Colletes gigas: 122398468
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Entry
122398468 CDS
T07492
Name
(RefSeq) ABC transporter A family member 1-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
cgig
Colletes gigas
Pathway
cgig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122398468
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgig02000
]
122398468
Transporters [BR:
cgig02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
122398468
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
SMC_N
RsgA_GTPase
AAA_30
ATP-synt_ab
MMR_HSR1
WYL_3
Motif
Other DBs
NCBI-GeneID:
122398468
NCBI-ProteinID:
XP_043254267
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MDLCGVYLSQLRAMLVRNLLLKKREKRKTTAEIFLPLCTLGVLIVVKVLPPNPNYPAMTT
QRQEGGIFETFNGYKNNTVAVVPNSTETLNFLNSMNVLWLSMWDYPGKLPLNFMVFDTKD
DLQAAYWRDPYSVPIAVIFEDSQPISQRLLYEIRTNPSYTNPPSPTELYSAPVTCRKDTS
HWMGGVLSIETGGSCPVNNYLHSGFLALQLIMDITKIRLDTGNNDVTVPDVKLEMFPKEA
FTADWMLAFRVVIPLFMVLALSQFVTYLLILIVGEKEKKIKEGMKIMGLKDSIFWLSWFI
IYSVFVLLLSAVGVILLFTLQMFQHTHFLPIFLLVVLYSFSIIMFAFMITPFFDKSRTAG
VLGNFAVTILSLMYFIQVFVNDSSSISFWVVSLLSPTGVALAMDKALVLDLQGEGVNFDN
LWSGPGIPFGGSLIMMTLDIFLYACLAYYFDSVIPSEYGIKRTPWFCFTPRFWWQRKAPR
SYLQVPSSNGESNSFIPGEETNRDIEPVVREMKGREAIRIVGLYKSYQKCRKPEIKAVDG
INLTIYEGQITAILGHNGAGKTSLFNILTGLTAPTAGTALIFGYDVRDSNDMQMIRSMTG
VCPQHDILFDLLTPREHLEFFAAVRGIPKSMIEHEVQKTLKDIDLYEQADTFAKYLSGGQ
KRKLSVGIAIIGDPKIIILDEPTAGVDPYSRRQMWSFLQSRRHGKVILLTTHFMDEADIL
ADRKAVISKGKLRCCGSSLFLKNKFGIGYHLTLVLEGNAREHAISRLVSSHVSKSEKARR
HGRELSFILPHNSVENFAPLFSAIEHEIRTRSSRLGISSYGVSMTTLEEVFLHLEKDEGT
ECTMDNLSKKMVRNRALSRSLSLQSKSTSYQSLQNEGVTVQNDGQGKGGGDLPDGVHSDR
NPPILGLGLDPIKIRPNFLQILYAMLRLRILRLFRNIQLLYFTIVAPLFLVVLGLYLNSI
QMVEIKMQSLRLNTDTYGNETKLLYANNTDYDITDLIEGISQDVKYIDEYYGNFANLLKI
APHMAALNINEYSLQKLDLTVAYNDTTQHSLPILINLLSNTYHRLTSDKSHLKPIEVKTH
PFQQTSQPQEFNIGTASSAVFIGMNFVLLPITLVVDMVYDREIKAKNQLRVNGLSFSMYF
LTYFIVLVGLMMFICLCILGIIFLFDVPSLQEIPALITLGGLLMLYCPSSILFSTCLSYI
FDKMDSAQSILPNISTFFGLIPFILVTILDMLGLSGTAAFVLHVIFSLLNTLYVPYAAVY
YVERVHLMCSINAACHHLTMSDYLTTEIILMAFGVLLHCPVWFFVLLLLDIKKSGGNVSD
IFKHFLRNGGSVGEEIMENSDIGEHEDADVKAERQKVFNLITSSSVQEPPVVLVQNLRKE
YRQRESGSCSCCSKQEEEANQIQRKVAVRNLSLAVEPGEVFGLLGHNGAGKTTTMKIIIA
EEAATRGRVQIGGHNINSNMAEAFRQMGYCPQHDAQWKNITVREHLECYAAIRGVPWGDI
SRIVDLYLTGLQIHEHADKQTQECSGGTRRKLSFAMAMIGGPKVVLMDEPSTGMDPRSKR
FLWDTILASFQGGRGAILTTHSMEEADALCSRVGIMVKGELRCIGSTQHLKNLYGAGYTL
EMKLLGGDCTPTTPSGDRITGLKEFVSSLFPDASLEESFADRLVFGVPQHAVNSLAECFM
QLEKAKLELDIEEYSFSQTTLEQVFLKFSHYDETNPGE
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggatttgtgcggggtctacttgtcgcagctgcgagcaatgctcgtgaggaatctgctc
ctgaagaaacgagagaagcggaagactacggcggagattttcctgcccctttgcacctta
