Colletes gigas: 122398052
Help
Entry
122398052 CDS
T07492
Name
(RefSeq) AF4/FMR2 family member lilli isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgig03021
]
122398052
Transcription machinery [BR:
cgig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122398052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AFF4_CHD
Motif
Other DBs
NCBI-GeneID:
122398052
NCBI-ProteinID:
XP_043253600
LinkDB
All DBs
Position
Unknown
AA seq
1439 aa
AA seq
DB search
MPSSGGYYDDRNPLLKGTLSSVDRDRLRERERQARAAMSVQAEQAAAGGGPDTRHHHHGH
HNHAHHHANPHAVAAPLFRAPVRVNPDARDSTTQQIQSKLGNYSLVKHLLDEPKRLIGIE
GVPPSPAPSPSPSSLRTSSSSVGTNSRSSPSAQEFKKPGGPRSGSSSSSSTSSSSSSSHQ
RGGFVKPADGKPPYGGRGGYPGQPVKHGSNNNDHRSHGLLPAKGPPPNSPGNGTLVGNSN
IGNSSGSSRLHCAGSRLSRLPLDNGTSSRPGPTENSADLENILKEMTMPPTPLTAIAQTP
RKELESKFTFNPVLAKLTEVPPPEATKPQRERHTANRLSADLEGDLRLSEDSDDETNKGT
TSRTTRGSRSPDLTVDLSTPLIPAMTPAPPPLAPMSPMGLSPVGPLSPTRPLSPPRPSSP
PAKQMTPERVLSPPAVSPLQSKVSTSPTIHQRPPSPPGQVPQSSGSASSSSDSGSDSGSD
SSDDSEDDTGAQPAKGPSTPPSLSPKNDNLIEEPPPAIEESKPRWNLSSFFNKTAVPHGE
QNSENKQPQDCNRRQNSPVATTVPRTHRDKTAALDWKLDEALKRTHNATMISLLSDSDHH
SDQDKSQLVAETRPQTEKPKVADARKRGRPRKPTKSPKAGHRTTEDTLKTGKPRSRTRGV
GSPVKKKQPISKATIATSDDGSDDRSQGASSASDSDRPTRVSPVVAAVISEKRRTRLSGS
SSEDENPTNVKHNSASEDDTTRWRRVPIKRSKPADSPKKQEKKKSPAKPKSRKSSSRVAN
VGGSDSDSESEVSVRNSRIQVARVPPRPRAPPTRTTSPENSDSDNSPGPKLQEEDAGNVQ
DKKKSDTLRRVFSTSVGGGKGGGKGGKGGKGGGKCGIYVEEYTTSANTPTGGESPYKRPS
SQASSIIQSFPPLTYVNGVSSLYCRIDLSRLPHISQLSRGQELRQRTELPDTRPSSRQAS
ALAAQAPRPPTPEEGEIVDTPPPQQLTTDTRSHHGDGLLGDGDHKNRAVIKGEPILDSKN
SCGGVVGGGASGGGSGASGTGSAPKRKRNPSCSSVSSLSIVCSVESKGKGTGEHKEKKKR
KRKHADVEAVLSRPSSSQVNHAKVSPIIFTRERRSYRVYDTATLDVAKRNVNIVEQQSDI
QPTNHEREEKPDTSLLPPPPPPQRVYYSYFNPQNEVLEDQDRWDQNQYLMEAKRLKHSAD
KECELTAQGMLYLEAVLCFLLTGNAMESDPLTERASFTMYKDTLSLIKYISSKFKSQQNN
SPESNIHNKLAILSLFCQSLIYLKLFKMRRHEVKENQKILTDYHQKPAQATPVQPEGQGT
PSLSPTPSPAGSVGSVGSQSSGYSSGELANRGAASGQPQVAPYVSVPLSAHNAMAKQNHH
FGLLLSCHDLWDQAYALVTDKHREFFIELDEKLGPLTLKSSLRDLVRYVQAGIKKLRDL
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgtccggtggatactatgacgacaggaatcctttgcttaagggcaccttatcc
agtgtggaccgggaccggcttcgggagcgggaacgacaggcccgcgcggcgatgtcggtc
caggccgaacaggcggctgcgggaggtggtcctgacaccagacaccatcaccatggccat
cataatcacgctcaccatcatgctaatccgcatgccgtcgccgctccgctgtttcgtgct
cccgtcagggttaacccggacgctcgggacagcacgacgcagcagatccaatcgaaactg
ggcaactattctctggtgaagcatctcctggacgagccgaaacggctgatcggcatcgag
ggtgtgccgcctagccctgccccgtccccgtcgccctcgtcccttcgaacgagttccagc
tcggtcggcacgaattccagaagctcgccgtccgcccaagaattcaagaaacccggtgga
cctcggtccggctcgtcgtcatcgtcgtccacgtcgtcctcgtcgtcgtcgagtcatcag
cgcggcggtttcgtgaaaccggccgacgggaagccaccgtacgggggcaggggcggctac
cccggacagccggtgaagcacgggagcaacaacaacgatcatcgcagtcacggtttatta
cccgccaaaggaccgcccccgaattcacccgggaacggtacgctcgttggcaattcgaat
attgggaattccagcggcagcagcaggcttcactgtgccggcagcagactgtccaggtta
cctctcgataacgggacgagttcgaggccaggtccgaccgagaattcagccgatttggag
aacattctgaaggaaatgaccatgccgcccacgcctctgacggccatcgcccagacgccg
aggaaggagctggagtcaaagttcacgttcaatcccgtgctggcgaagttgaccgaggtg
ccgccgccggaagccacgaagccccagcgcgagaggcacaccgccaacaggctatccgca
gatttggaaggggacctgagattgtccgaggacagcgacgatgagacgaacaagggaacg
acgtcgcggacaacgaggggaagcagaagccccgacctcacggtcgatttgtcgacgcca
ctgataccggcgatgacaccagcaccaccccctctggcgcccatgtcacccatggggttg
