatcacggaagaatgtatgaaggacgtgacgacaacgttgctagatgttcaa
gcgtcgctccttacaatgttttcggaaaaaacaatattggtgggtcatagtcttgaaagc
gatttcaaagcgctgaaactactgcacgacaccgtagtcgacacgagcataatgtttccg
cacaagaacggatatccgcaaaaacgggcgctgaagaacctttgttccgagtatctgagg
aagatcatacagaacgatgtcggtggacacgacagcaaagaggacgccgttgcctgtatg
gaattgattctatggaaagcgaaggaggaagcgaagttacagtga
DBGET
integrated database retrieval system