Colletes gigas: 122400016
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Entry
122400016 CDS
T07492
Name
(RefSeq) laminin subunit gamma-1 isoform X1
KO
K05635
laminin, gamma 1
Organism
cgig
Colletes gigas
Pathway
cgig04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122400016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Motif
Other DBs
NCBI-GeneID:
122400016
NCBI-ProteinID:
XP_043257119
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MTRGRHKRMLILVAISLVVVLADPEPSDELYSRFQKYRDEDKCYDDTGKPQRCIPPFENA
AFNVLMEATNTCGQDRPTEFCKQTDVQTKSCEICRYGDHPAKYLTDHDNNDDATWWQSET
MFEGIEYPNQVNLTLPLDKTFDITYVRVLFESPRPESWGIYKRRNEESPWEPYQFYSATC
RDNYGLPDSKETVEGDDTRVLCTSEYSDISPLTKGTVAYSTLEGRPSAYYFETNTALQEW
VQATDLRITLDRQNTFGDEVFGDDHVLKSYYYAIADVAVGARCACNGHAGECVNSTSVDG
RIRRVCRCEHNTAGPDCNECLPFYNDAPWGRATTTNAHECKPCNCNGYSERCYFDKELYK
ATGHGGHCLDCRANRDGANCERCRENFYQRPEDNYCVTCNCNEIGSRSLQCNSEGKCQCK
PGITGDKCDHCATNYYNFGSYGCTSCECDVAGSLSNTQNCNPASGTCICKENVEGKRCRV
CRPGYFNLALDNEFGCTPCFCYGHSSVCRPATGYSKLVIESMFVRAAERWTATVAGNSIP
LHYDPLTQTVSATALDRDNVYFVAPDRFLGDQRASYNQDLSFTLRIGEVGPAPTARDLIL
EGGNGEQITQPIFGQNNRLPTVTPQEYHFKLHEHPNYGWEPRLSSRAFMSILSNLTAIKI
RGTYTHQGRGFLDDVKLETAHRGAAGESADWIEHCQCPHGYVGQFCESCAPGFHHDPPNG
GPFALCVPCNCNNHADICEAETGQCICQHNTAGSNCELCKRGYYGHPLKGTPNDCNPCPC
PDNGPCILLGNKPDPICSECPSGRTGPRCETCSDGYYGNPEKGVDCRSCDCNNNIDLNAV
RNCDHESGECLKCVNNTAGFHCEECLAGYYGDALSDRKEDGCKLCQCYPPGTIELDDGRV
APCEQLTGHCRCKPHVIGRNCDKCEEGYYHILSGEGCAPCNCDPEGSYNRTCNPINGQCE
CRPGVTGQHCDACLPYQYGFSREGCKSCECDNIGSQDLQCDTSGQCPCLTNVEGRRCDRC
KENKHNRQNGCVNCPDCYNLVQDAVDNHRERLAELENTLKKINSSPTVIKDSDFEKELKN
VHDRVKNLLKIAKQGSGNENKTLVEQLDELHDQLNEIGQISQTVDLTISDANDTTAEGLT
SIEEAERVLDKIHAQLTEAEDYLATDGASALFEAKVLAEQVGQQNKQMTATAQEARVLAD
LNVNEAKKIHALAEQARSTTIEAYNLAKTAIAKSTNLTEDIRGLENKLELLERSMNEVQN
LTSIAANKSSAVSQEAIDSLILNVALPPVDIQQLQSQVKEVNNEGLRLKEEAQLLIDRHE
NLITEMVEKIKKSEELLDGAQVQQAATADLLAELDRANEKANDAVKRGDQTLKEAQETLK
KLGEFDAEVKRERIKAQDALKGIDDILMMIADARRQAMQAEEVLIGSENNAKNARKIAQN
AQTYAEEASAKANVIRTEANKTKVEALRVGNEAEKLHLRVDTTDSMMTKYEIQIDQDTNI
ATEANHKIGQTKINVTLATQQVDKALAEVAEIIKDLDNLPKINETDLNDLEERLVAAEKE
IAVANLDQRIRALTDAKNLQTQWVKNYEDEISRLRIEVGNIGDIRKVLPVECHKRVRLEP
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgaggaagacacaagaggatgttgatactagttgctatctcgttagtggtggta
cttgcagatcccgaaccttcggatgaactttatagtcggtttcaaaaatatcgcgacgaa
gacaagtgttacgatgacaccggaaagccgcagaggtgcataccacctttcgagaacgca
gctttcaatgtgctcatggaagcgacgaacacgtgtgggcaggatcggcctacagaattt
