Colletes gigas: 122400860
Help
Entry
122400860 CDS
T07492
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cgig
Colletes gigas
Pathway
cgig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122400860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgig03021
]
122400860
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122400860
Transcription machinery [BR:
cgig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122400860
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122400860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCCH_4
zf-CCHC
Nab2-like_zf-CCCH_
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
122400860
NCBI-ProteinID:
XP_043258514
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MECIVANVDHMRFDIEIALDEQYGALPLPFTGMDKSTAAVCQFYPRGTCVKGASCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCPEGPNCKFMHPRFELPAVQDMQPK
EGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVRQEIEGNSHSAHHMNMHNGPPPRGPQ
KPLEEVTCYKCGTKGHYANKCPKGHLAFLSHAGGSGGGSQNQNYRR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcatagtggcaaacgtagatcatatgcgatttgatattgaaatcgctcttgac
gaacaatatggagctcttccgttaccttttaccggaatggataaatccactgctgctgta
tgccaattttatccaagaggtacttgcgttaaaggagcctcctgtccatttagacatgta
cgaggggatcgtacaattgtatgtaaacattggctaagaggcctttgtaaaaaaggggat
caatgtgaatttttacacgaatatgacatgacaaaaatgccagaatgttatttttactct
agatttaatgcctgtcacaataaggaatgtccattcttgcacattgatccagaaactaag
gtcagagattgtccttggtatgatagaggattttgtaggcatggaccattatgcagacat
cgacacgttcgtcgtgttctatgtatggcatacttggctggattttgtcccgaaggtcca
aattgtaaatttatgcacccaagatttgaattaccagcagtacaagatatgcaacctaaa
gaagggaagaaggtgatgattacgtgtcatttttgcggagaaggtggtcataaagccatt
tactgcaataaaatgccacccgacgtgcgcgaagcacaagttagacaagaaatagaaggt
aattctcattcagcgcatcatatgaacatgcataacggaccgcctcctcgaggaccgcaa
aagccactcgaagaagtcacttgttacaaatgtggaactaaaggtcactatgctaacaaa
tgtccaaaagggcacttagcatttttaagtcacgcaggaggtagcggaggtggaagtcaa
aatcaaaattatcgtagatga
DBGET
integrated database retrieval system
