KEGG   Colletes gigas: 122398474
Entry
122398474         CDS       T07492                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7 isoform X1
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
cgig  Colletes gigas
Pathway
cgig03020  RNA polymerase
cgig03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122398474
  09124 Replication and repair
   03420 Nucleotide excision repair
    122398474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cgig03021]
    122398474
   03019 Messenger RNA biogenesis [BR:cgig03019]
    122398474
   03400 DNA repair and recombination proteins [BR:cgig03400]
    122398474
Transcription machinery [BR:cgig03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     122398474
Messenger RNA biogenesis [BR:cgig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     122398474
DNA repair and recombination proteins [BR:cgig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122398474
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 122398474
NCBI-ProteinID: XP_043254281
LinkDB
Position
Unknown
AA seq 173 aa
MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVVAVTTIDNIGAGIIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAEIGPLSCFISHHSIPADMQFC
PNVNPPCYKSKEEDVIIQPDDEIRLKIVGTRVDATGIFAIGTLMDDYLGLVCN
NT seq 522 nt   +upstreamnt  +downstreamnt
atgttttatcacatatccttggaacatgaaattttgttacatcctagatattttggacct
caattgttagatactgtcaaacaaaaattgtacacagaggttgaaggtacctgcacagga
aaatacggttttgtagttgctgtaacaacaatagataatataggtgcaggtatcatacaa
ccaggacaaggatttgtagtatatccagttaaatataaagccattgtttttagaccattc
aaaggagaagtattggatgctattgtaacacaagtaaacaaggttggaatgtttgcagaa
attggtccactttcatgttttatatctcatcattcaatcccagcagatatgcaattttgc
ccaaatgtaaatcctccatgctacaaatcaaaagaagaggatgtaattattcaaccagat
gatgaaataagattaaaaattgttggtacaagagttgatgctacaggaatttttgccatt
ggcacattaatggatgattatttaggacttgtgtgcaactaa

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