Colletes gigas: 122397829
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Entry
122397829 CDS
T07492
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
cgig
Colletes gigas
Pathway
cgig04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122397829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF2508
Motif
Other DBs
NCBI-GeneID:
122397829
NCBI-ProteinID:
XP_043253196
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MAQINSYQAILAVLLFVLTIVSNAADLQYPRQRIPVRGSVQRGDMSPTEVAAERHNWPRQ
TVPSPRGSHAKKKHPCEQSSCYPATGNLLIGRKHRLEASSTCGLHGPERYCIVSHLKDRK
KCFFCDASLPKQRHNIENIGSTGWWQAENGVENVSIRFNLEAEFHFTHIIIRFKTFRPAA
MLIERSYDFGKTWKVYRYFAHNCDQYFPGVSINPPQRLTEVICETRYSAVAPSSEGDVIF
RVLPRNLEIDNPYSKEVQNLLKMTNLRINMTRLHTLGDDLLDDRAEIREKYYYAISNMVI
RGSCSCYGHASRCLPLPGVQNEEDMVHGRCECTHNTTGLNCEKCQDFYNDLPWKPAVGKQ
TNACRPCNCNNHSTSCHFDETVYERSGRVSGGVCDDCRHNTRGQNCEQCKPFYYHDVTKD
ISHPEACLSCDCDLSGSLDDGICDSRTDPLSGDESGRCHCKTNVEGRRCDRCKNGYWNFD
PENPEGCQACTCNILGTIDNRGCNMVTGECTCKRFVTARDCNQCIPEYWGLSEDPDGCKP
CDCDPGGSYENSCDVISGQCRCRPHISGRTCNQPEQSYYTGSLDFLIYEGELSRATDNCQ
VVIREPYRDGRNSTWTGTGFMKALEDSMLNFTIDDIRKTLFYDVIIRYEPVQPGVWENVQ
IFIERNDPVDPSGPCGDWRPDDDTLWAQLPVRSRSVVAEPSICLEEGKRYNLLLQFRKFQ
GHTETPSASILVDSIVLRPRIDDIPFFKSSGIGELRRQEYEAYHCSEFFNDIATVWTNVP
EVCKKYQNSIGYFVYDGAHSCECNETGSHSLLCENYGGTCPCKPNVVGRRCDRCAPGTYG
FDPEGCISCDCDGVGALDNFCDVETGRCKCRPNTYGRTCGQCEPGFWNFPHCQRCECNGH
AESCDSKTGACINCRDYTTGHNCDRCIDTYYGDPRLGVDIPCRACPCPGTLDSGHSYAES
CSLDSMTHDVICECYDGYTGPRCEACAENYFGNPEVPGGSCEPCNCNNNTDLRRPGNCDP
NTGRCLQCLHNTDGANCQICKAGFYGNALEQDCQVCGCDPLGTDSNAGGPCNHRTGQCPC
LPHVIGQLCDSCEENHWRIASGQGCDPCECDAVGSVSDRCNPFDGTCECRSGFGGRQCKE
CQTNYWGNPNVECYACDCDLSGSSSQQCDRESGMCVCRTGIGGEKCDKCYRGFYGNAPQC
IPCGECFDNWDITLTELKNKTDLVIEEASRIQKVGTTGVYSEEFDDMEESLVQVRALISN
ASIRSQDLDELNDLTIELNKNVSKSGKKLEEANSLLENVSQRVNLGDAALKNLKNRTNNL
HQTAADLKENATRLQEGNVQGALNVTQQMAEQSRQAEKMANDTGNVLADAERFSKHTETL
LSKNLDSVKNAGEMNKESLDAIARKLKTFDEIMPVLNLDMCGDNVTDCSSVCGGADCGFC
GGWSCNDGALTKASQALDVAKKQADKIKTHKEEAEQLLRNMIQVKRDAMTARSNAQNAFN
FARNTRNLSDRVTTDLSDVNKRIRDLLEEDQPTPAMIRDLANEVLTKNIQLKPDEIKDLA
SRIKSIVGSLTDSEKILADTRDDLILATNLQEEANEAKKDAIEKQTLANKVVVLLNEAEK
AQGLAQAAINQAERDVKRSEKDLEEISEVTKGAQMQANSTTQTVDGLETRLRQLQTQSVK
NNYTLTQVIGDQARNVGEEAEAVDVKTRKLGEDYKRVDESLDLRVNKSKGNILRAKEFLQ
RASKLTADTSTKLKDLDGMESVYRDNEKMLSDLMIEVDTLTDEMEKHLKEIEQKAQQYRQ
CTS
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaataaattcttatcaggcgatccttgcagtattgttattcgtattaactatt
gtttcaaatgctgcggatctgcaatatcccagacaaagaattcctgtcagaggatcggtc
cagagaggagatatgtcacccacggaggtggcggcagagcgccataattggccaaggcag
actgttcctagtccaagaggctcgcacgcgaagaagaagcatccctgcgagcagagttcc
tgttaccccgcgacgggaaacctgttgatcggtcgtaaacatcgattggaagcgtcgtcc
