Colletes gigas: 122400457
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Entry
122400457 CDS
T07492
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgig03016
]
122400457
Enzymes [BR:
cgig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
122400457
Transfer RNA biogenesis [BR:
cgig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122400457
Prokaryotic type
122400457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Imm3
R3H
Motif
Other DBs
NCBI-GeneID:
122400457
NCBI-ProteinID:
XP_043257876
LinkDB
All DBs
Position
Unknown
AA seq
806 aa
AA seq
DB search
MSELESKNIDSKDSSMLNSKNSGSEQKSANSYGRHRDKRVFRKDSSFNNKFRRNQGPYHS
GYRNDNFGRQSYKRNWSNFQKDDERKKMKVGNRLKECNVGITEFIGDKGFFGIIKERYTD
FHVNEISFDEQIAKLTNQHIPTNVEENESLEDLKKIVSDTIWNQLQTLKDSGSPSIEIDA
TNLDKDQRRAIHTIAKKITNVISQTINKENKKIMMILPNNKDNITHNLREDNRIDWKKRG
GEYCYFVLHKVNMDTMDALNQLAMNLRMKPNNFGYAGTKDRRAWTTQWISLRKVEPSDIL
RAAKNVRGAYVGNFKFVKNSLKLGMLSGNRFRIALRNVNGTDDEIEETMVSLRDNGFINY
YGLQRFGTVAAIPTYEIGKALLQGKWNEAIELILKPREGEHDRDLAKAREIYETTKDACA
AYEKIKRYDKIEATLLKGISKSGSKNPQGALDSLPRNVRLLYIHSYQSFVWNHMVSKRIK
EFGRKPIVGDLVYEDNTKQNDNDNDDQDLAYDNECKVITEASTEANEKVSKFESEIRTDM
IKTEEISAITTESTFSSINEVTDVTECCLKIDENVEPSNNTNKNGENEDLPSLPAVKILK
EEDLPNYTLADVLMPQVGWKVTYPPYAKPWFDEFLAKDELTTDLRHKNKKYSLGGSYRKV
LQIPSNISWKIMHYKEKHSDLIMCDIDEMRKSTAPKDEPEGQYKALIVEMSLKASTYATM
ALREILKFDTSPQTQAAQSFACNLETDDLNISKDVKESENMRSLKTDNKDINGEKSPEIE
KIKSNVSTIIEVDEQVDDKMEIPDAI
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactggaaagtaaaaatattgattctaaggactcgtcaatgttgaattctaaa
aatagtgggtctgagcaaaaatctgcaaattcatatggacgtcatagagataaaagagtt
ttcagaaaagatagttcatttaacaataaattcaggagaaatcaaggtccataccatagt
ggatatcgaaatgataattttggcagacagtcctacaaacgtaattggtcgaactttcaa
aaagatgacgagagaaagaaaatgaaagttggaaatcgattaaaggaatgtaatgttggt
attacagaatttataggagataaaggattttttggtataattaaggaaagatacacagac
ttccatgtcaatgaaatttcttttgacgagcaaatagcaaaattgacaaaccaacatatt
ccaactaatgtggaagaaaatgagagtctggaagacttaaaaaaaatagtatcagataca
atatggaatcagctacaaacattgaaagattcaggatcaccttctatagaaatagatgca
acaaatttagataaggatcagcgtagagcaattcatacaatcgctaaaaagataacaaat
gtcattagtcaaactataaataaagaaaacaagaagattatgatgattctaccaaataat
aaagacaatattactcataatttgcgagaggataaccggatagattggaaaaaacgcggt
ggtgaatattgttactttgtgttgcataaagtaaatatggatacaatggatgcattaaat
caattggctatgaatttacgtatgaagccaaataattttggttatgcaggaacaaaagat
cgtagagcatggactactcagtggatcagtttgagaaaagtggaaccatcagacatactg
agagcagcaaaaaatgtacgcggagcttatgtgggaaactttaaatttgttaaaaattct
ttgaaattaggcatgcttagtggtaatcgctttaggatcgctttgagaaatgttaatgga
acagatgatgagatcgaagaaacaatggtttctttgagggacaatggttttataaactat
tatggtctacagaggtttgggactgtagctgccattccaacttacgaaatagggaaagct
ttgctacagggtaaatggaatgaagcaattgaattgattttgaaacctcgtgaaggggaa
catgacagagatttagcaaaagctagagaaatatacgaaacaaccaaagatgcatgtgct
gcatacgagaagattaagagatatgacaaaatagaggctacacttttgaaaggtatttct
aaatctggtagtaagaatcctcaaggagccttagattcgttaccaaggaatgttcgctta
ctgtacattcactcatatcaaagttttgtgtggaatcacatggtatcaaaaagaataaag
gaatttggaaggaagcctattgtaggagatttagtctacgaagataatacaaaacaaaat
gataatgataatgatgatcaggatcttgcttatgataacgaatgcaaagtcataacagaa
gcaagtacagaagctaatgagaaagtaagtaaatttgagagtgaaataaggacagatatg
ataaaaacagaagaaatatctgcaataaccacagaatcaacatttagttcgattaatgaa
gtaacagatgttacagaatgttgcctaaaaatagacgagaatgttgaaccaagtaataat
accaataagaatggtgaaaatgaagatttaccaagtcttccggcagtaaagattcttaag
gaagaagatttgccaaattatactttggctgatgtattaatgcctcaggttggctggaaa
gtcacatatccaccttatgctaaaccctggtttgatgagttcttagcaaaggatgagttg
actacagacctcagacacaaaaataaaaaatatagtttaggtggcagttataggaaagta
ttgcaaatcccttcaaatatatcatggaaaatcatgcattataaagaaaaacacagtgat
cttattatgtgcgatattgacgaaatgagaaagtcgacagcccctaaagacgaaccagag
ggacaatataaagctttaattgttgaaatgtccttaaaagcttcgacatacgcgacaatg
gcgttacgtgaaatattgaaattcgatacttctccgcaaacacaggctgctcagtctttt
gcgtgtaatttagaaacagacgatttaaacatctcgaaagatgttaaagaaagtgaaaat
atgcgttctctaaaaaccgataataaggacattaacggagaaaagagtccggaaattgaa
aaaattaaatcgaatgtttcgactataatcgaagtcgatgaacaggttgatgataaaatg
gaaatacccgacgcaatataa
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