Colletes gigas: 122400848
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Entry
122400848 CDS
T07492
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cgig
Colletes gigas
Pathway
cgig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122400848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgig03032
]
122400848
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122400848
DNA replication proteins [BR:
cgig03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122400848
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
122400848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
122400848
NCBI-ProteinID:
XP_043258481
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MVNEESQIDTGVNLYFVVPNKYKSEDDCTEEMWHTYNKCCENELQPMWITESKCDKMKPA
KNDVFIMEEFEGDTFEKLKTFKCPIVGPRCLLLCFINGEPIPEGKSPVYTTSMRGLCICA
SGFSPQEKEHIEKLVEYMGGIFTKQLRSRVTHLITASVMSAKYETAIEMQIPIVTKKWID
TIWEVNLKEFVKADDSMFDKYKASVFLNLIVTSTNLPKREKEEVKRLISDHGGIFMGPLD
GAKVKVVLAPENSPLSEKLRYARRANIACLTPNWVYESIKVGYALPFKNFLIKSSKACST
PERMNATCETFNCSTISAITCDLQPVNCVDESLLTTISSASTLDLLPNSARSSIVLDRLS
FGEAKSAGPFLDGCNIYLAGFASNQRDKLNKILNVGSATRLDDISDALTHVIVGDENRAA
SDMKLMKSKGLCPYILTLEWLEESVKLKRPAPEENFLFQQKCNVIPTATEPQSPLSKRVS
VQHIRQVKSIYFKITHIFQNLQMLQKPKKVPIPSFDIDKKLSMLEKEKDSDLVQQYLQDT
VVSVNDNTIQEFLKSRTPVTEENNEKTIINDRESQARQLKNTLVSETIQSKPKIDDTEMP
ISQTSTINEKLFEGHTFVVTGFSEEESYVAGTIVAMGGQVVSSTFVGIPDYGVVPKCGAF
LKYTVNEIVTDLFIEDCVNQEVIVDIMYYHRPLSIKKHTNPLSGCIITMSMYTGLERTYL
ATLATELGAMCQDIFVRKTNIEKNTYGSTHLVCPTPEGNKYNAAVKWKLPAVTAEWLKAC
AAHSKRVDETPYLVGETIAPERPNENCSTDTSLSKANTSQMHSPNESMVRNIITPKRHLP
QLQSQDGSSGETPLINKRLSLLMNKTSESPFHVSTPSTPYGQVFKPNPSPETRKGWIKWI
DNFPDLRVEEPPLKRRPPSTPLSELKRQLWQKLKNIDHNQEENAVETLLDTNDRTPAETP
EATESNSTKATTTTPINRKLDFPDENSPQNNEINMQIAQLHQVLQRTSSTPENRYSLSGE
NANTYNAEPSDPIQKFSVKDSQPIDAIVWEDPSHARRLAIHEEQNNMEHVDEESPEESEP
EPPKKRKFMLSGVKDRILYEQVIKDLGGDVSLDTKFDTSATHLLCLRPARNEKMLGSIAS
GKWVLHCMYLRDSEQEGKFLDEEKYEWGNPKSKGIIPDPVGEIEEMIAAAAYRWRLNLLK
EPRGPFNNMVALLLVSDEKYDQFERLINAGGGKVVQARPPYDTSPSEKKITHCFVNIRQV
NQPIDWAMLANKGILCFVPQYLSNYLTETTPSNPRECVIPEFKKYLALLPK
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgaggaaagtcaaattgatacaggtgtaaatctttactttgttgtgccaaat
aaatacaagtctgaagatgattgcacagaagagatgtggcatacatacaataaatgttgc
gaaaatgagttacaaccaatgtggattactgaatctaaatgtgataaaatgaaaccagct
aaaaatgatgtttttataatggaagaatttgaaggtgatacatttgagaaattaaaaacg
ttcaaatgtccgatagttggacccagatgcttgctgctttgttttatcaatggagaacca
atcccagaaggaaagagtccagtatatacaacatctatgagaggactttgtatatgtgct
tctggtttctctccacaagagaaagaacacatagaaaaattagtggagtacatgggtggt
atttttacaaaacagttacgtagtcgtgtaactcatcttataacagcatctgtgatgtct
gcaaagtatgagactgccatagagatgcaaataccaatagttacaaagaaatggattgat
acaatttgggaagtaaatttaaaggaatttgttaaagcagacgatagcatgtttgataaa
tacaaagcatctgttttccttaatttaattgtaacatcgacgaaccttccaaaacgtgaa
aaagaagaagtcaaacgcttaatcagtgatcatggaggaatatttatgggtcccctagat
ggagcaaaagttaaagttgtgctcgcgcctgaaaatagtccattaagtgaaaaattgaga
tatgcaagacgagcaaacattgcttgtttaacgccaaattgggtctatgaaagcataaaa
gttggctatgctttacccttcaagaattttttgatcaaatcatcaaaagcgtgttccact
ccagaacgaatgaatgcgacatgcgaaacttttaattgttcaacaataagtgctataaca
tgtgatctgcaaccagttaattgcgtggatgaaagtttactaacaacaatcagcagtgca
