Colletes gigas: 122397837
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Entry
122397837 CDS
T07492
Name
(RefSeq) exosome complex component RRP41 isoform X1
KO
K11600
exosome complex component RRP41
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122397837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122397837
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122397837
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
122397837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
122397837
NCBI-ProteinID:
XP_043253213
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MIETDSSQDQNGLRSDGRRALELRQIRIKMGVFGQADGSSYIEHGNTKVLATVYGPHQPR
GSVGRGSGKVTKGIVNCQYSMAVFSLSSGERKRKPRGDRKSQERSLQLKHAMEAIIHLEL
YPRSQIDIYVEMLQVDGSDFCASVNAATLALIDAGIPIKNYAVGCTVTLINIPSLEDYDK
TLGTGVLDANYVEECAPGVTLSVVALPDSDTVSKDGLIVVAQGAGQRLHLSHLESLKARV
LYGCQDIKAILDHSVRHYLTEQSLPSLFHVTLD
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgattgagacagacagcagtcaagatcaaaatggattacggtcagatggtagacgtgca
ttagaattaagacaaattcgaataaaaatgggagtatttggtcaagctgatggtagttcc
tatattgaacatggtaatactaaggttttagccacggtgtacggaccacatcagccacgg
ggttctgtgggaagaggttcaggtaaggttacgaaaggcatagtaaattgtcagtacagt
atggcggtattcagtttatcttctggagaacgcaaacgaaaaccaaggggtgacagaaaa
tcgcaagaacgatcgctacagttaaaacacgctatggaagcaataatacatctagaatta
tatccacgttcgcaaatagatatttatgttgaaatgttacaagttgatggaagcgatttc
tgtgcatccgtgaatgcagctactctcgcattgatcgatgcgggaattcctatcaagaat
tatgctgtagggtgcaccgtgacattaatcaatataccatctctggaagattatgataaa
acactgggaacaggagtgttagatgcaaattatgtagaagaatgtgctcctggtgttact
ctctctgttgttgcattaccagatagcgatactgtatcaaaagatggcttaatagtagta
gcacaaggagcaggacaacgattacatttgtcacatcttgaatctttaaaagcacgtgta
ttatatggatgccaagacataaaagctattttagaccattctgttaggcattatttaaca
gaacaatctcttccttcactttttcatgttacattagattaa
DBGET
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