Colletes gigas: 122398697
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Entry
122398697 CDS
T07492
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgig03041
]
122398697
Spliceosome [BR:
cgig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122398697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
ARM_TT21_5th
TPR_6
TPR_19
TPR_11
NRDE-2
PPTA
HAT
Motif
Other DBs
NCBI-GeneID:
122398697
NCBI-ProteinID:
XP_043254733
LinkDB
All DBs
Position
Unknown
AA seq
1041 aa
AA seq
DB search
MSSASGDESEITLNEPVRRTRSGRTRKTAVVAKKSPVKKLLARATRSPKKMQEIEEVEEE
EPILQEAVVVESIPENGVQRFGDIIIEQHAEDESTMLHLELEDSGDTTIHEINMNQNIQI
AEEQENVPDLDASVTQIVHSDAVPDHMIIEESSMDKVDILSEREQVDMEGQDMSNDDTNQ
HVLIDFHEVINDDGETITQVTEILETEEIESETVINDGTGIEVMEVDCQQEPQEVTDSVA
GKIATDTEMTELMEVTELTNTDVECSPENTMKKTEPDTEAVSEDELPTEAAAKEPETEAV
SDEELPAAAPADLGETESVSEDELPPDSEKKKKSGTKAMSKTPEKKSKTEGGNKRKLNAE
GEYDPSSPTSENNDETPAKKVALSAEADTGDSKQEAKPASPKKKTLPELEKYWKAVNEDP
SDFTGWTYLLQYVDQENDAEAAREAYTKFLERYPYCYGYWRKFADYEKKKGNPENVQRVF
DQGLKAISLSVDLWLHYINHCKTVYEKDEEKLREQYERAIQACGLEFRSDRLWESYIKWE
LEGKRLSKVTALYDRLLCTPTLGYISHFDAFQEFVSSNLPNRILSVDDFLALRAEVKALL
KSDDNTSTSAADDAPPGEEPPPHELPPTDEETRAIREKIISSRRKMHKANINAVAARWSY
EEGIKRPYFHVKPLERCQLKNWKEYLDFEIEQKDQNRIIILFERCLIACALYDEFWMRFV
RYLESLKGDNVDKIRDVYSRACMVHHPKKPNLHLQWATFEEGQDNFEKAASILENIDNVL
PNMLQVAYRRINLERRRGDLDKACALYENYISNSKNRTIANNIAVKYARFLCKVKNDVDK
AIKVLLKATEKDKDNPRLYLQLIDLGMQRAPVDTQEIIGYMDMFIEREHADLEQRVLFAQ
RKVEFLEDFSPDIRQVLKAHEQFQKCIKQAKERKKTKSDDTKTDTSPPKKVKIGDQSNIP
PPPSVSSQSSYQYSSGPSGPYQSQQQFQGGQYGGQGGYQQGYQQYPPPSDPNYANYQNWQ
YGQGGPQAYGPYNQWGSYNYY
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcaagtggtgatgaaagcgagatcactttaaatgaacctgtacggcgtacg
cgatcaggtcgtacgcgcaaaactgctgtcgtggcgaagaaatcccccgtaaagaaactt
ctggcaagggcaacacgttctccgaaaaaaatgcaagaaatcgaagaggtcgaggaggaa
gaacctatattgcaagaggcagtagttgtggaaagcattccagagaatggtgtacaaaga
tttggtgacattattattgaacagcacgcagaagacgaatcgactatgttgcacttagaa
ttggaagattccggcgatacaaccattcatgaaatcaatatgaatcaaaatatacaaata
gcagaggaacaagaaaatgtacctgatctagatgcatctgtgactcagattgttcattct
gatgctgtgccggatcacatgatcatagaagagagcagtatggacaaagttgatatttta
agcgaacgggaacaagtagatatggaaggacaagacatgagcaatgacgatacgaatcaa
catgtgctaatagattttcacgaagtcataaacgacgatggggaaactataacacaagta
acagagattttagagacggaggagattgaatctgaaactgttataaatgatggtactgga
atcgaagttatggaagtagattgtcaacaagaaccgcaagaagttacggatagcgttgca
gggaagattgcaaccgatacagaaatgacagaattaatggaagtgacagagttgacaaat
acagatgtagaatgctcgcctgaaaatactatgaaaaaaacggaacctgacacagaagct