tctactttagacctattacctaattctgccaggtcaagtatagttttggataggctttca
ttcggtgaagcaaagtcggctggtccgtttttggatgggtgtaacatttaccttgctgga
tttgcttctaatcaaagggataagcttaacaaaatattaaacgtaggcagtgcaacgcga
ctcgatgatatatcggatgctttaacacacgttatcgtaggtgatgaaaatagagcagcg
agcgacatgaaactaatgaaatcgaaaggattatgtccgtatatattaactttggaatgg
ctggaggagagtgtcaaattaaaacgacccgcaccggaggagaattttttattccaacaa
aaatgtaatgtaataccaacggctacggaacctcaatccccgttaagcaaaagagtaagt
gtacaacatatccggcaagtaaaatctatctacttcaaaattacacatatttttcagaat
ttacaaatgttgcaaaaaccgaagaaggtacctattccgtcttttgatatagataaaaaa
ttgtcaatgctcgaaaaagagaaagactctgatcttgtacaacaatatcttcaagataca
gttgtttcagtaaatgataatacaatacaagaatttctgaagtcacgtacacctgttaca
gaagagaataatgagaaaactataatcaatgatcgtgaaagtcaagcaagacaattaaaa
aatacattagtatctgaaactatacaaagtaaacctaaaatagatgataccgagatgcca
atcagccagacttccactataaatgaaaagctgtttgaaggacatacattcgttgtaact
ggcttcagcgaggaagagagttatgtagcaggaactattgtggcaatgggtggacaggtt
gtttcaagcacattcgttggtatcccagactatggtgttgtacctaaatgcggcgcattt
ttaaaatatactgtaaatgaaattgttactgacttattcattgaagactgtgtaaaccaa
gaagtaatagttgatattatgtattaccacagacctttgtctattaagaaacatacgaat
ccattatcaggctgtattattacaatgagcatgtatacaggtctagaacgaacatacctt
gcgactttagctaccgaattgggtgccatgtgtcaagatattttcgtacgtaaaaccaac
atcgaaaagaacacgtacggaagcacacatttagtctgcccaacgccagaaggaaataaa
tataatgcggcagtgaaatggaaattaccagctgttactgccgagtggttaaaagcttgc
gctgctcattcaaaacgggtcgatgagactccgtatcttgtaggagaaactatagctccg
gaaagacccaacgaaaattgcagtacagatacaagtttatctaaggccaatacaagtcaa
atgcattccccaaatgaatcaatggttagaaatattattactccaaaacgacatttacct
caattacaaagtcaagatggcagttctggtgagacgccgctaataaataaaagacttagc
ttgcttatgaataaaacatcagaatcgccatttcatgtgtctacaccgagtacaccctat
ggtcaagtatttaaaccaaatccctcgccagagacacggaaaggttggatcaaatggatt
gacaattttccggatttaagggtagaagaacctcccttgaaacgaagaccacccagcacc
cctctttccgaattgaaaagacaattgtggcaaaaattgaaaaatattgatcataaccag
gaagaaaatgcagttgaaacactacttgatactaatgatcgtacaccagcagaaacacct
gaagcaacggaaagtaatagcactaaagcaactacaactactcccattaatagaaaattg
gatttcccagatgaaaacagtccacaaaataatgaaattaacatgcaaatcgcacaatta
catcaagtactccaaaggacatcgagtacacctgaaaatagatattccctttctggagaa
aatgcgaacacatacaatgcagaaccttcagatcctatacagaaatttagcgtaaaagat
tcacaacctattgatgctattgtttgggaagacccaagtcacgcgagacgcctggcaata
cacgaagaacaaaataacatggaacatgttgacgaagaatcgccagaagaatctgagccc
gagcctccgaaaaaacggaagttcatgctctctggcgtaaaggacagaatattatacgaa
caagtaataaaagacctcggtggtgacgtatccttggatactaaatttgataccagcgca
acgcatttgctttgccttcgacctgcaagaaacgaaaaaatgcttggtagtatagcatct
ggaaaatgggtactgcattgtatgtacctccgtgattcagagcaagaaggaaaattcctc
gatgaagaaaaatatgaatggggaaatccgaaaagcaaaggtatcatacccgatccagtt
ggagaaattgaagaaatgatcgcagccgctgcttatagatggaggctcaatttattaaaa
gaaccacgaggaccatttaataacatggtagctctattactagtttctgatgagaagtac
gatcaatttgaacgattaattaacgctggaggcggcaaagttgttcaagcaagaccaccg
tacgacacgagcccgtcagaaaagaagatcacccattgcttcgttaatatcaggcaagtt
aaccagccaatcgattgggcaatgttagcaaacaaaggtattctttgcttcgtaccacag
tatttaagcaactatctcaccgagacaacgccgtcaaatccacgagaatgtgtaattcca
gaatttaaaaagtatttagcgcttctaccgaagtaa
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integrated database retrieval system
