KEGG   Colletes gigas: 122400170
Entry
122400170         CDS       T07492                                 
Name
(RefSeq) protein CASC3-like isoform X1
  KO
K14323  protein CASC3
Organism
cgig  Colletes gigas
Pathway
cgig03013  Nucleocytoplasmic transport
cgig03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122400170
   03015 mRNA surveillance pathway
    122400170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgig03019]
    122400170
Messenger RNA biogenesis [BR:cgig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     122400170
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 122400170
NCBI-ProteinID: XP_043257828
LinkDB
Position
Unknown
AA seq 794 aa
MSDTRRRRKSNQSCGSDDLSDSCEELNTTKEIQSSEQTDGHQDSECDIYPSDSDVESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTADEVTDNNAEPQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGTNVAVRNKRFSRSGEDFPALGTNKNSSPQVEEPVISSAWYSSKNK
SQNKVQNFPPLQTQGDSPKTKSSSTSNVHTNENKAPNEPTNPAWKKDTKHTSHTQSSNGN
SGAGGDADKLVNAKTSPRDNNKRNVQESVSLAASRTRGRGMRINVNNNMVTNRMVESKPK
GHGAGPITTENKRNSTIQNDDEQQITNDMKRVSVSDGTQYHQSGRHNKNFYGQSSNQQRS
NAVPPRMQQQSHTQQPQQSQQQQSIQQQDGSANRPRRYSSLRQRPTVSDTPGQQTYPPQH
GQHGQHGQHGYFPPQAGNSRAVLESQGYPPGHFEQTTPVATAATPMAGQPVIPLPPNGQP
ASYAPPPFLVPPPQFISPQTAPPSIINYVSGPNGPAFQPNYQGYQGYSPPVQPQRPPPPQ
ELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAAIPILPPPDNQHQGSRGRGRSTQQQQTSQ
PGNMQQIELEVKDNLFEDEQNIVPEPFDSTPIEETVQIQEMQKNEDLSAITDTVVEDEGK
NVKDIDIDTAVDSQIITSDPINEISADDSIKVTIDDHNIIPLKSLETVVEKTENDLSVIE
NTTSESTVIEEAAA
NT seq 2385 nt   +upstreamnt  +downstreamnt
atgtcggacacgagacgtcgtcgaaaatctaatcagtcgtgcggttccgacgacctctcg
gactcttgcgaggagttgaacacaacgaaggagatccagagcagtgaacaaactgatgga
caccaagattcagaatgtgatatttacccatcagattctgatgttgaatctcaagatggt
gcactaagagaaagtggagatggccaagaagaagagaaacctcaaaaaaaattagatgat
gatgaagacagacgcaatccacaatatattcctaaaagaggaactttttatgagcatgat
gatagaacagcagatgaagtgacagataataatgcagagccacaaaatgagagagaaacc
aaagagaagaaagtatggaaagacaaagaagatagatgggatcatgatagatacaatgat
gaagaacaggcaccaaagagccatgaagaattgatagcagtttatgggtatgatataagg
aatgaagaaggtccacccagagctagaagaagaagaagatatggacgtggccctaataaa
tatacgcgtaattgggaagatgaagatgcatatgggaaaccaggaactaatgttgccgtt
agaaataaacggtttagtagaagtggtgaagatttccctgctttaggaactaataaaaat
tcttccccacaagtagaagaaccggtaatctcatctgcttggtacagtagtaaaaataaa
tcacagaataaagtacagaactttccacctctacaaactcagggtgatagcccaaaaacg
aaatctagcagcacgtctaatgttcacacaaacgaaaataaggctcccaatgaacccaca
aacccagcctggaaaaaggacacgaagcatacatcccatactcaaagtagcaacggaaat
agcggcgctggtggtgatgcagataagttggtcaatgcaaaaacatctccaagagataat
aacaagaggaacgtccaagagtctgtaagcttggcagcaagtagaactcgcgggcgagga
atgaggataaacgttaataacaatatggtcactaatagaatggttgagagtaaaccaaag
ggacacggagcgggtccgatcaccaccgagaataagagaaatagtactatacagaacgac
gatgaacaacaaattacaaatgacatgaaacgcgttagtgttagcgatggtacacagtat
catcaaagtggaagacacaataagaacttctatggacagtcgtccaatcaacagagatct
aacgcagtacctccgagaatgcaacagcagtctcatacgcaacaaccacaacaatcgcaa
cagcaacaatcgattcagcagcaagatggttcagctaatagaccgagacgatattccagt
ttgcggcaacgtcctactgtgtccgatactccgggacaacagacttatccaccgcaacat
ggacaacacggacaacatggtcaacatggatattttcctcctcaagctggaaattcaaga
gctgttttagagtcacaaggatatccaccaggtcattttgagcagactacccctgttgct
accgcagcaacacctatggctggacaacctgttattcctttgccacccaatggccaacct
gctagttatgctccaccgccatttttggtaccgccgccgcagtttatttccccgcaaact
gctccgcctagtataattaattatgtttccggcccgaatggaccagcatttcaaccaaat
tatcaaggttatcaaggatatagcccgccggtgcagcctcagcgtcccccaccgccgcaa
gaattattccaaccgcaaggttgtacttactatagtccagcgcagcagcaacaacagcaa
caacaatcggcgccaatgagacggccgaaagcagctattccaattctcccaccaccggac
aatcaacatcagggcagtagagggagaggaagaagtacacagcaacaacaaacgagtcaa
cccggtaatatgcaacagattgaactagaggtcaaggacaatttgtttgaagatgaacag
aatattgtaccagagccgtttgatagtacgccaatcgaggagactgtgcagattcaggaa
atgcagaaaaatgaagatttaagtgcaataacggatactgtggttgaggatgaaggaaag
aatgttaaagacattgatattgatacagcggtggactcgcaaattattacgtcggacccc
ataaatgaaataagtgctgacgattcgataaaggtcactatagatgatcataatatcatt
cctctgaaatctctggagacagtcgtggaaaagactgagaatgatttgagcgtaattgaa
aacactacatccgaaagcacagtaatcgaagaagcagcagcttaa

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