Colletes gigas: 122400048
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Entry
122400048 CDS
T07492
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
cgig
Colletes gigas
Pathway
cgig03013
Nucleocytoplasmic transport
cgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122400048
03015 mRNA surveillance pathway
122400048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122400048
03041 Spliceosome [BR:
cgig03041
]
122400048
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122400048
Spliceosome [BR:
cgig03041
]
Complex C
Other components
EJC/TREX
122400048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
Motif
Other DBs
NCBI-GeneID:
122400048
NCBI-ProteinID:
XP_043257188
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MRKLDPQEAWGAERLEAQLEAARDGLRGLDRSIRKILGRDLPDGENGPIQPPPRLSQKRP
LQEDRRRVVSDFVNNEVPGGKRRWQGSNGEPKTVFSRLSARVPSNADDSADEDDTIIKPA
VSSRVIATPREIPSRQEVIRRERTDERSRQRNKRMFGALLGTLQKFRQEETKLKAKEDKK
AEVEARVEEARRREKEELRRERQQLFLSRKRQLAEVRALEAKLARSRQFQDWRAAQLPLA
SFIKTRAQPPIYYAPKRKHPQTDILLAQSAKELHEEIERREKALVEELELIEVQVGLGKH
QQNFDGSASLNTSAEVQQSVEEGEENRDPNPEKTSESETNEAVDVSVKPEKDENCDKTKE
IEKSEEVQVDEVKDENNG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaattagatccacaagaggcctggggggctgagagattagaagcgcaattagaa
gctgcccgagatggtcttcgaggactcgaccggagtattcggaaaatcttgggccgggat
cttcccgacggagaaaatggtccaatacaaccgccacccagactatcgcaaaagaggcca
ttgcaggaagacagacgacgcgttgtatcagattttgtcaacaatgaagtacctggtggt
aaacgcagatggcaaggttcgaacggggaaccaaaaacagttttcagtcgtttaagtgca
cgtgttccttccaatgctgatgatagcgcggatgaagatgacaccattatcaagccagcc
gtatcttcacgagtgatagcaacaccacgagaaattccatctcgacaggaagtgatcagg
cgggaaagaacagacgaacgtagtcgacaaaggaataaacgaatgtttggcgccctttta
ggtacgctacaaaaatttcgtcaagaggaaactaaacttaaagcaaaggaagataagaag
gcggaagtagaagcaagagtagaggaggctcgaaggagggaaaaggaagaattacgaagg
gaaaggcaacaactgtttttgtcacgcaaacggcaattagcagaggtacgagcgttagag
gcaaagttggcgcgtagccgacaatttcaagattggcgtgctgcacagttgccacttgcg
tcgtttataaaaacgcgagcacaacctcctatttattacgcaccgaagcgtaaacatcca
cagaccgacatccttctggctcagtccgcgaaagaacttcacgaggaaattgaaagaagg
gaaaaagcattggtcgaagaactcgaattaatagaggtgcaagtaggccttgggaagcat
caacagaatttcgatggatccgcatcgctaaacacgtcagcggaagtccagcaatcggta
gaagaaggagaggagaatcgtgatccgaatccggaaaagacttcagaatcagaaacgaac
gaagcagttgacgtttcggtgaaacccgagaaggacgagaactgcgataagacgaaagag
attgaaaagtcggaggaagtacaagtagatgaagtgaaggatgagaataatggctag
DBGET
integrated database retrieval system