Colletes gigas: 122400325
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Entry
122400325 CDS
T07492
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
cgig
Colletes gigas
Pathway
cgig03013
Nucleocytoplasmic transport
cgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122400325
03015 mRNA surveillance pathway
122400325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122400325
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122400325
mRNA cycle factors
P-body specific factors
122400325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
122400325
NCBI-ProteinID:
XP_043257654
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MSEIEEAAPEAAEAAIEQDVVSEEDKQYLMEYVKETEQRLATKEEIRASNLNPNRPPDTY
FSKLDSTLKRNTTFVKKLKNFSSIQLDTVLKDMMHLNLTKYVSEVATALVDAKLKMTDVA
PAIKVCSFLHQTYAEFSTHFFENWQRILSLKVVDKIANPSKLRVDLRFYAELVNAGIFTH
KQGLSLLGSALTVLINMDKEEHNNASIILSFCKHCGEDYAGLVPKRVREISEKLNVPIPK
SKLLSPDKQQNVRLLLRDYYNSLCKHLLKEHKDLQAFEKQNRKILQTRGELSSERKEKLE
SLQVSYERLLNNVQSFSDTLDEPMPELPVDSEMKAEAEETLKMISEGEENSILEDMWGDD
ETRRFYEVLPDLTVFLPGSYLKEVPKQDAPISEEALDEEVTFDELEETEKVDEPEAEVDE
PQVSNISNKILLDAFLTHLPNCVNREMIDNAAVHFLMNLSTKHNKKKLVKALFGVSRIRL
DLLPFYSRLAAILYPVMPDVGNDLCLMLKHDFKYHVRKKDQINIESKVKVVRYIGELVKF
KLYSKIEALYCLKVLLYDFTHHHIEMACNLLETCGRYLFCSPDSHQRTKVYLEQMMRKKA
VTALDSRYVTIIENAYYFVNPPESTGGVSRKDRPPIHEFIRKLLYQDLSKTNTDKVLKWM
RKLDWEDESVSSYAIKCLTAAYNVKYLNIRCVGSLLAGLVAHYETIGPHVVDGVLEDIRL
CMEINLPKFKQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSMDHSAPSILDPPD
HLFRIRLVCTLLETCGQYFNGGSSKKKLDYFLIFFQNYYWFKYTDPIWTSENPFPVGIDY
MYRDTLTMLRPKMQLFQSYKEAQCAVEELRNTLYPTLGNPIAEDGADRTDGDSDMGVIAE
GDEELTVTTGNGSGDAKGVADLHFEESEDCSEAQSEEEWTADAERDDTMGTQENTQGDQS
LSEGGTDGVLMDVTELNAALPAGPRRVSCPEDDDFLSALDKMVSDNIQDRMRDSVKPQQV
DISVPLHVKSTKKTYEQLQERPTDNSTVDFVLMLRKGNKQQYKNLAVPVSSELAMNLRNR
EQEQKEEKERVKRLTLNITERQEEEDYQETINQSTRPVTVNLNRERRQKYNHPKGAPDAD
LIFGPKKIR
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaattgaggaagcagcaccagaagctgcagaagcagctattgaacaggatgtt
gtgtctgaagaagataaacaatacttaatggaatatgtaaaagaaacagaacaacggctt
gctacaaaagaagaaattcgagcatctaatttaaaccctaatagaccaccagacacatat
tttagcaaattagattcaaccctgaaaagaaacacaacatttgtgaaaaaactaaaaaac
tttagtagtatacagttagatacagttttaaaagacatgatgcatttaaatttaacaaaa
tatgtaagcgaagttgctactgctttagtggatgccaagttaaaaatgacagatgttgcg
cctgctattaaagtatgtagctttttacatcaaacatatgcagaattctctacgcatttt
tttgaaaattggcaaagaattttatctctgaaagttgtagataaaattgcaaatccgagc
aaacttagagtagatctccgattttatgcagagctggttaatgcaggaattttcacgcat
aaacaaggattatctctacttggttcagcattaacagttttgattaatatggataaagaa
gaacacaacaatgcaagcattatattaagtttttgcaaacactgtggtgaagattatgca
ggtcttgtacctaaacgagtaagggaaatatcagaaaaattaaatgtaccaattcctaaa
agcaaattactttcacctgataaacaacaaaatgttagattactactacgagattattat
aactcgttatgcaagcacttattaaaggaacacaaagatcttcaagcatttgaaaaacaa
