KEGG   Colletes gigas: 122398749
Entry
122398749         CDS       T07492                                 
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
cgig  Colletes gigas
Pathway
cgig03013  Nucleocytoplasmic transport
cgig04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122398749
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    122398749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgig03019]
    122398749
   04131 Membrane trafficking [BR:cgig04131]
    122398749
Messenger RNA biogenesis [BR:cgig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122398749
Membrane trafficking [BR:cgig04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    122398749
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_RIG_2nd WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_EIPR1 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 122398749
NCBI-ProteinID: XP_043254842
LinkDB
Position
Unknown
AA seq 367 aa
MFEAHSINAEHKDLIHDIAYDFYGQRMATCSSDQFVKVWDEDEHGNWHLTASWKAHSGSV
WKVTWAHPEFGQVLATCSFDRTAAVWEEIVGEGSGPGERGMRHWLRRTNLVDSRKSVTDV
KFAPKTLGLLLATCSEDGVIRIYEAPDVMNLSQWTLQHDISCKLQCSCLSWNPSLSRLHP
PMLAVASDDSNPSTGGKVFIYEYSESSRRWAKTEALQIQDPVHDIAFSPNLGRSFHTLAI
ATKDVRIITLKPILLDSVQSGSARFEITVAAQFSDHDFTVWRVCWNIMGTILASSGDDGC
VRLWKDNYINNWKCVAVLKGDGTSAQSAETPTAATPPNHSTGTQQTPSTTRYYKLGSISH
PNQVPWH
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgtttgaagcacatagcattaacgccgagcacaaggatttgattcacgacatcgcatac
gatttttatggacagcgaatggcaacatgttccagtgatcaatttgtaaaagtctgggat
gaagatgagcatggaaattggcatttaactgcatcttggaaagcccatagcggttctgta
tggaaagttacttgggcccatcctgaatttggtcaggttcttgcaacatgttcttttgat
aggactgcggctgtgtgggaagagatagttggggaaggatcgggtcctggagaacgtggt
atgagacattggcttaggaggacaaatttggtagattcccgaaagtctgttacagatgta
aaatttgcacctaaaacactaggccttttgttagccacatgtagcgaagatggggtgata
agaatatacgaagctcctgatgttatgaatttgagtcaatggactctgcaacatgatatt
agttgtaagctacaatgtagttgtctctcatggaatccttctctttcaaggctacatcca
ccaatgctagctgttgcaagtgatgattcaaacccatctaccggaggaaaagtttttatt
tacgaatattcagaaagtagtagaagatgggcaaaaacagaagcattgcaaattcaagac
cctgtccatgatattgcattctctccaaatttaggtagaagttttcatacattggctatt
gcaacaaaagatgtacgaataattacgttgaaacctatattgttggacagtgtacaaagt
ggttcggcacgttttgaaattactgtagcagcacaattttctgatcacgactttacggta
tggcgcgtatgttggaatattatgggaactattttagcaagttcgggagatgacggttgt
gttcgattatggaaagataattatattaataattggaagtgtgttgctgttttgaaagga
gatggcacttctgctcaaagtgccgaaactcctacagcagcaacaccacccaaccattct
acaggaacacaacaaacaccctccacaacaaggtactacaaattgggttccattagccat
ccaaatcaagtgccttggcattag

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