Colletes gigas: 122400324
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Entry
122400324 CDS
T07492
Name
(RefSeq) probable nuclear hormone receptor HR3
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgig03000
]
122400324
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgig03310
]
122400324
Transcription factors [BR:
cgig03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122400324
Nuclear receptors [BR:
cgig03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
122400324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122400324
NCBI-ProteinID:
XP_043257653
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MRACVRTRQWSRLAEEYVRLLRFSDAPCTKHFPRLALFVSFSGAVHSPFSPFSVARCRCS
STRLVTSPRAHSGRFVTRGSRVGIRRAHETRCFRLEVRSRRSSSSVVDAAPIKRTRSDVV
RRIPRVCVLSAANKVIIAAGKTPAQIEIIPCKVCGDKSSGVHYGVITCEGCKGFFRRSQS
SVVNYQCPRSKNCVVDRVNRNRCQYCRLQKCLRLGMSRDAVKFGRMSKKQREKVEDEVRF
HRAQMRAASETAPDSSVFEHQTPSSSDQHHPYNGGYTYGGSEYASPGPGTGGSGYYNHQA
MTNYELSADYVDSTTTYDPRPTQTQVADTVAPDTPSAVTATGVLPSVVTTGKSLSASTTG
SSTGGSGGGSSGGGGGGGNGGGSGGGGSGGGGSGSGTAGGAATTGGGGGGAGSLSGGGIV
AVKQETTVELASLGHGSYTMVDSTTFLSSQQQRVSNPSEDDEVPSLPSMSHARYPAQISE
LLSKTIADAYARTYLLSTEEIQESFRKPHDLSRLIYYKNMAHEQLWLECAQKLTAVIQQI
IEFAKMVPGFMKLSQDDQIVLLKAGSFELAVLRMSRYLDLQQNCVLYGDTMLPQDAFYTT
DTAEMKLVSCVFELARSIAELKLTETELALYSAAVLFSPDRPGLKGLAEITRLSQAVIRA
LRSELDRNHVSPIKGDVTVCDAILAKIPQLREISLLHMDALAKLKRSQPHLDFPALHKEL
FSVDS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgtgcgtgcgtacgcgccagtggtcccgcttggccgaggagtacgttcgcctc
cttcgtttctccgacgccccgtgcaccaagcattttcctcggttggccctcttcgtttct
ttctccggagctgtccattctcctttctcccctttctccgtcgctcgttgccgttgttcc
agcactcgactcgtcacctctccgcgagcgcacagtggccggtttgtgactcgcggctcg
cgcgttggaattcgtcgagctcacgaaactcggtgttttcgtctcgaggttcgatcgcga
aggagtagcagtagtgtcgtcgacgcggcaccgataaaacgaactcgctccgacgtcgtg
cgtcgcattccacgtgtgtgcgtgttaagtgcagccaacaaagtgatcatcgcggctgga
aagactccagcccagatcgaaataatcccgtgcaaggtgtgcggcgacaagagcagcggc
gtccattatggcgtgatcacctgcgagggctgcaaaggcttcttcaggcggtcccagtcg
tcggtcgtcaactatcaatgtccgcggagcaagaattgtgtggtcgaccgtgtaaacaga
aaccggtgccagtattgtcggttgcaaaagtgcctacgcctcggcatgtccagagatgcc
gttaaattcggacgcatgtcgaagaagcagagggagaaggtcgaggacgaagttaggttc
cacagggcacaaatgagagcggcctctgagacggcgcccgatagcagtgtatttgaacat
cagaccccgagcagttcggatcaacaccacccctacaacggcgggtacacatatggcggt
agtgaatacgcttctcccggtcccggaactggcggatcgggttattacaatcatcaggcg
atgacgaactacgagcttagcgccgattacgtcgacagcacgacgacctatgacccgcga
ccgacgcagacgcaggttgcggacactgtcgcccctgatacgccctccgctgtcaccgcg
actggggtacttcccagcgtggtcaccaccggaaagtcgctgtctgcatcgacgaccgga
agcagtacggggggtagtggtggaggtagtagcggaggcggtggtggcggtggtaacggt
ggtggatccggtggtggtggctcgggtggtggagggagcggttctggcaccgccggtggt
gcggccaccaccggcggcgggggcggcggtgccggttctctgagcgggggtggaatcgtt
gctgtgaagcaagagaccaccgtcgaacttgccagcctgggccacggctcgtacacgatg
gtcgactcaacgacctttctgagcagtcagcaacagagggtcagcaatccatccgaggac
gacgaagtgccgagtctgcccagtatgtcccatgcgagatatcctgcacagatcagcgag
ctgctctcaaaaacgatagcggatgcatacgcaagaacgtatctgctgtcgacggaagag
atccaggagtctttccggaagccgcacgatctctccagattgatctactacaagaacatg
gcgcacgagcagctgtggctcgagtgcgcccaaaaactaaccgccgttatccagcagatc
atcgagttcgccaagatggttcctggattcatgaagctctcccaggacgatcagattgtt
ctattaaaggctggttccttcgagttggctgtgctacgtatgagcaggtaccttgatctt
cagcagaattgtgtcctgtacggcgacactatgttgccacaggacgcgttttatacaacg
gacacggcggaaatgaagctcgtttcttgcgtgttcgaattggccaggagtattgccgaa
ttgaagctcacggaaacggagctggcgctttacagcgcggcggttctgtttagtcccgat
cggccgggactgaaagggctcgcggaaatcacgagactgtcacaggcggtaatcagggcg
ctcaggtcggagctcgaccgtaatcacgtgtcgcccataaagggcgacgtgacggtgtgc
gacgcgatcctggcgaagatcccccagctacgggagatctctctgctgcacatggacgcc
ctcgccaagctaaaacggtcgcagccgcacctcgactttccggccctccacaaagagctt
ttcagcgtcgacagctga
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