aaccgaaaaatattacaaaccagaggtgaactaagttctgaaagaaaagaaaaacttgaa
agtcttcaagtatcttatgaacgtttgcttaataatgtacaaagtttttctgatactttg
gatgaacctatgccagaacttcctgttgatagcgaaatgaaagcagaagcagaggaaacc
ttgaaaatgattagcgaaggggaggaaaatagtatcttagaagacatgtggggagatgac
gaaactaggcgattctatgaagttttaccagacttgacggtatttcttccaggatcatat
ttaaaagaagtacctaaacaagatgccccaataagcgaagaagctttagatgaagaagta
acatttgatgaattagaagagactgaaaaagtggatgaacctgaagcagaagtggatgag
cctcaagtttcaaacataagtaataaaatacttttggatgcattcctaactcatttacca
aattgtgtaaatcgtgaaatgattgacaatgctgcagtacactttttaatgaatctcagc
acaaaacataataagaaaaaattagtaaaagcgttatttggtgtgtccagaattcgttta
gatctactaccattttattcacggttggctgctattctttatcctgttatgcctgatgtt
ggaaatgatttatgtttaatgttaaagcatgactttaaataccacgtacgcaaaaaggat
caaatcaacatagaatcaaaagtaaaagttgtcagatacattggtgaacttgtaaaattt
aaactttactcgaagatagaagcattatattgcttaaaagttttgttatatgatttcact
catcatcatatcgaaatggcttgcaatttattagaaacatgtggaagatatttattttgt
tcaccagattcgcatcaaagaacaaaagtatatttagaacaaatgatgcgtaaaaaggcg
gtcactgcattggattcgcgttatgtaacaataattgagaatgcatattattttgtaaat
ccaccagaatctacgggtggtgtctctcgaaaggatagaccgccgattcacgaatttata
agaaaattactatatcaggatctttccaagacaaataccgataaagttcttaaatggatg
cgtaaattagactgggaagacgaaagcgtatcatcttacgccattaaatgtcttactgcc
gcttataacgttaaatatttaaatattcgatgcgtcggaagtttattagcaggacttgtt
gcgcattatgaaactataggtcctcatgtagtcgatggtgtattggaagatataaggcta
tgcatggaaattaatttaccaaaatttaaacaacgtcgtattgctatggttaaatatctt
ggagaattgtataattatcgtatggtagaaagcggagatatatttcgaacattgtatctt
ctgattacttttggagtcagtatggatcattccgcgccaagtatcctcgatccacccgat
catttgtttagaattcgattagtctgtacattattagaaacctgtggacaatattttaat
ggtggttctagcaagaaaaaacttgattattttttgatattttttcaaaattattattgg
tttaaatatacagatcctatttggacttccgaaaatccttttccagtaggtatagattat
atgtatcgcgacacgctaacaatgctaagacctaaaatgcaattgttccaaagttacaaa
gaagcccaatgtgctgtggaggaattacgaaatacattataccccacacttggaaatcct
attgcagaagatggtgctgatcgtaccgatggagactctgatatgggtgtaattgcagaa
ggagatgaagaattaactgtcaccactggaaatggcagtggagatgcaaagggtgtggcc
gatttacattttgaagagtctgaagattgttctgaggcacaatcggaagaagaatggacc
gctgacgcggaaagagacgatactatgggtactcaagaaaatacacaaggagatcaaagt
ctttcagaaggtggtacggatggtgttcttatggatgttacagaattaaatgcagcatta
ccagctggtcctagaagagtaagttgcccagaagacgacgactttttgtctgctctcgat
aaaatggtctcggataatatacaagatagaatgcgagattcggtaaaacctcaacaagta
gatatttcagttcctttacatgtaaaaagtactaagaaaacatatgaacaattgcaagaa
agacctactgataatagtacagtcgactttgtgcttatgctaagaaaaggtaataaacaa
cagtataaaaacttagcagttcctgtgtcgtcagaattggcgatgaatctcagaaatcgg
gaacaagaacaaaaagaagaaaaagaacgagttaaaagattgacattaaatattacagaa
agacaagaggaagaagattatcaagaaacaattaatcaaagtactagaccagtgacagta
aatttaaatagagaacggcgtcaaaagtataatcaccctaaaggtgcaccggatgcagat
cttattttcggcccaaaaaagattcgatag
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