Colletes gigas: 122398337
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Entry
122398337 CDS
T07492
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
cgig
Colletes gigas
Pathway
cgig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122398337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgig03036
]
122398337
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122398337
Chromosome and associated proteins [BR:
cgig03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
122398337
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
122398337
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122398337
NCBI-ProteinID:
XP_043254026
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MEIDGHDCQELDDEKLSELQVCEFVEHFPDKILSVRSEESILREASKEIEEIVKTNLQTK
GESQKINVDKNDADIGLDSFNQIKLEKQVLTGEITPFQAIAKQSNSSKAEGTSDKPTHLL
NLEKYLRQQAELTKQRKELKKRLTNSKVLCNEDQIVPLKKLKQSDTSSKECRGTVKKAKL
KSDKRKLVAEFEKTKGLNENDNINGETESTTSNQINDFNKESRHSRNTSTSCGTSKDTGR
QTAIESINNTEYVDIVNDSGSEYVPSDGQFDSEDEVESSSKKRKCVTKCVRAKRVLDDGD
EQIYRQRVEESGYPKNVPLHKIDNLLKVPQSIWKKLYKYQRVSVQWLWELHSRSLGGLLG
DEMGLGKTVQIIAFLAGLDCSELLSDGGRFRGLGPTLIVCPATLMEQWLKHFHDWWPTLR
VVVLHQSGTYDGNLEYLIHSLKYGGILITSYSGMLKHEDILVASQWHYVILDEGHKIRNP
QAKVSKAVKKFSTPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCAIPITRG
GYANATPLQEATALQVATMLRNAITPYMLRRTKNDVQHHVNLPEKNEQVLFCSLTNEQKQ
IYKNYLRSDDVSFVLHEKICMESGRHRARLLIALSVLRKICNHPDLFLYTSQIDSEEDID
ATEESLEKFGYWKRSGKMVVVRSLLKIWKKQGHRVLLFTQGRQMMHILESLVQNEEYAYL
RLDGTTPMTQRQETISLFNSDPSYFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPATDAQ
ARERAWRIGQNKSVTIYRLITAGTIEEKIYHRQIFKLLLSNKVLEDPRQRRLFKTSDLVE
LFNFNEPVDGHSSESDVLFRESKLTPTTTKFSSNKIEKMRRLAAMLSKNISQSAVNATAM
TENVTILKKRSTLSHDINSPSQDNLKHNNQVSKDSLMEQKTETESQTSKKSEDTLTSEIQ
KVTSEGNTEENKISGEIESNVLNMHDIVDNNNEIENKITLMVKCTNSDTKTDAIQDEQSS
SFSKSKIVEISEDSDQRNEITPSNKNESILKLNKTHHKHKRKKKSSQSEKNAVSALFEGE
RVSHLIGRRLGRSERDQTTSIEDDQYVLEKLFAKATVTSAFQHETVLSNSAYNSDNRTPM
QRLAQEAAQENMDSIRKSRKWCWRPTWDSASSKDD
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggagattgatggtcacgattgtcaagaacttgacgatgaaaaattaagcgaattgcaa
gtctgtgagtttgttgaacattttccagataagattctgtctgtgagaagcgaggaaagt
attcttcgcgaagcgtcaaaggaaatagaagaaattgtgaaaacaaatttgcaaacgaaa
ggggaatcacaaaaaattaatgttgataaaaatgatgctgatatcggtttagatagcttt
aatcaaataaaattagaaaaacaagttctgactggggagattacaccattccaagcaatt
gcaaaacagtctaattcatccaaagccgaggggacatccgacaaacccacccatttactt
aatcttgaaaaatatcttcgtcaacaagctgaacttaccaaacaaaggaaggagttaaag
aaaagattaacaaactcgaaagtactttgtaatgaagatcaaatagttccgttaaagaaa
ttaaagcaatcggataccagctctaaggaatgtaggggaactgttaaaaaagcaaaactc
aaaagcgataaaagaaaattagtagcagaatttgaaaaaaccaaagggttaaatgaaaat
gacaatattaacggtgaaacagagagtaccacgtctaatcaaatcaatgattttaataaa
gaaagtagacattctagaaatacatcaacttcttgcgggacttcaaaagatactggtaga
cagacagcaattgaaagtataaataatacagagtatgtagatatagtaaatgattctggg
