Colletes gigas: 122399004
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Entry
122399004 CDS
T07492
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgig04131
]
122399004
Membrane trafficking [BR:
cgig04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
122399004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
SGL
EGF_LRP2
EGF_3
DUF3105
PLDc
Motif
Other DBs
NCBI-GeneID:
122399004
NCBI-ProteinID:
XP_043255233
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MGRSCRLLVLSPLHLLTIFGFLAAADAFSTDRNSCSLKQFRCANNKCIPMLWVCDSTDDC
LDNSDETAEECTGIHKCTETEFKCTNGKCIPGRWHCDGDPDCPDRSDEDPTVCRTKNCTA
EQFTCHSGNGECVALTWMCDSNPDCSDASDEAECNDTCRSDEFTCANADCIQQSWVCDND
DDCGDGSDEKDCKPTTCQPDTEFACSENVCITSRWRCDGDIDCPNKSDEIGCKDFNDKGS
SHCSKKEFDCGNDFTCIHQSWVCDGGKDCPNGADESPERCHNVTCRLDQFQCGDRRGCIS
GHLYCNGKAECADGSDEKNCTSKAVACDPSTQFECSEGSCIPINNVCNKNRDCLGWEDES
AELCGVNECQKNNGGCSQICIDLPIGFRCECSAGYRLVDNRTCDDIDECLEPGSCSQFCL
NEKGSFKCSCAAGYLKDPRNHSRCKAAEGHASLLFTRRHDIRKVALDRQEMTEIVNNTKK
ATALDFVFRTGMIFWSDISEQKIYKAPIDEGNERSVVIDDGLTTSDGLAVDWIYNHIYWT
DSGKSTIELANFEGNMRKTLIQDRIQKPRAIALNPLDGWMFWTDWSNEARIEKAGMDGSH
RTIIVDNDVKWPNGLTLDLIGKKIYWVDAKLNIIGSCNYDGTGRRTVLYSPDSLRHPYSI
TTFEDYVYWTDWDKKTIFTANKFTGKEVEAVTSVQTLEHPTVVHVYHPYRQPDGMNQCQA
VNGHCSHLCLPAPRINSKSPLLSCACPDGLRLLPDGLMCVEKVTTTVAPTTQGISNPFKR
LESFNVTTTTINPSPSTGGDEKVSLATESTDDGLVAGIVIGVASLGLLFFALGAVLGYRH
YLHRNVTSMNFDNPVYRKTTEDQFSLEKNRFPLPTATVGEEAQEPLTSPGTNDYV
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaagctgtcgtctgctggtactttcgccgctgcacttgctgactatattcggc
ttcctcgcggcggctgatgctttctccactgacagaaactcttgttccttaaagcaattt
cgatgtgcgaataataagtgtataccgatgttgtgggtctgcgattccacagacgactgt
ctagacaattccgacgagaccgccgaggaatgcacaggtatacacaagtgcaccgagacg
gagttcaagtgcacgaacggcaagtgtatacccggaaggtggcattgcgacggcgacccg
gactgtcctgacaggtcggacgaggatccaacagtttgcaggacgaagaattgcacggcg
gaacagttcacgtgtcactcgggaaatggcgaatgcgtggcacttacatggatgtgcgac
agcaacccagactgttcggacgcttcagacgaggctgagtgcaacgacacttgtcggtcc
gacgagttcacgtgcgcgaacgcagactgcatccagcaatcttgggtatgcgataacgac
gacgactgcggagacggcagcgacgaaaaggattgcaagccaaccacttgtcagcccgat
acggagttcgcttgctcggaaaatgtttgcataacgtcccgctggaggtgcgacggcgac
atcgattgtccaaataagtccgacgaaatcggatgcaaggacttcaacgacaagggatcg
agtcattgcagcaaaaaggaattcgattgcgggaacgatttcacgtgcatccaccaaagc
tgggtctgcgacggtgggaaagattgcccaaacggtgcggacgaatcacccgaacggtgc
cataatgtcacgtgcaggctcgatcagtttcaatgcggagatcgtcgcggttgcatatca
ggtcacctgtattgcaacggtaaagcggaatgcgcggatggtagcgacgagaaaaattgt
acgagcaaggcggtcgcctgtgatccctcgactcagttcgaatgcagcgagggctcgtgt
attcccataaacaacgtgtgcaataaaaatcgcgactgcctcggttgggaagacgaaagt
gccgagctatgcggcgtgaacgagtgtcagaaaaacaacggcggatgttcgcaaatttgc
atcgatttgcccattggcttccggtgcgagtgcagcgcagggtacagattagttgacaat
cgaacgtgcgatgacatagacgaatgcctggaaccaggcagttgttcccagttctgtttg
aacgaaaagggtagctttaaatgcagctgcgctgcgggctaccttaaagaccctaggaat
cactctcgttgcaaagcagcagaaggtcacgcgagtcttctcttcaccagaaggcacgac
ataagaaaagtagctctggaccgtcaagagatgacagagatagtgaacaatacaaaaaaa
gcaacagctttagattttgtgttccgtacgggtatgattttttggagcgacataagcgag
caaaagatctacaaagctccgatagacgagggtaacgaacgttcggttgtcatcgatgac
ggtctgacaacgtcggatggacttgctgtcgattggatatacaatcatatttattggacc
gattctggcaaaagtaccatcgaattggcaaacttcgagggcaatatgagaaaaactctt
atacaagaccgtatacagaaaccgagagcgatcgctttgaatccattggatggttggatg
ttttggacggattggagcaacgaggctcgtattgaaaaagctgggatggacggttctcat
cgaacgattatagttgataacgacgtgaaatggccgaatggcttgactttggatttaata
gggaagaagatttattgggtggatgctaaattgaatataataggatcgtgtaattacgat
ggcacgggtagacggacggttctttattctcccgattcgttgaggcatccgtacagtatt
acaaccttcgaggattatgtgtattggaccgattgggacaagaaaacgatattcacggcg
aataaatttaccgggaaagaggtcgaagctgtcacgtccgtccaaacactcgaacacccg
acagtcgttcacgtgtatcatccgtacaggcaaccagacggaatgaatcagtgtcaagcc
gtgaatggtcactgtagccacttgtgcttacctgcgccaagaattaattcaaagtcacct
cttcttagttgcgcttgcccggatggcctaagactattacctgatggtttaatgtgtgta
gaaaaggtaactacaactgtagcacctacaacgcaaggaattagtaacccattcaagaga
cttgaatccttcaatgttactactacaactatcaatccatcaccctcgacaggcggggat
gagaaagttagtctcgcaaccgaatcgacagacgatggtttagtcgctggtatagtgata
ggcgtggcgtccttaggactgttattctttgcattaggagcagtgttaggctacaggcat
tatctccatcgtaacgttacgagtatgaatttcgataatcctgtgtataggaaaaccaca
gaagatcagttcagtttggaaaagaacaggtttccactccccactgctacagttggagaa
gaggctcaggaacccttaacgagtcctggaactaacgattacgtttaa
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