Colletes gigas: 122398770
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Entry
122398770 CDS
T07492
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cgig
Colletes gigas
Pathway
cgig03030
DNA replication
cgig03420
Nucleotide excision repair
cgig03430
Mismatch repair
cgig03440
Homologous recombination
cgig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122398770
03420 Nucleotide excision repair
122398770
03430 Mismatch repair
122398770
03440 Homologous recombination
122398770
03460 Fanconi anemia pathway
122398770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgig03000
]
122398770
03032 DNA replication proteins [BR:
cgig03032
]
122398770
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122398770
Transcription factors [BR:
cgig03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122398770
DNA replication proteins [BR:
cgig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
122398770
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
122398770
MMR (mismatch excision repair)
122398770
DSBR (double strand breaks repair)
HR (homologous recombination)
122398770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
CDC24_OB3
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
122398770
NCBI-ProteinID:
XP_043254875
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MYTLSEGSLDKIMNGIDIDKPILQILGHKKLASSSSGERYRLLVSDGKRINSFTMLATQL
NSMITDNVLTEFSICQINRYAISMVNNAGKQKRVMVILNIEVKFPGSEVGRKIGNPTNAE
VDSDSKVVQQSAQPPAQHQNDTLMQKQSTHQSSTNDISTTPIAALSPYQNRWVIRVRVVS
KSDIRTWSNSRGEGKLFSMDVLDESGEIRCTAFREMCDKYYDMIEIGKVYYISRATLKAA
NKQFNRLNNDYEMTLNGDSEIIPCHNTGDDIPSLQFNFIPISDVEKAEKNDIIDLLGVIK
SYGDLQIITSRNTGREMKKRDIHLVDESNTMVCLTLWGSQAEEFDRSDNPVLALKGVRVG
EFNGGKTVSTLSASVLQIDPDIPAAHRLRGWFNTVGRNTDVKTLSRTFGSDGGASGPWIT
FAEAKDMNLGRDGSDVYTVKATVNMIRVENAIYKSCPTENCKKKLIDQANDMYRCEKCDK
EYPNFRYRLLLSLNLADWSDNQWVTMFNDEAEKILGITAQEFGELQENDNDTYLEKFGDT
TFKSFIFKLRVKAEIFNDENKLKATCTNLTPIDHKAYNTHLISLIQDLAGIGKA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgcttagcgaaggctcgttggataaaattatgaatggcatcgatatcgataag
ccaatattacaaatattaggtcataagaagttagcaagctcaagtagtggagaacgttat
aggctgcttgtatctgatggaaagaggataaactcgtttacaatgctagcaacacagtta
aattctatgataacagacaatgtattgactgaattttctatttgtcagataaacagatat
gcgataagcatggtaaacaatgctggaaaacagaaacgtgtaatggtgatattgaatata
gaagtaaaatttcctggcagtgaagttggacgtaaaattggaaatccaacaaatgcagaa
gttgatagtgattctaaagttgtgcagcaatctgcacagccacctgctcaacaccaaaat
gatactctgatgcaaaagcagagcacacaccagtcttctactaatgatatatcaacaact
ccaatcgctgctttgagtccttatcaaaatagatgggtcataagagtacgcgttgtcagt
aaatctgatatcagaacatggagcaattcgcgcggtgaagggaaattgttttctatggat
gttcttgacgagagtggagaaattagatgtacagcattcagagagatgtgtgacaaatac
tacgacatgatcgagattggaaaagtttattatatttctagagctacattaaaagcagca
aataaacagtttaatcgtttaaacaatgattatgagatgactctaaatggagattcagaa
atcattccatgtcataacactggtgatgatattccttcccttcaatttaattttatacca
ataagcgatgtggagaaagcagagaaaaatgatataatagatcttttgggtgttattaag
tcatacggtgatttgcaaataataacatcacgcaacacaggtagagaaatgaaaaagaga
gacattcatcttgttgatgaaagtaatactatggtttgtctcacattgtgggggtcgcaa
gccgaagaatttgatagatcggataatccagttttggctctcaaaggggtacgtgttggt
gaatttaatggaggaaaaactgtgtctactctgagtgcgtcggttcttcaaatcgatcca
gatatcccagcagcgcacagactccgaggttggtttaatactgtcggtcgtaatacggac
gttaagacgctttcaagaacatttggaagtgatggtggcgcaagtggaccatggataaca
tttgcagaagcaaaggacatgaatttgggtagggacggtagtgacgtatacacggtaaag
gcgaccgtgaatatgattagagttgaaaatgccatctacaagtcttgtcctactgagaat
tgtaaaaagaagttgattgatcaagcgaatgatatgtatagatgtgaaaagtgtgataaa
gaatacccgaacttcagataccgtttactcctgagtttaaatttagccgattggtcagac
aatcaatgggttacaatgtttaatgacgaggcagaaaagatattgggcattacagctcaa
gaattcggagagctacaagaaaacgataatgatacatatcttgaaaaattcggtgacaca
acatttaagagttttatatttaaactacgagttaaagcggaaatattcaatgatgaaaat
aagttaaaagcaacgtgtactaatttaactccgatagatcataaagcgtataacacccat
ttaataagtctaattcaagacttagctggaattgggaaagcttga
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integrated database retrieval system