agcgagtatgttccaagtgatggacaatttgattcggaagatgaagtggaatcatcatcc
aagaagagaaagtgtgttacaaaatgcgttcgtgcaaaaagagttttggatgatggggat
gaacaaatatacagacaacgagtggaagaaagtggttatccaaagaacgtaccattgcat
aaaatagataatctattgaaagttccacaatctatatggaaaaaattatacaagtatcaa
agagtatccgtgcaatggctctgggaattgcatagtcgttctttgggaggcttattggga
gatgaaatgggattaggaaaaactgttcaaattatcgcatttctcgcgggtttagattgt
agcgaattactttctgatggtggaaggtttcggggattaggaccaactttaatcgtttgc
ccagcgacattaatggaacagtggttgaagcattttcatgattggtggcctactctgaga
gtagttgttttacaccagtcaggaacttacgatggtaatctagaatatttaatacattcc
ttgaaatacggtggtatattaattacctcttattctggcatgcttaaacacgaagacata
cttgttgccagtcaatggcattatgtcatccttgatgaaggtcataaaataaggaatcca
caagcaaaggtcagtaaggcggtaaagaaattctcgacgccacatcgccttttattaact
ggcagtccaatgcagaactctttgaaagaattgtggtctctgtttgatttcattctacca
ggcaagttaggcactttgcctgcgttccttgaacattgcgcgattcctataacccgcgga
ggatacgcgaatgctactcctctgcaggaagctaccgcgcttcaggttgccacgatgctt
agaaacgcgattacaccgtacatgcttaggaggacaaaaaacgatgttcaacatcatgtt
aatctaccagaaaaaaatgaacaggtgttattctgtagtttaacgaacgaacaaaaacaa
atatataaaaattacttaagatccgatgatgtttcatttgttttacacgaaaagatttgt
atggaaagcggaagacacagagctagacttttaatagcattatcagtgctcaggaaaata
tgtaaccatcccgatttgtttttatacacgagtcaaattgattccgaagaggacatcgac
gcaacggaagaatcgttagagaagtttggctattggaaacgttctgggaaaatggtggta
gttcgatctcttcttaaaatttggaagaaacaagggcatagagtactactttttacgcaa
ggaagacaaatgatgcatattttagagtccttagtgcaaaacgaggaatacgcatactta
agactggatggaactactcccatgacacagcgacaagaaacgatcagtctgtttaatagt
gatccttcgtattttgtattcttgctaactacgcgcgttggcggattgggggtcaattta
accggagcaaatcgagtaattatttatgatccagattggaatccagcgactgatgctcaa
gcaagagaacgagcgtggagaattgggcaaaacaaaagtgtcactatttatagactcatt
acagccggtaccatcgaagaaaagatatatcacagacaaatatttaaattacttctttcg
aacaaagttttggaagatccacgtcaacgtagactattcaaaacctccgatttagttgaa
cttttcaatttcaatgagcctgttgacgggcattccagtgaatctgacgtattatttcga
gaatctaaattaacgccaacgactaccaaattttcgtcaaataaaatcgaaaaaatgcga
agattagctgctatgcttagtaaaaatataagtcaaagtgccgtaaatgctacggccatg
acagaaaatgtaactattctaaagaagagatctactttaagccacgatattaacagccct
agtcaagataatttaaaacataataatcaagtgtctaaagatagcttgatggaacagaag
actgagactgaaagtcagactagcaagaaaagcgaagatacgcttacttcagaaatacaa
aaagttaccagtgaaggtaacacggaggaaaacaaaatctcgggggaaatagaaagcaat
gtattaaatatgcatgatatagttgacaataataatgaaatagaaaataaaatcacatta
atggtaaaatgtacaaattctgatactaaaaccgacgcgatacaagacgaacaaagttca
tcgtttagtaaatctaaaatagtcgaaatttcagaagattcggatcaaagaaatgaaata
actccaagcaacaagaacgaaagtatattgaaattaaataaaacacatcataaacacaag
cgaaagaaaaagagttctcaatcagaaaaaaatgcagtttcagcattgttcgaaggagaa
cgcgtttctcatttaattggacgacgtcttggacgatccgaaagagatcaaactacctcg
atcgaagacgaccaatatgttttggaaaagctattcgccaaagcaactgtgacctcagct
ttccagcacgagacagtattatcaaattcagcctataattcggataacagaactccgatg
caacgattagcacaagaagcagcacaagaaaacatggatagtattcgcaagtctcgtaaa
tggtgttggaggcccacatgggattctgcgtcctctaaagatgattaa
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