tcacccgtgggacccttgtcgccgacgaggccgctaagtccacccaggccgtcgtcgccg
ccggcgaagcagatgacgcccgaacgagtgttgtcgcctccggcggtcagtcctctgcag
tccaaggtctcgacgagcccgacgatccatcagaggccgcccagtccaccgggccaggtg
ccccagagttccggaagcgcgagctccagctccgattccggttccgattccggctcggac
agcagcgacgactccgaggacgacaccggcgcccaacccgccaaaggtccctcgacgccc
ccctccctgtcaccaaagaacgacaatctgatcgaggagccgccgcccgcgatagaggaa
tcaaaacccaggtggaacctcagctccttcttcaacaagacggcggtgccgcacggcgag
cagaactcggagaacaaacagccgcaggactgcaacaggcggcagaactcacccgtggcg
accaccgtgcccaggacgcacagggacaagaccgcggcgctcgattggaagctggacgag
gctctgaagaggactcacaacgcgacgatgatcagcctgctcagcgacagcgatcaccac
tcggaccaggacaagagccagttggtggcggagacgcggccgcagacggagaaaccaaag
gtggcggacgcgaggaaacgcggacgacccaggaaaccgaccaagagcccgaaggccgga
catcggacgacggaggacacgctgaagaccggaaagccacgcagcagaacgcggggtgtc
ggcagcccggtgaagaagaagcagccgatctccaaggcgaccatcgcgaccagcgacgat
ggcagcgacgacaggtcgcagggtgcttcgagcgcgtccgacagcgatcgtccgaccagg
gtgtcgccggtggtcgctgccgtgatcagcgagaagaggcggaccagattgagcggctca
tccagcgaggacgagaatccgacgaacgttaagcacaacagcgcctccgaggacgacacc
acgcgatggaggagagtaccgatcaagaggagcaagcccgcggactcgcccaagaagcag
gagaagaagaagagccccgcgaaaccgaagtccaggaagtctagctcgagggtggccaac
gtcggcgggtccgactcggacagcgagtccgaggtgtcggtgaggaacagccgtatccaa
gtcgcgagggtacctccgaggccaagggcgcctccaacgcggacgacttctccggagaac
tcggacagcgacaacagtccaggcccgaagctgcaagaggaggacgccgggaacgtgcag
gacaagaagaagagcgacacgcttcgcagggtgttctctacttcggtgggcggtgggaag
ggcggcggtaagggtggaaagggcggaaaaggcgggggtaaatgtgggatttacgtggag
gagtacacgacgtccgcgaatacgcctaccgggggtgaaagcccttacaaaaggccgtcg
tcgcaggcgtccagcatcattcagtcgttcccgccgctcacgtacgtgaacggcgtgtcg
agtttgtactgcaggatcgacctgagcaggcttccgcatatatcgcagctatccaggggt
caggagctgagacagcgcacggagctgccggacacgaggccgtcgtcgcgacaggcgtcc
gcgttggccgcccaggccccgcggccgcccacgccggaggagggcgagatagtggacacg
ccgccgcctcagcagctgaccacggacaccaggagtcaccacggggacggtttgttgggg
gacggcgatcacaagaatcgcgcggtgatcaaaggcgagccgatcttagactcgaagaac
agttgcggcggtgtcgtaggcggaggtgctagtgggggtggtagtggtgctagtggcacg
ggtagcgcgcccaagaggaaacgtaatccgagttgtagttccgtgtccagtttgagtatt
gtgtgttcggtggagtcgaagggtaagggtacgggcgagcacaaagagaagaagaagagg
aaaaggaaacacgccgacgtagaggctgttctatcgaggccatcttccagccaggtaaac
cacgccaaagtttcgccaataatctttacgcgcgagcgacgctcgtatcgcgtctacgat
acggcgacgctcgacgtagctaagcgtaatgtaaatatcgttgaacagcaaagcgatata
cagccaacgaatcacgaacgggaagaaaagcccgacacgagtctattgccgcccccgccc
ccgcctcagcgcgtctattattcctacttcaatcctcagaacgaagtgttggaggatcag
gataggtgggaccagaatcagtacctgatggaagcgaaacggctgaagcacagcgccgac
aaggagtgcgagctcacggcgcagggtatgctttacctagaagccgttctctgtttcctg
ctcactggcaatgccatggagtcggatcctctcaccgagagggcgtcgttcaccatgtac
aaggatactcttagtctcatcaagtacatctcctcgaagttcaagagccagcagaacaac
tcaccggagagcaatatacataacaagctggccattctaagcctcttttgccagtccctc
atatacttgaagctctttaagatgcgcagacacgaagtgaaagagaatcaaaaaattctc
accgactatcatcagaagcccgctcaggcgaccccggtgcaaccggaaggacaaggaacg
ccttctctgtcgccgacaccctcgccggccggttccgtgggttccgtcggtagccagagc
tccgggtacagcagcggcgagctggcgaaccggggggccgcttccggtcagcctcaggta
gcgccttacgttagcgttccgctcagcgctcacaacgctatggcgaaacaaaatcatcat
tttggtttgctgctgagttgtcatgatctctgggaccaggcgtacgctctggtaacggac
aagcatagagaattcttcatcgagctggatgagaaattgggacccctcacgttgaaaagt
tcgctgcgcgatctggtgcgttacgttcaggctggcataaagaagctccgagatctctga
DBGET
integrated database retrieval system
