Colletes gigas: 122400466
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Entry
122400466 CDS
T07492
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cgig
Colletes gigas
Pathway
cgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122400466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122400466
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122400466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
122400466
NCBI-ProteinID:
XP_043257891
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MADENEDQWLYGDSTDGKEYTPTSVEPESQENDSAPATVQEKSQISDDQKAESIPDTTAE
ATEETEPPEEESSSINNTQNESNTEINKNGVRESSSQEDGEAPSDTDSDDDVHVVIGDIK
STPAYGSLNIKRGGLLTNASGVPDKLNKQPGKFSIDEFETIGVINGMPAHEFNLDQLEDK
PWRQPGADITDYFNYGFNEETWRAYCERQKRMRSESGVGLILNAGGGGGNAGSMRVPQVA
ITNDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADR
REYSRKPGFPDMSVPPPGAGMPPAFDMPPPGYPGEPAPFYMPETDPYYQSYEPTQDNQWG
NDPTWQPTNLAIPMTEGEDDKDTGPKTIPTMVPPTNIPPLLPPRDSRDRERDRDRERDRD
RELDSMGRDRERDKDRERDREREKDSMVRERDRERDSMSREEERDRDRSRSQYRHKERHR
HRSRSRSRRHKSRSRSPSRRKKKSRRSERERSKEESE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaaacgaagatcagtggttgtacggggattcgaccgacgggaaagaatat
acgccgacatccgtcgagccggaaagtcaggagaatgattcagcccccgctacggttcaa
gagaaatcacaaatttcggatgatcaaaaagcggaaagcatccccgatacaacagcggag
gcaacggaagagaccgaaccgccggaagaggagtcctcgtcgatcaacaatactcaaaac
gaaagtaatacagagataaacaaaaacggagtgagggaatcttcgagtcaggaagatggt
gaagcacccagtgacacggactccgatgacgacgtccatgtcgtcatcggtgacattaaa
tcgacccccgcgtacggcagcctcaacattaaaagggggggattgcttacaaacgcgtcc
ggggtgccggacaaattgaacaaacagccaggaaaatttagtatagacgaatttgaaact
ataggggttatcaatggtatgcctgctcatgaattcaatttagatcaattggaagataaa
ccatggaggcaacccggtgcagacatcaccgattactttaattatggttttaacgaggaa
acatggagagcgtattgcgaaaggcagaagagaatgagaagcgagtccggcgttggtctg
atattgaatgctggaggtggcggtggtaatgcaggcagtatgcgcgtacctcaagtggcg
attacgaacgataacagtaaatattctggtataatgggacctaaaagagctggaccgcct
ccgggaagaaaaatggcgggaacgatagatgtaattggtagttctggtttagcttctaga
aggaatcttgataaatccccgccgaaaggaaacgtgatacaagtgatgaccgcggacaga
agggagtattctagaaaaccaggtttccctgacatgagcgtgccgccaccaggcgcgggg
atgccccccgcgttcgacatgcccccgcccgggtaccctggcgaaccagctccgttttac
atgccagaaacagacccgtactatcagagctacgagcccacgcaggacaatcagtggggc
aatgatccgacgtggcaaccgacgaatttagctattccaatgacagagggagaggacgac
aaggacactggccccaaaacgataccgaccatggtaccgcctacgaatatacccccgcta
ctaccgcccagagactctagagaccgcgagagagaccgggacagggaaagagatcgcgac
agagaattagactcgatgggaagagacagagaacgagacaaagacagagaacgcgatcgc
gaaagagaaaaggattccatggtcagggaacgggacagagaaagggactcgatgtcgagg
gaggaggagagggaccgcgacaggtcccgttcccaatatcgacacaaagagcggcacaga
catcgatcgagatcgcgatcacgcagacacaaatctagatccagaagtccgagtcgacgc
aagaagaaatccagacgctccgagagggaacgttctaaagaagagagcgaataa
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