Colletes gigas: 122400119
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Entry
122400119 CDS
T07492
Name
(RefSeq) transcription factor SOX-2 isoform X1
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgig03000
]
122400119
Transcription factors [BR:
cgig03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122400119
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
CSRNP_N
PAT1
Motif
Other DBs
NCBI-GeneID:
122400119
NCBI-ProteinID:
XP_043257310
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MLTMETDMKGGSLHGQMPPHPHQGVSPMGHHTGVSPYGSLGSIVHSPALSGSPPSTGGLG
LGLQHHHQTPQHHYASMQAAQQQQQQQQQQQQSMHSLAQQAASQQQQQHHPHQQQQQQPQ
PQQHHQPPNNNNNTSKNNNIDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAE
WKLLSETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKFPLGGGVTGVGGML
GVDQRQVGATGGPQQAQLSRDVYQMPNGYMPNGYMMHDPTAAYQQHVAYGGHMGGAAAAA
AAASAAGYPRYDMGHHMGGGSPSPINSYMNGYGGYGSTTVPGGSPSPYHQAQPGSQMSSH
SPSGSSIKSEPTSPASGGIHTPTPTGASSTSGAGGQVVKREYMGQQQTQQSQGDLRQMIS
MYLPQGVEQGVVQHGAGVYSPGPSPDPLAQHHSAIPPLTHMSESDRKMLNPETGCYSESV
RAWDWNATGNVRVQESWPT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgatggagacggacatgaagggtggcagtctgcacggtcagatgccaccgcac
ccacatcagggtgtatcgccgatgggccatcatacgggggtctcgccttatggtagcctc
ggctcgatagtgcacagtccagcgctgtctggtagtccgccgagcaccggcggcctgggc
ctcggtctccagcaccatcaccagacgccccagcatcactacgcgtcgatgcaggcagcg
caacagcagcaacaacaacagcagcaacagcagcaaagcatgcattctttggcgcagcag
gcggccagccaacaacagcagcagcaccatcctcaccagcagcagcagcaacagccgcaa
ccgcagcagcaccatcaaccgcccaataacaacaacaacaccagcaagaacaacaacatc
gaccgcgtgaagaggccgatgaacgcgttcatggtgtggtcgcgcggtcaacggcgcaag
atggcgcaggagaacccgaagatgcacaactcggagatctcgaaacggttgggcgccgag
tggaagctgctcagcgagaccgagaaacgtccgttcatcgacgaggcgaaacgattgcgc
gccgtgcacatgaaggagcaccccgactacaagtacaggccgcgacgcaagaccaaaacg
ctgctcaagaaggacaagttcccgctgggcggaggtgtaacgggagtaggcgggatgctg
ggggtcgatcaacggcaagtcggcgctaccggtggcccgcaacaggcgcaattgtcgcgc
gacgtttaccagatgcccaacggttatatgcccaacggttacatgatgcacgacccgacg
gccgcgtaccagcagcacgtcgcttacggcggtcacatgggcggcgcggcggcggcggcg
gcagcagcctcggccgccggttacccaaggtacgacatgggtcaccacatgggcggtggc
agtcccagtcccatcaacagctacatgaacggttacggtggctacgggagcaccaccgtg
cccggcggttcgccgtcgccctatcaccaagcccagcccggctctcagatgtcgagtcac
agtcccagcggtagcagcataaaatcggagccaacgagtccggcgagcggcggcattcac
acgccgacgcccacaggagcgtcgtcgacgtccggggccggtggccaggtcgtgaaacgg
gaatacatgggccagcagcagacgcagcagtcccagggcgacctcagacagatgatctcg
atgtatttgccgcagggcgtcgagcagggggtcgtgcaacacggtgccggtgtctactcg
ccgggaccctcgccggatccgctcgcgcagcatcactccgccattccgcctctcactcat
atgtcggagagtgatcgcaaaatgttgaatccagaaaccggctgttactcggagtccgtt
cgggcatgggattggaacgcgacgggcaatgtacgcgtacaagaatcctggccaacgtga
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integrated database retrieval system