ggcgtgttgatcgtggtaaaagtcttgccaccgaatccgaattaccctgcgatgacaacg
cagagacaagagggtgggattttcgagacgttcaacgggtacaagaacaacacggtggct
gttgttcccaactcgacggaaactttgaactttttgaactcgatgaacgtcctgtggttg
tcgatgtgggattatcccggcaagcttcccctgaatttcatggtgttcgacacgaaagac
gatctgcaagcggcatattggagagacccttacagtgtacccatagcagtcatcttcgaa
gactctcagcctatatctcaacgtctcctatacgagataagaactaatccttcgtacacg
aatccaccttcgccgaccgaattgtattccgccccagttacttgtcgaaaggacacgagc
cactggatgggtggcgtattgtcgatagagactggtggatcatgccccgtgaacaattac
ttgcattctggcttcctggcgttgcaattgataatggatattacaaagataagactagac
acaggaaacaatgatgtaaccgtaccggatgttaaactcgagatgttcccaaaggaagcc
ttcactgcagactggatgctggcctttagagttgttatacctctctttatggttctggct
ctttcgcaattcgtcacttatctcctgattctgatagtcggtgagaaggagaaaaagatc
aaggaagggatgaagataatgggcctaaaagattctatcttttggttgtcgtggttcatt
atctacagcgtctttgtcttgttgctatccgccgttggggtgatactactttttacactg
caaatgtttcagcacacacactttctaccgatattccttttagtagtgctctacagtttc
tccataatcatgtttgctttcatgataacgcctttcttcgacaagtcacggaccgccggt
gtactcggcaactttgcagtgacgatattaagcttgatgtactttatccaagttttcgtg
aacgactctagctcaatctcattctgggtagtctctcttctcagtccaacgggcgttgct
ttggcaatggataaggctcttgtgttggatttacaaggagaaggggtaaactttgataat
ctttggtcagggcccggtataccgtttggcgggagtctcattatgatgactttagacata
tttctgtacgcctgtttagcctactatttcgattccgtcatacctagtgaatatggaata
aaaagaactccctggttttgcttcacgccgagattctggtggcagaggaaggctccacgg
tcgtatttacaggtaccgtcgtctaatggagagtcgaactcctttatacctggcgaggag
accaatcgtgatatcgagccagtggtgcgagaaatgaaaggacgcgaagccattaggata
gtcggtctttacaagtcctaccaaaaatgtcgcaagccggagatcaaagccgtggatggc
attaacctgacgatttacgagggacaaattacagcaatactcgggcataacggcgctggg
aaaacaagtctcttcaacatactgactggtttaaccgcgcctaccgccggcactgccttg
attttcggttacgatgtcagagattccaacgacatgcaaatgattagaagcatgaccggc
gtttgtccacagcacgacatcctcttcgatcttctaacaccaagagaacaccttgaattc
tttgctgctgtacgcggcattccaaaatcgatgatcgagcacgaggtgcagaaaacttta
aaagacatcgatctgtacgagcaagcagatactttcgcaaaatatttaagcggtggtcag
aaaaggaaattgtccgttggtatcgctattattggcgatccgaaaattattatcctcgac
gaacccaccgccggggtagatccttattccaggcgacagatgtggtcttttttgcaatct
agacgtcacgggaaagtgattttattgaccacgcattttatggacgaggcggacatatta
gcggacaggaaagcggttatcagtaaaggaaagttaagatgctgcggtagttctctgttc
ttgaaaaataaattcggcattggatatcatttaacgttggtgctcgaagggaacgcgaga
gagcatgccatttccagattagtaagttctcacgtgtcgaagtcggagaaagcgagacgc
catggacgagaattaagtttcattctgccacacaattccgtcgagaattttgcaccactt
ttctcagccatagaacacgagattagaactcgatcgagtcggttgggcattagcagttac
ggggtctctatgactactttggaagaagtatttctacatctagagaaagacgagggcaca
gagtgcacgatggataatttgtcgaaaaaaatggtgcgtaaccgtgcactaagcaggtca
ttgtcgttgcaatccaaaagcacttcttatcaaagtttgcagaacgaaggtgtcactgtt
