Colletes gigas: 122400170
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Entry
122400170 CDS
T07492
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
cgig
Colletes gigas
Pathway
cgig03013
Nucleocytoplasmic transport
cgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122400170
03015 mRNA surveillance pathway
122400170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122400170
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122400170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
122400170
NCBI-ProteinID:
XP_043257828
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSCEELNTTKEIQSSEQTDGHQDSECDIYPSDSDVESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTADEVTDNNAEPQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGTNVAVRNKRFSRSGEDFPALGTNKNSSPQVEEPVISSAWYSSKNK
SQNKVQNFPPLQTQGDSPKTKSSSTSNVHTNENKAPNEPTNPAWKKDTKHTSHTQSSNGN
SGAGGDADKLVNAKTSPRDNNKRNVQESVSLAASRTRGRGMRINVNNNMVTNRMVESKPK
GHGAGPITTENKRNSTIQNDDEQQITNDMKRVSVSDGTQYHQSGRHNKNFYGQSSNQQRS
NAVPPRMQQQSHTQQPQQSQQQQSIQQQDGSANRPRRYSSLRQRPTVSDTPGQQTYPPQH
GQHGQHGQHGYFPPQAGNSRAVLESQGYPPGHFEQTTPVATAATPMAGQPVIPLPPNGQP
ASYAPPPFLVPPPQFISPQTAPPSIINYVSGPNGPAFQPNYQGYQGYSPPVQPQRPPPPQ
ELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAAIPILPPPDNQHQGSRGRGRSTQQQQTSQ
PGNMQQIELEVKDNLFEDEQNIVPEPFDSTPIEETVQIQEMQKNEDLSAITDTVVEDEGK
NVKDIDIDTAVDSQIITSDPINEISADDSIKVTIDDHNIIPLKSLETVVEKTENDLSVIE
NTTSESTVIEEAAA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacacgagacgtcgtcgaaaatctaatcagtcgtgcggttccgacgacctctcg
gactcttgcgaggagttgaacacaacgaaggagatccagagcagtgaacaaactgatgga
caccaagattcagaatgtgatatttacccatcagattctgatgttgaatctcaagatggt
gcactaagagaaagtggagatggccaagaagaagagaaacctcaaaaaaaattagatgat
gatgaagacagacgcaatccacaatatattcctaaaagaggaactttttatgagcatgat
gatagaacagcagatgaagtgacagataataatgcagagccacaaaatgagagagaaacc
aaagagaagaaagtatggaaagacaaagaagatagatgggatcatgatagatacaatgat
gaagaacaggcaccaaagagccatgaagaattgatagcagtttatgggtatgatataagg
aatgaagaaggtccacccagagctagaagaagaagaagatatggacgtggccctaataaa
tatacgcgtaattgggaagatgaagatgcatatgggaaaccaggaactaatgttgccgtt
agaaataaacggtttagtagaagtggtgaagatttccctgctttaggaactaataaaaat
tcttccccacaagtagaagaaccggtaatctcatctgcttggtacagtagtaaaaataaa
tcacagaataaagtacagaactttccacctctacaaactcagggtgatagcccaaaaacg
aaatctagcagcacgtctaatgttcacacaaacgaaaataaggctcccaatgaacccaca
aacccagcctggaaaaaggacacgaagcatacatcccatactcaaagtagcaacggaaat
agcggcgctggtggtgatgcagataagttggtcaatgcaaaaacatctccaagagataat
aacaagaggaacgtccaagagtctgtaagcttggcagcaagtagaactcgcgggcgagga
atgaggataaacgttaataacaatatggtcactaatagaatggttgagagtaaaccaaag
ggacacggagcgggtccgatcaccaccgagaataagagaaatagtactatacagaacgac
gatgaacaacaaattacaaatgacatgaaacgcgttagtgttagcgatggtacacagtat
catcaaagtggaagacacaataagaacttctatggacagtcgtccaatcaacagagatct
aacgcagtacctccgagaatgcaacagcagtctcatacgcaacaaccacaacaatcgcaa
cagcaacaatcgattcagcagcaagatggttcagctaatagaccgagacgatattccagt
ttgcggcaacgtcctactgtgtccgatactccgggacaacagacttatccaccgcaacat
ggacaacacggacaacatggtcaacatggatattttcctcctcaagctggaaattcaaga
gctgttttagagtcacaaggatatccaccaggtcattttgagcagactacccctgttgct
accgcagcaacacctatggctggacaacctgttattcctttgccacccaatggccaacct
gctagttatgctccaccgccatttttggtaccgccgccgcagtttatttccccgcaaact
gctccgcctagtataattaattatgtttccggcccgaatggaccagcatttcaaccaaat
tatcaaggttatcaaggatatagcccgccggtgcagcctcagcgtcccccaccgccgcaa
gaattattccaaccgcaaggttgtacttactatagtccagcgcagcagcaacaacagcaa
caacaatcggcgccaatgagacggccgaaagcagctattccaattctcccaccaccggac
aatcaacatcagggcagtagagggagaggaagaagtacacagcaacaacaaacgagtcaa
cccggtaatatgcaacagattgaactagaggtcaaggacaatttgtttgaagatgaacag
aatattgtaccagagccgtttgatagtacgccaatcgaggagactgtgcagattcaggaa
atgcagaaaaatgaagatttaagtgcaataacggatactgtggttgaggatgaaggaaag
aatgttaaagacattgatattgatacagcggtggactcgcaaattattacgtcggacccc
ataaatgaaataagtgctgacgattcgataaaggtcactatagatgatcataatatcatt
cctctgaaatctctggagacagtcgtggaaaagactgagaatgatttgagcgtaattgaa
aacactacatccgaaagcacagtaatcgaagaagcagcagcttaa
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integrated database retrieval system