Colletes gigas: 122398967
Help
Entry
122398967 CDS
T07492
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122398967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122398967
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122398967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122398967
NCBI-ProteinID:
XP_043255172
LinkDB
All DBs
Position
Unknown
AA seq
220 aa
AA seq
DB search
MTEEAAESELVLRPMNCELNQLSMPDGSAMFMQGDTAVVAGVYGPIEAKPQKMIYNKAFV
DVSYVPIKGLAKVDDRMTELYIKETCEAAIITTFHPATAICISIQELDDSGGLLACTINA
ACLSLINAAVPMKFTVAAVSCMIEDDTGNIILDPDNVQLQDARAEFTYGFDSMKKNIVCC
YTAGRFTETEVLETMNKCKEASQYVFDFYRNLVKKYANVI
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagaagcggcggaaagtgaacttgtgttacggccaatgaattgtgaattgaat
caactttctatgcccgatggatcggcaatgttcatgcaaggtgatactgcagtcgtcgca
ggtgtctatgggccgatagaagcaaagccacaaaaaatgatttacaacaaagcatttgtt
gatgtgtcgtatgttcccataaaaggactggctaaggtggatgacaggatgacagaacta
tacataaaagaaacatgcgaggctgcaataattactacatttcatccagcaacagccata
tgcatcagtatacaagagctggatgattccggtgggttactagcctgcacaatcaatgct
gcctgcctatcgcttattaatgctgcagttcccatgaaatttactgttgcagcagtgagc
tgtatgatagaagacgatactggtaatattatactagatcctgataatgttcagttacag
gatgctagagcagaattcacatatgggtttgacagcatgaagaaaaatattgtatgttgt
tatactgcaggtcgcttcacggaaactgaagttttagaaacgatgaataagtgtaaagaa
gctagccaatatgtgtttgatttttatcgaaatcttgtaaaaaaatacgcgaatgtaata
tag
DBGET
integrated database retrieval system