gtgtccgaggatgaactacctaccgaagctgcagcaaaggagcctgagacagaagcagta
tccgacgaagaattaccagcagcagctcctgcggatttgggagagactgagtctgtttct
gaggacgaattaccgccggatagtgaaaagaagaagaaaagtggaacgaaggcaatgagc
aagactccggaaaaaaagagcaaaacggaaggtggaaataaacgcaagttgaatgcagaa
ggagagtacgatcccagttcgccaacatccgaaaataacgatgaaacgccggcgaaaaaa
gtggcgctctcggccgaagcggacactggggacagtaagcaagaggctaaaccagcatcg
ccgaagaaaaagacgttgccagagttagaaaaatattggaaagctgttaatgaggatcca
tcggatttcacaggatggacataccttcttcaatatgttgatcaagaaaatgacgcagag
gctgctcgcgaagcttataccaaatttttggagcgttatccatattgctacggttactgg
agaaagtttgctgattacgagaagaagaagggcaaccccgaaaatgtccaaagggtattc
gaccaaggtttgaaagctatttcgctcagtgtggatctttggctacattacatcaaccat
tgcaaaactgtctacgaaaaggatgaagagaaactacgagaacaatacgaaagagctatt
caagcatgtggtcttgaatttagatctgatcgtctttgggaaagttacataaaatgggag
ttggagggcaaacgtctcagcaaagtaacggctttgtacgaccgcttgttatgtacgcct
actcttggctatatatcccacttcgatgcatttcaagagttcgtttcctcgaacttacca
aatcgtattttaagcgttgatgattttcttgcgttgcgcgccgaagtgaaagcgcttttg
aaatcagatgacaatacgtctacttctgcagcagacgatgcaccgcccggagaagaaccc
ccaccgcacgaacttccacctaccgacgaagagacacgtgctatcagagaaaagattatt
agcagcaggcgtaaaatgcacaaagccaatattaacgcagttgctgctagatggtcgtac
gaagaaggtattaaaaggccatacttccacgtgaaacctttggaacggtgtcaattgaaa
aactggaaggagtacctagattttgaaattgaacaaaaagatcagaaccgaataatcatt
ttatttgaaaggtgtctgatagcgtgtgctctgtacgatgaattttggatgcgatttgtt
cgttatttggaatccttgaagggcgataacgtggacaaaattagagatgtatattccaga
gcttgcatggtgcatcatccaaagaaaccaaatttgcaccttcagtgggcaaccttcgaa
gaaggtcaggacaatttcgagaaagcggcaagcatacttgaaaacattgataacgtacta
ccaaatatgttacaagtggcatatcgacgaattaatttggaacgtaggagaggggacttg
gataaagcgtgtgcattatacgaaaattatataagtaacagtaaaaatagaactatcgca
aataacatcgctgtaaagtacgcgcgatttctgtgcaaagtaaaaaatgacgtggacaag
gcaattaaagtactactgaaggctacagaaaaagacaaagataatcccagactttaccta
caattgatcgacttggggatgcaaagggcccccgttgatacacaagaaataatagggtac
atggatatgttcatagaacgagagcacgctgatcttgaacagagagtacttttcgcgcaa
cgtaaagtagaatttcttgaagattttagccccgatattcgacaagtattgaaagcgcac
gagcaattccaaaaatgtatcaaacaggcaaaagaacggaagaagacgaaaagcgacgac
actaagacagatacttctcctccaaagaaagtgaaaattggtgatcaatcgaatatacca
ccaccgccttctgtcagctcccagtcatcataccaatacagcagcggcccaagcggacct
tatcaatcacagcaacaatttcagggtggccagtacggcggccaaggcggttatcaacag
ggttatcaacaatatccgcctccatccgatcctaattacgcaaattatcaaaattggcaa
tacggacaaggtggaccgcaagcgtacgggccatataatcaatggggatcttacaattac
tattag
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integrated database retrieval system
