Colletes gigas: 122398856
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Entry
122398856 CDS
T07492
Name
(RefSeq) homeobox protein six1a-like isoform X1
KO
K15614
homeobox protein SIX1
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgig03000
]
122398856
Transcription factors [BR:
cgig03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
122398856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
122398856
NCBI-ProteinID:
XP_043255032
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MMAYGGTAGNGGAMGPTSAGADVLGSTGDYSPQGTPTPLTGHAAGSVEVSTYGPGTGPTS
YSPQDSPASSAGGGGGGSSNGQLPSFGFTQDQVACVCEAMVSSVQVLQQAGSVERLGRFL
WSLPSCTRLHRHESVLKAKAIVAFHRGHFKELYRILESHTFSLHNHQKLQALWLKAHYIE
AERLRGRPLGAVGKYRVRRKFPLPRTIWDGEETSYCFKEKSRSVLRDWYATNPYPSPREK
RELAESTGLTTTQVSNWFKNRRQRDRAAEHSGQREDKAHGGGLGDSSSESGDEKRQAVGQ
QQQQQQQPSACAVQQQQQQQQMVEHQQTSGMYQLPPPVSVSSPHSYHQGHGSTLSHPHTP
THHMQHHDTSSESGDDKRNLHHQLQHHLQVGAHGTHGLVHPTATLPPPPPSCAQQKSQLD
YMQYYSPQDYLIGTPTSADLQKSLPHTATTMQMGAIAPSMGGLSPMGPSTMLPNTMQGVN
TMNTMSMNGMGMGTYQGMGAMGMATSHSTYHSGLVLGDYHSL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatggcctacggaggaaccgccggaaacgggggcgcgatgggaccgacgtctgctggc
gcggacgttttgggctcgacgggtgattacagcccgcaggggacacctacgccgctcacg
ggacacgcggcaggatccgtcgaggtgagcacctacggtcctggaacaggaccgaccagc
tacagtccccaggatagtccggccagctccgccggcggcggcggtggcggcagtagcaac
ggacagcttcccagtttcgggttcacccaggaccaagtcgcctgtgtttgcgaggcgatg
gtgtcgtctgtccaggttctccagcaggcgggatccgtggagaggcttggcaggtttctg
tggtccctgccgtcgtgcaccaggttgcaccggcacgagagcgtcctgaaagccaaagcg
atcgtcgccttccatcggggacacttcaaggaactgtacaggatcctggaaagtcacacg
ttcagcctgcacaatcatcagaaactgcaggctctctggctcaaagcccattatatcgag
gccgagagactgagaggaaggcccctcggggcagttgggaaatatcgcgttcgacgcaaa
ttcccactgcctagaacgatttgggacggcgaggagacatcctattgtttcaaggagaag
tccaggagtgtgttgagggattggtacgctaccaatccgtacccgtcgccccgcgagaag
cgagaattagccgaaagtacgggcctaaccactacgcaagtcagtaattggttcaagaac
cgaagacaaagggatcgtgcagcggaacacagcggccagagagaggacaaggcccacggc
ggtggactcggggattccagcagcgagagcggcgacgagaagagacaggccgtcggccag
caacagcaacagcaacagcaaccctcggcgtgcgccgtccaacagcaacagcagcagcaa
cagatggtggagcaccagcaaacgtctggcatgtaccaacttccgcctccggtctccgtt
tccagtcctcactcgtaccaccaaggccacggctcgaccttgagccatcctcacacgccg
acgcaccatatgcagcaccacgacaccagcagcgagagcggcgacgacaagcgaaatctt
catcatcagctgcaacatcatcttcaggtcggtgctcacggtactcacggcttggtacat
cccacggcgaccttgccgccgccgccacccagctgcgcccaacagaagagccagttggac
tatatgcagtactatagtccacaggactacctgataggcacgccaacctcggcggacctc
caaaagtccctgccccacacggccacgacgatgcagatgggtgctatagctccttccatg
ggtgggctgagcccaatgggtccatcgacgatgttgcccaacacgatgcagggcgtgaac
acgatgaacaccatgtcgatgaacggcatggggatggggacttaccaggggatgggtgcc
atggggatggccacgtcgcacagcacttatcacagtggtctagtgctgggcgattatcat
tcgttgtga
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integrated database retrieval system
