Colletes gigas: 122398987
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Entry
122398987 CDS
T07492
Name
(RefSeq) DNA polymerase iota
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
cgig
Colletes gigas
Pathway
cgig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122398987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122398987
Enzymes [BR:
cgig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122398987
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
122398987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
HHH_5
DNA_pol_lambd_f
IMS_HHH
VWC2L_1st
DUF1805
HHH_2
Matrilin_ccoil
Motif
Other DBs
NCBI-GeneID:
122398987
NCBI-ProteinID:
XP_043255198
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MDSIDFDTIIRHPRTIIHIDVDCFYAQVEMLRHPELEGKPLGVQQKNIVVTSNYLAREYG
IKKCMSVQEALQLCPGLALVNGEDLTNYRHFSAKILEILHQFTPLVERLGFDDNFMDVTS
IVQKYMNSGNDSDLNISISMEDESPVGEVFGPSEEECPCGCHARLIFASKIAAEIRKRIH
KELHVTCSAGIAHNKLLAKLIGSLHKPNQQTLVFPCSGPMLLSSIGSVSKIPGVGQKTTQ
LLVSNNIKTVDDLRKTSLESLEMKLGVDLAKKLKDNAEGIDETVVKPTGKKQSIGLEDGF
KSVSLVAEVESRLGVLLRRLTELAMEDGRIPIAMRITVRKHDFNKPTSGKRETRQCALPK
HLLPSTKSGVYDHAKMLSLAMKLFHRTVDVSKPFHLTLLGVAFTKFEERSSGRNSITSFL
RKQVAVQSVLDISSEEGISDISLGSPMSINQDSNDGSAMSTTSSPVSKSVGVNNQCAEDD
LLNEIEPLPKKTRLEVWLSGRRESPSNEMADLRLSPSSPMQLSPKIDAAVLKSLPIDIQR
EVTRTWPTTSKPKPNNILKYFIANK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggattccattgattttgatacaattatacgacatccaagaactataattcacatagat
gttgattgtttttatgctcaagtggaaatgctaagacatccagagctagaaggcaaacca
ttaggcgtacaacaaaagaatattgtagtaacgagcaactatttggcaagagaatacgga
attaagaaatgtatgtccgttcaggaagctttacaattatgtccggggctggccctggtg
aatggggaagatttaacaaactatcgtcacttctctgctaagatactggagatattgcat
cagtttactcccttggtcgagaggttaggtttcgacgataactttatggatgtgacgtct
atcgtgcagaaatatatgaattctggaaatgattctgatctaaatataagtatttctatg
gaagatgagagtccggttggagaagtatttggcccgtccgaagaagaatgtccatgcggt
tgccatgcccgattaattttcgcttcgaaaattgcagcggaaataagaaaacgaattcat
aaggaattgcacgtcacatgcagtgctggaatagcgcacaataaacttctagcaaaactg
atagggtcgttgcataaaccgaaccaacagacattagtattcccgtgcagcggaccaatg
ttgttatcatcgataggatctgtgtctaaaataccaggtgttggacagaaaactacacag
ttgttggtatcgaataatataaaaacagtggacgacttgcgtaaaacgtctttggaaagt
ttggaaatgaaacttggcgttgatttggcgaagaaattaaaagacaacgcggaaggtata
gacgaaaccgttgtgaaaccgactggaaagaaacagtctataggtttagaggatgggttt
aaaagtgtttctttggtagccgaagtagaatcacgacttggagtacttttgagaagattg
acggaattagctatggaggatggaaggattcccatcgctatgagaataacggtcagaaag
cacgactttaataaaccaacttctggcaaaagggaaactcgtcagtgtgctttaccaaag
catctgttgccttccacgaaatccggcgtttacgatcacgctaaaatgctatcgctggca
atgaaactttttcatcgcactgtcgacgtctctaaaccattccacttaacattgttaggc
gttgctttcacaaagttcgaagagagatcttctggcagaaatagtattacgtctttcttg
cgaaagcaagttgccgttcaatccgtcttggacataagttcggaggaaggtatttccgac
atcagtcttggatcaccgatgagtataaatcaagatagtaacgatggttccgcgatgagc
accacttcgtcaccagtttcaaaatcagttggcgttaacaatcagtgtgcagaggacgac
ctgctgaacgagatcgaacctttaccaaaaaagaccagattggaggtatggttaagtggc
cgcagagaatctccgagcaacgaaatggcagatctcagactcagtccttcgtcacctatg
caattgtccccgaaaatcgacgcggcggttctcaaatcattacccatagacattcagagg
gaagtcacccgtacatggccgacaactagtaaaccaaaaccgaataatatacttaaatat
ttcatagccaataagtga
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