tgtaaacagaccgacgttcaaacgaagtcctgcgagatttgtcgttatggcgaccatccg
gccaagtatcttaccgatcacgataacaacgacgacgcgacctggtggcagtcggaaacg
atgttcgagggcattgaatatccaaatcaagttaatcttacgcttcctttagacaagaca
ttcgatataacgtacgttcgagtgcttttcgagtcgccacgtccagaaagctggggcatc
tacaagaggagaaacgaggagtcaccatgggagccttatcaattttattccgcgacttgc
agagataattatggcttaccggattcgaaggagactgtggaaggggacgacacgagggtg
ctgtgtacctcggaatattccgatatatcacccttgacaaagggcaccgtcgcatattcc
actctggaaggtcgaccttcggcttactacttcgaaactaatacggcgttgcaggaatgg
gtacaagcaaccgatttaagaattactctggacagacaaaacacgtttggagacgaagtg
tttggtgatgatcacgtattgaaatcttattactatgcgatcgctgacgtcgccgttgga
gcacgttgtgcctgcaacggccatgctggggaatgtgtaaacagtaccagtgtagatgga
agaattcgcagagtatgtaggtgcgaacataataccgcgggtccagattgcaacgagtgt
ttaccattttacaacgatgctccatgggggcgtgctacaactacaaacgcgcacgaatgc
aaaccctgcaattgcaatgggtattcggagagatgctacttcgataaggagctgtataag
gccactggccacggtggtcattgcctggattgccgtgctaatcgtgacggcgcgaattgc
gaacgttgccgggagaacttttaccagcggccagaagacaactactgcgtcacctgcaac
tgcaacgaaatcggttctagaagcttacaatgtaacagcgaaggaaaatgccaatgtaaa
cctggtattacgggtgacaaatgtgaccattgcgcaacaaattattataactttggctca
tacggttgtacttcctgtgaatgtgacgtagctggctccctgtcaaatacacagaactgt
aatcctgccagtggcacttgcatctgtaaagagaacgttgaaggaaagcgttgtcgagta
tgtcgaccaggatacttcaatcttgcgctggacaatgagttcggttgtacgccatgcttc
tgctacggccactcttcagtgtgcagaccagcaaccggatattcgaaacttgtaatcgaa
agtatgttcgtgagagcagctgaacgatggacagctactgtggctggcaactcaataccg
cttcattatgatcctcttactcaaacagtatcagccacggcactggaccgagacaacgtc
tatttcgttgcacctgatagattccttggcgatcaacgagcctcgtataatcaagatttg
tcattcacgttaagaatcggagaggttgggccagcgcccactgcccgtgatctaatactc
gaaggaggaaacggtgaacaaatcacgcaaccgatcttcggacagaataatcgtttgcct
actgtaacaccgcaagaatatcattttaaactgcacgagcaccctaactatggatgggaa
ccacgtctgtcctcccgagctttcatgtccatcttatcaaatctaacagctataaaaatt
cgtgggacctatacgcatcaaggcaggggattcttggacgatgttaagctggagactgct
catcgtggagctgctggtgaatccgctgattggatagaacattgtcaatgtccccacggt
tacgtgggacaattttgtgaatcttgcgcgcccggattccaccacgacccaccaaacggt
ggtccttttgctctctgtgttccttgcaattgcaataaccatgctgatatttgtgaagcc
gaaactggtcaatgtatttgccaacataatacagctggtagcaattgtgaattgtgtaaa
cgtggatattatggtcacccattgaagggaacacctaacgattgtaacccctgtccttgt
cctgacaatggaccttgcatattgcttggcaataaaccagacccaatttgctccgaatgc
ccgtcgggtagaacaggacctagatgtgaaacatgttccgatggatattatggaaatcct
gagaaaggtgttgactgtcgatcttgcgactgtaacaataacatcgacttgaatgctgtt
cgaaactgcgatcatgaaagcggcgaatgtctaaagtgcgtgaacaacacagctggtttt
