Colletes gigas: 122398716
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Entry
122398716 CDS
T07492
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122398716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122398716
03016 Transfer RNA biogenesis [BR:
cgig03016
]
122398716
Enzymes [BR:
cgig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
122398716
Messenger RNA biogenesis [BR:
cgig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
122398716
Transfer RNA biogenesis [BR:
cgig03016
]
Prokaryotic type
tRNA degradation factors
122398716
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
YajC
RNase_H
Motif
Other DBs
NCBI-GeneID:
122398716
NCBI-ProteinID:
XP_043254767
LinkDB
All DBs
Position
Unknown
AA seq
767 aa
AA seq
DB search
MVLLRRNGLLKNRNLIFLCPKHHIKNGNKLHVESDSTKFTEHEAKVQLSDGRKMTFRTGK
YARFAGGSVVAQFGDTSVMSTVVRKDVLTNSSVLPLTVDYRQKASAAGRIPTNFFRREIG
YTQHEILASRVIDRSVRPMFNEGYCYETQLICNLLAVDGVHDPDVLSINAASVALSISDI
PWKGPIGAVRIGFIDNEYVINPSKRQLQHSSLNLIVACASKNLVVMAEGSANDIIEQDLR
KAIRVAAKDCQLIINSITNLQKKSGKCKTVITDNVETTNDMTETVREFSENEILNVFKCY
THDKISRDNAIIDLRTKMLNELANNDTKTAATATIAFNNLIKTVFRTAVFDTNKRCDGRK
LNELRDIQCEVELFKPVHGSAFFQRGQTQVLCTVTLDCIENALKMDTISMLTSGVKEKNF
FLHYEFPPYATNETGRVTGFARREVGHGALAEKGLQSVIPKDYPFAIRLTSEVLQSNGSS
SMASICGGSMALMDAGVPISSPVAGVAIGLICKFSNDTNQIEDYRILTDILGIEDYLGDM
DFKISGTKKGFTALQIDVKIPGIPMKIIMEGIHRATEAKNQILNIMNGVISSPRKDKTEN
KPVLETIEVPVYQRAKFIGIGGSNLRKILVETGVHIYSQVDNIYSIFAPNQDAMNEAREM
IDQLLTKESEPVLTFGDIYTGKITEIRDSGVMVTLYPNMPPALLHNSQLDRRKIHHPSAL
GLAVGQEIQVKYFGRDPVNGQIRLSHKVLQEPISCDQNLNIVEKMKK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggtattacttagacgtaatgggttgttaaagaatagaaacttaatttttctgtgtcca
aagcatcatattaaaaatggaaataagttgcacgttgaatccgattcgacgaaatttacg
gagcacgaggcaaaagtgcaattatctgacgggagaaagatgacgtttagaactggaaaa
tatgcacgtttcgcaggtggaagtgttgtcgcccaattcggtgatacatcagttatgagc
accgtagtgagaaaagatgtattaaccaatagttctgtacttcctctaactgtagattat
aggcagaaagcttcagcagcaggtcgtataccaacaaatttttttcgcagagaaataggt
tacacacaacatgaaattctcgcaagtagagtaatagatagatctgtacgtcctatgttc
aacgaaggatattgttatgaaacacaactaatatgtaatttgttggctgtcgatggagtg
catgatcctgatgtattatctattaatgctgcgtctgtggcgttaagcatttccgatatt
ccatggaaagggcccattggagctgtgaggattggatttatagataacgaatatgtaatc
aatccttcaaaacgccaacttcagcatagctcgttaaatcttattgttgcctgtgcatct
aaaaatcttgttgttatggcagaaggatcggctaatgatattatagaacaagatcttcgt
aaagctatacgagtagctgccaaagattgtcaattaattataaattctataactaactta
caaaagaaatctggaaaatgtaaaacagtaataactgataatgtagaaacgaccaatgat
atgacagagactgtaagagaattttccgaaaatgagatacttaatgtttttaaatgttat
actcatgataaaatttcacgagacaatgctattatagatttaagaaccaaaatgttaaat
gagttggcgaacaatgatacaaagactgctgcaactgctacaattgctttcaacaacctt
attaaaacagttttcagaactgcagtattcgatactaataagagatgcgacggtcgtaaa
ttaaacgaattaagagatatacaatgtgaagtggaattatttaaaccagttcatggttct
gccttcttccaaagaggacaaactcaggttttatgtacagtaactctggattgcatagaa
aatgctcttaaaatggatactatttcaatgctaactagcggcgtaaaggaaaagaatttt
tttctacattacgagttccctccgtatgcaactaacgagacgggtagagtaactggattt
gctcgtagagaagtaggtcatggagcattggcggaaaaagggttgcaatcggttatacca
aaagattatccatttgctataagacttacaagcgaagtattacaatcaaatggttcttct
tccatggcttctatatgtgggggcagtatggcactgatggatgcaggtgtaccgatatcg
tctccagttgccggtgtagctattggattaatatgtaaattcagtaatgatacaaaccag
atagaagattatagaatattaacggatatattaggcatcgaagactatctcggtgacatg
gatttcaaaatatccggtacaaaaaaaggatttaccgctttacaaatcgatgtaaaaata
ccaggaatccctatgaagataataatggagggtattcatcgagcaaccgaggcaaagaat
caaatccttaatatcatgaacggtgtaatatcatctccgagaaaagataagacagaaaat
aaaccggtactcgaaactattgaagtgcccgtgtatcaaagggcgaaatttattgggatt
ggagggtcaaacttgagaaaaatcttagttgaaactggagttcatatatactcgcaagta
gacaatatatattctatatttgcacctaatcaagacgcaatgaacgaagccagagaaatg
attgatcaacttttgacgaaagaatctgagccagtattgacgttcggtgatatttataca
ggaaaaataacagaaattcgtgattcgggggtgatggttacattatatcctaacatgccg
ccggcgttattgcataattcgcaattagatcgacgtaaaatccatcatcccagcgcgctt
ggattggcagtcgggcaagagatacaagtgaaatattttggacgagatccggtcaatgga
caaattaggttatcgcataaagtgttacaagaaccaatatcctgcgatcaaaatttaaat
atcgttgaaaaaatgaagaaataa
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