acttgcggtcttcacggtcccgaaagatactgcatcgtttcgcatctgaaagatcgaaag
aagtgcttcttctgcgatgcatcgttaccgaaacaacgacacaacatcgagaacatcggc
agcacgggctggtggcaagcggaaaatggcgtcgagaacgtctcgatacgtttcaatctc
gaggcggagtttcacttcactcacatcatcatccgtttcaaaacgttccgacccgcggcg
atgctgatcgagagatcctacgatttcggaaagacctggaaagtgtatcgatacttcgcc
cataattgcgaccagtacttccctggcgtctccatcaatccaccccagagactcaccgaa
gttatctgcgaaacgcgatactctgccgtggcgccatcgtcagaaggtgacgttatcttt
agagtgctgcctcgaaacttggagatcgataatccctattcaaaggaagtacaaaacctg
ttgaaaatgacgaatcttcgtatcaacatgaccagattgcacactttgggcgacgatctc
cttgacgatcgagcggaaattcgcgagaaatactattatgctatttcgaacatggttatt
cgtggatcgtgctcttgttatggccacgcgtccaggtgtcttcctttacctggtgtccag
aacgaggaggacatggtgcatggtaggtgcgagtgcacccacaacaccacggggctcaac
tgtgagaaatgtcaggatttctataacgatctaccgtggaagccagccgttggcaaacag
acgaacgcttgcaggccgtgcaattgcaataatcattccacctcgtgtcacttcgacgaa
accgtttacgagagatcaggaagagtctcgggcggagtctgcgacgactgtcgtcacaat
actcgcggtcagaactgcgaacaatgcaaaccgttttattatcacgacgtcacgaaggac
atatcgcaccccgaggcttgtctgtcctgcgattgtgatctctctggctcgttggacgac
gggatctgcgactccagaaccgatcccctcagcggagacgagtctggtcgttgccactgc
aaaacgaacgtggaaggtcgtcgctgcgatcgttgcaaaaatggctactggaacttcgac
ccagaaaatccggagggttgtcaagcttgtacctgcaatatcttgggcaccatcgacaat
cgcggatgcaacatggtcactggcgagtgcacctgcaaacgttttgttactgctcgcgac
tgcaaccaatgtattccggaatattggggcttgtcggaggatccagacggttgcaagccg
tgcgactgcgatccaggcggctcttacgagaattcttgcgacgtcatatccggccaatgt
cgctgcaggccccacatcagcggcagaacctgcaatcaacctgagcagagttactacacc
gggtctctggacttcctgatctacgagggcgagttatcgagggctacagacaactgccaa
gtggtgatcagagaaccataccgcgatggcagaaacagtacttggaccggaacaggattc
atgaaggcgttggaggattcgatgctgaatttcacgatcgacgatatacgtaaaactttg
ttttacgatgtgatcatacgttacgagcccgttcagcctggggtctgggaaaacgttcaa
atattcatcgagaggaacgatccagtggatcctagcggtccttgcggcgactggagaccg
gatgacgacacgttgtgggcacagttaccagtacgatccaggagcgtcgtcgcggaaccc
tccatatgcttagaagaagggaaacgatacaatctcctgttgcaattccgtaaattccaa
ggccacacggagacaccttcggcttccattttagtcgactccatcgttttaagaccgaga
atagacgacataccattcttcaagtcatccggtatcggtgaactccgtcgtcaagaatac
gaagcgtatcactgcagtgaattcttcaacgacatcgctaccgtgtggaccaacgttccc
gaggtctgcaaaaagtaccagaatagcattggttatttcgtgtacgacggcgcccattct
tgcgagtgcaacgaaaccggatctcacagtttgctttgcgagaactatgggggcacgtgt
ccctgcaaaccgaacgtcgtaggcaggcgatgcgatcgctgcgcgccgggaacttacggt
ttcgatccggaaggttgcatttcgtgcgactgcgatggcgtaggagctctggacaatttt
tgcgacgtggagaccggtcggtgcaagtgtcgaccgaatacctacggtagaacttgcgga
caatgcgagcctggattctggaatttcccacattgccaacggtgcgagtgcaacggccac
gccgaaagctgcgactcgaaaaccggagcgtgcatcaactgtcgtgattatacgaccggc
cacaactgcgatcgatgtatcgacacgtactatggcgatcctagactcggagtggacata
ccttgcagagcctgtccttgtccaggaaccttggattccggccattcttacgccgagagt