cattgcgaggaatgtcttgcagggtactatggagacgctctgtccgatcgtaaagaagat
ggatgcaagttgtgtcaatgttatccaccgggtaccatcgaacttgacgatggcagagta
gcgccttgcgagcagttgacaggtcattgcaggtgcaagcctcatgtaatcggtcgcaat
tgcgataaatgcgaagaaggatattatcatatactgagtggcgagggatgtgcaccttgt
aattgtgatcctgaaggatcttacaatcgtacttgcaaccccattaacggccaatgcgaa
tgtagacctggtgttactggtcaacattgcgatgcatgtcttccttatcaatatggattc
agcagagaaggttgtaaatcttgcgagtgtgacaatattggttctcaagatctgcagtgt
gacactagtggtcagtgcccgtgtctcacgaacgtggaaggaagacgttgcgatcgttgc
aaggaaaacaaacataacaggcaaaacggatgcgtaaattgtccggattgttacaatctt
gttcaagatgcagtcgataatcatagagaacgtttagctgaactggaaaacacactcaag
aaaattaacagcagtccaaccgtcataaaagactccgactttgaaaaggaactgaaaaac
gtacacgacagagtgaagaatcttttaaagattgcgaaacaaggatctgggaatgaaaat
aaaactttggtggaacaactcgatgaactacacgatcagttgaatgaaattggacagatc
tcgcaaacggtagatttaactatttctgatgcgaacgatactactgctgaaggtttgacg
agtatcgaggaagcagaaagagtgctcgacaaaatacacgctcagttaactgaagcagag
gattatttggccacggacggggcgtctgcattatttgaagcgaaagtgctcgcggaacaa
gttggccaacaaaacaaacagatgaccgcgactgcgcaagaagcacgtgtattggctgac
ttaaacgttaacgaagctaagaagattcatgcactggcagagcaagctcggagtacaacg
atagaagcgtacaatcttgcaaagacagctatagcgaaaagcaccaatctgaccgaagat
ataagaggtttggagaataaattggagctattagagcgtagtatgaacgaagtgcaaaat
cttaccagtatagcagctaataaatcatccgctgtttcgcaggaagcaatagactcattg
attctcaatgtagcacttccgcctgttgacattcagcaattacaaagtcaagttaaagag
gttaacaatgagggattgcggttgaaagaggaggcgcaattgttaatagatcggcatgaa
aatcttataaccgagatggtagaaaaaataaagaaaagcgaagaattgctggacggggcg
caggttcagcaagcagctactgccgatcttttggcagaattggacagagcgaatgaaaaa
gcaaacgacgctgtgaaacgaggtgaccaaactttaaaggaagctcaagaaacactgaaa
aaactaggcgagtttgatgctgaagtgaaacgtgaacgcatcaaagctcaagatgcattg
aaaggtatagacgacatcttgatgatgattgcggatgcgagacggcaagctatgcaagcg
gaggaagtgctgatcgggtcagaaaataacgccaaaaatgctcgtaaaatagcgcagaat
gctcagacgtacgcagaggaagctagcgcaaaagcaaacgttattagaaccgaagcaaat
aagaccaaggtagaagcacttcgcgtaggaaacgaggcagaaaaattacatctgagggtt
gacactacagactctatgatgacaaagtacgaaattcaaattgaccaggatacgaatatc
gcaacagaagcaaatcataaaattggccaaacgaaaatcaacgtaaccctggcaacgcaa
caagtggacaaagcattagccgaagtggccgaaataataaaagaccttgacaatctgccg
aaaataaatgagaccgacttgaacgatctggaagaacgtctagtcgcggctgaaaaggag
atcgcggttgcaaatctggatcaaaggatccgtgcattaacggatgcaaagaatttgcaa
acacagtgggtaaagaattacgaggacgagattagtagattaagaatagaagttgggaat
atcggtgacataaggaaagttttgcctgtcgagtgtcacaagcgtgtacgattggaaccg
taa
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