Colletes gigas: 122400421
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Entry
122400421 CDS
T07492
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cgig
Colletes gigas
Pathway
cgig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122400421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122400421
04121 Ubiquitin system [BR:
cgig04121
]
122400421
03036 Chromosome and associated proteins [BR:
cgig03036
]
122400421
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122400421
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
122400421
Ubiquitin system [BR:
cgig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122400421
Chromosome and associated proteins [BR:
cgig03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122400421
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
122400421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_4
Ank_3
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-RING_UBOX
Phage_tail_fib
zf-C3HC4
zf-C3HC4_4
ZZ
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
122400421
NCBI-ProteinID:
XP_043257814
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MNTSWKNTRKSLKNFANVLVCNKCGNEPINPMRYTNCGHFFCMQCVRNDSTCMTCDTPVQ
PIEIHNDHMIKSLASYCNIIAEIVEEKDLWNKTTNFQSTTQIPLITLNSESNINKRQRSV
PKKNINKCNTKGETQLHIACLKNNEDRVRVLLASGANPNTKDNAGWTPLQEVVNYGFTKI
CQLLLECGGSPNIPGAENKTPLHDAAINNRLAEARLLLQYSAKKDVFDKHGKKPIDYCEP
STKMWNLLSEKRQFNDKTDPILNCTLNSTLDQSFFNTQSSTKFVVYAPNLREENNKCLHQ
VSLKHKIKVTSVFRSSITHVIVEASNKNIVKLSYEVMIALVRGNWLLNSEWIQLVMDVDD
ILAVDLEPFEINGSPIIGIPRKARENAQSQNPGLFDQCYFYFALQQKKPYSVSGMLLKKD
DLIRLVCEGNGSVLSREPRPDDTKNKEKITPFHTANNPSHSLYKCTHYIIYVPGRDEPRL
KYNMPHIKSLPLIWLIECIETFTLIDPSHLGL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttcatggaaaaatactcgtaaatcccttaaaaacttcgcgaatgtgctcgta
tgcaacaaatgtggaaacgaaccaataaatccaatgagatatactaattgtggtcatttc
ttttgcatgcaatgcgttagaaatgattcaacatgtatgacatgtgatacaccagttcaa
ccgattgaaatacataatgatcacatgattaaaagtcttgcatcttactgcaatattatt
gcagaaatagtagaagaaaaagatttatggaataaaactacaaattttcaaagtaccaca
caaatacctttgataacattgaattcagaatctaatattaataaaagacaacgatccgta
ccaaagaaaaatataaataaatgtaatacaaaaggagaaactcagttacatattgcgtgt
ttaaagaacaatgaagatcgtgtaagagtcttattagctagtggtgcaaatccaaataca
aaagacaatgctggttggactcctttacaagaagttgtaaactatggttttacaaaaata
tgtcagttgcttttagagtgtggtggatctcctaatattccaggtgcagaaaataaaaca
ccattgcacgatgctgccataaataatagattagcagaagcaaggttgcttttacagtat
tctgctaagaaggatgtgtttgataaacatgggaaaaaacctatagattattgcgagcca
tctacaaaaatgtggaatcttttgtcggaaaaacgccaatttaatgacaaaacagatcca
attttgaattgtactttaaatagtactttagatcaatcattttttaatacgcaatcatca
actaaatttgttgtatatgcgccaaatttgcgggaagaaaataataaatgtctacatcag
gtgtcattaaaacataaaattaaagttacatctgtatttcgatcatccataactcatgtc
atagtggaagcaagtaacaaaaatattgtaaaattatcatacgaagtaatgatagcactt
gtccgtggaaattggttacttaatagtgaatggattcaattagttatggatgtagatgac
atactagcagtggatttagaaccgtttgaaattaatggttcaccgattataggtattcca
aggaaagccagagaaaatgcacagagtcagaacccaggtcttttcgaccaatgttatttt
tattttgctttgcaacaaaagaagccttatagtgtaagtggaatgttattaaaaaaagat
gatttaataaggcttgtttgtgaaggtaatgggtcggttttgtcaagagaaccacgtcca
gacgatacaaaaaacaaagaaaaaattactccttttcatactgccaataatccctctcat
tctttatataagtgtactcattatattatatatgtaccaggaagagacgaaccacgttta
aaatataatatgcctcatataaaatcattaccacttatatggttaattgaatgtatagaa
acatttacattgattgatccatcacatctaggtttatag
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