tgttccctggactcgatgacccacgacgtgatctgcgagtgttacgacggttacaccggc
ccccgttgcgaagcctgcgcggagaactacttcgggaatcccgaggttcccggcggcagc
tgcgaaccctgcaattgcaacaacaatacggacctccgtcgacctgggaactgcgatccc
aacactggtcgttgcttgcaatgtctgcacaacacagacggagcgaattgtcagatttgc
aaggccggcttctacggcaatgcgctcgaacaggattgccaagtatgcggttgtgatcct
ttggggaccgacagcaacgctggtggtccttgcaaccaccgaaccggccagtgtccttgt
ctgccccacgttatcggtcaactgtgcgattcctgcgaggaaaaccattggaggatcgcc
agtggccaaggttgcgacccttgcgagtgcgacgccgttggaagcgtctccgatagatgc
aatcctttcgacggcacctgcgagtgcagatccggtttcggcggaaggcagtgcaaggaa
tgccagacgaactactggggcaacccgaacgtcgaatgttacgcttgcgactgcgatctg
tccggctcgtcgagccagcaatgcgacagggaatccgggatgtgcgtttgcagaacagga
atcgggggcgagaaatgcgacaagtgttatcgaggtttttacgggaacgcgccccagtgc
ataccctgcggcgagtgtttcgacaattgggacatcacgctgacggagctgaagaacaag
acggacctcgtgatcgaggaggcatccaggatccagaaggtggggaccactggcgtctac
agcgaggaattcgacgacatggaggagtctttggttcaggtgagggcgttaatcagcaac
gcctccatcaggagccaggatctggacgagctgaacgacctgaccatagagttgaacaag
aacgtctcgaagtctggcaagaaactggaagaagcgaacagtcttctggagaacgtcagc
cagagagtgaacctaggcgacgcggcgctgaagaatctcaagaacaggacgaacaatctg
caccagaccgccgccgatctcaaagaaaacgcgaccaggctgcaggagggtaacgtgcaa
ggcgctctgaacgttacgcaacaaatggcggagcagtcgaggcaggcggagaaaatggcg
aacgacaccgggaacgtgctagcggacgcggagaggttcagcaagcacacggagactctg
ctctccaagaacctcgactccgtgaagaacgcaggggaaatgaacaaagagtccctggac
gcgatcgcccggaaactgaagacgttcgacgagattatgccggtcttgaatctcgatatg
tgcggggacaatgtcacggactgtagcagcgtctgcggcggagcggattgcggtttctgc
ggaggatggtcctgtaacgatggcgctctcacgaaggccagccaagctttggacgtggcc
aagaaacaggcggataagatcaagactcacaaggaagaggctgaacagctgttgcgtaac
atgattcaagtgaagcgagacgcgatgacggctaggtcgaacgcccagaacgccttcaac
ttcgccaggaacacgcgcaatctgtccgacagggtgacgacggacctctccgacgtgaac
aaacggatacgagacttgctggaggaagatcaaccgacgccagcgatgatcagagacctg
gcgaacgaggtgctgaccaagaacattcagctgaagcccgacgagatcaaggacctggcg
agccgcataaagagcatcgtgggctctctgaccgattcggagaagatcctcgctgacacc
agggacgatcttattctggctacgaatctgcaggaggaggcgaacgaggccaagaaggac
gccatcgagaaacagactctggccaacaaggtggtggtgttactgaacgaggctgagaaa
gctcagggtttggcgcaggcggcgatcaatcaggcggaacgcgacgtgaagaggtcggag
aaggacctggaggagatctctgaggtgaccaaaggcgcgcagatgcaagctaatagcacc
acgcagactgtcgatggtttggagacccgtttgaggcagctgcagacgcagtccgtgaag
aacaactacacgctcactcaggtgatcggtgatcaggctagaaacgtgggcgaggaggca
gaggccgtcgacgtaaagacgaggaaactcggggaggattacaaacgggtggacgagtcg
ctggatctgagagtgaacaagagcaagggtaatatattgagggcgaaggagttcctccag
agggcctccaagctcacggccgacacgtcgacgaagctgaaggatctagacggcatggag
agcgtgtacagggacaacgagaagatgctgagcgatctgatgatcgaggtcgacacgttg
accgacgagatggagaagcatctcaaggagatcgagcagaaggctcagcagtacaggcag
tgcacatcttga
DBGET
integrated database retrieval system