caaaacgatggtcaaggaaaaggcggaggagatttaccagatggagttcatagtgacaga
aaccctcctattctcggcctcggattagaccccataaaaatccggcctaatttcctacaa
atcctgtacgctatgcttcgcctaaggatactaaggctctttaggaacatccagttactg
tacttcactatcgttgcgcctctttttctggtagtccttggcctctatttgaatagcatt
caaatggttgagatcaaaatgcaatctcttagattgaataccgacacgtacggcaacgaa
acgaaacttttgtacgcgaacaataccgactacgacatcacggacttgatcgagggaata
agtcaagacgtgaagtacattgacgaatactacggaaactttgcgaacttgctcaaaatt
gcaccgcacatggcagctttaaatattaacgagtacagcctgcagaagctcgatttgacc
gttgcttataacgacactacgcaacattccctaccaattttgataaatcttttatccaac
acctatcataggttgacctcggacaaaagtcatttaaaaccaatcgaagttaagacacat
cctttccagcagacttcccaaccgcaggagttcaatatcggtacagctagctctgctgta
ttcatcggaatgaattttgttctgttgccaataactctagttgtagacatggtctacgat
cgagaaataaaagcgaagaatcaacttcgtgtgaacggtttgtcattctctatgtacttc
ctgacatacttcatcgtacttgtcggcctgatgatgttcatttgtctctgcattctcggc
attatatttctcttcgatgtgccttcgcttcaagaaataccagcactgatcaccctcggc
ggtcttttaatgctttactgtccgtcgtccattctattctcaacgtgtttaagttacatt
ttcgacaagatggattctgcccagagtattttgcccaatatatcaacattcttcgggcta
ataccctttatactagtcacgattcttgacatgttaggtctcagtggtaccgcagcattt
gttttacatgtaatcttctcgctattgaacacattgtacgtgccatacgctgcggtgtat
tacgtagaacgagtccacttgatgtgctccattaatgcggcttgccatcatttgactatg
tccgattatctgaccacagaaatcattttaatggcctttggcgtactcctgcactgtccg
gtgtggttcttcgtgcttttgttattggacattaaaaagagcggtgggaacgtcagcgat
atcttcaagcatttcctgcgcaatggtggttccgttggcgaggaaataatggagaactct
gacattggagaacacgaagacgcagatgttaaagccgagagacaaaaagttttcaatctg
atcacttcatcatccgttcaagaaccacctgtagttctagtacagaatttgagaaaagaa
tatagacaaagggagtcaggatcgtgcagttgctgctctaaacaggaagaggaagccaat
caaatacaacgaaaggttgctgtaaggaatctctcgttggcggtcgaaccgggagaagta
tttggtttattgggtcataacggcgctggaaaaactacgacaatgaagattatcatagca
gaagaagcagccacccgaggcagggtgcagatcggtggtcataacattaattccaatatg
gcggaagctttccgacagatgggatattgcccccaacacgatgctcagtggaagaacatt
acagtcagggaacatttagaatgttacgctgcgatacgcggtgtaccatggggagatatc
agcagaatcgtggacttgtatcttactggtctacaaatccacgagcatgccgacaagcag
actcaagaatgttcaggcgggactcgaaggaaacttagtttcgccatggcgatgatcgga
ggtccaaaagttgttctaatggacgaacctagtacaggaatggatcctagatcgaaaagg
tttttatgggatacaattctcgccagttttcagggtggcagaggagcaattttaacgact
cattcgatggaagaagctgacgccctgtgttctagagtcgggataatggtgaaaggagaa
ttgaggtgtatcggttctacccaacatctgaagaatctctatggtgctggatacaccctc
gagatgaaactgttaggcggtgactgtacgccgacgacaccctccggcgacaggatcacg
ggtctgaaggagtttgtttccagtctctttccagatgcaagtcttgaagaaagtttcgct
gacagattggttttcggtgttccccaacacgcagttaactcgctggccgagtgctttatg
cagttggagaaagccaaactcgagctggatattgaagagtacagcttcagccaaactact
ctggagcaggttttcctcaaattttcacactacgatgaaactaatccaggagaatga
DBGET
integrated database retrieval system
