Colletes gigas: 122400869
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Entry
122400869 CDS
T07492
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
cgig
Colletes gigas
Pathway
cgig03430
Mismatch repair
cgig03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122400869
03460 Fanconi anemia pathway
122400869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122400869
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122400869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Clostridium_P47
Motif
Other DBs
NCBI-GeneID:
122400869
NCBI-ProteinID:
XP_043258541
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MTEPIKTTEKSKKISAINKETVHQICSGQVVLDLATAIKELVENSLDSGATLIDIKLKDY
GKTYISVSDNGSGVLEQDFEGLGLKHHTSKLREFSDLTEVNTFGFRGEALSSLCSLAEVN
IITRHSTSEHGFKLEFDHNGILKKKEACAREKGTTIHIKDIFKCLPVRAKEFYKNIKKEY
TRAIQVLYCYCLVSTDTKITCSNSVSGKPPNLVVNTTSSSNILNNINTIFGKKSSNGLVI
LELLPPDEAMLKEYNLPSNIVMDFEWDCYISSCDHNVGRSTPDRQFFYVNSRPCDLTKVN
KLINHTYHKYNNKQYPFVFLNLKLNKQSTDINVTPDKRTIFCTQERLILATLKFNLITKW
DKLQGNLTATPVIELNFGVKRTISPTNDHPAKRLQTLHTVSSTGHVEKKNIQYDDDNIQS
DTINQIKILDSVEMPISILTIKQKLQERQNISKQAITRTKIKYKAQIDSNQNSKAENELK
RELTKESFIKMEIIGQFNLGFIIARLEEDLFIIDQHATDEKFNYEKLNNEIQLKTQKLII
PKSLNLSSLNETILIEHQKIFEDNGFSFKIDAEAETGHRVELIGIPVSGYWQFGQEDIEE
LIFLIREGGMENKENHIYRPSRVSQMLASRACRAAVKIGTFLNNNEMQKLVMQMAQMESP
WNCPHGRPTIRHLLSLHLTCK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacccattaaaacaacagaaaaatcgaagaaaattagtgcgataaataaagaa
acagttcatcaaatttgttctggccaggtggttcttgatcttgcaactgctataaaagaa
ttggtagagaatagtttagatagcggtgctacattaattgatattaagctcaaagactat
ggcaaaacctatatcagtgtcagtgataatggtagcggtgttttagaacaagattttgaa
ggattagggttgaagcatcatacatctaaacttagagaattctcagatttaacagaagtt
aacacctttggatttcgtggagaagctcttagttccctctgttctttggccgaagtaaat
attattacaagacattcaaccagtgaacatggtttcaaattagaatttgatcataatggt
atactgaaaaaaaaggaagcatgcgcaagagaaaagggaacaactatacatattaaagac
atttttaagtgccttccagtaagggcaaaagaattttacaaaaatataaaaaaggaatat
actcgtgctattcaagttctatattgttattgtttggtttctaccgatacaaaaataacg
tgttctaattcagtgtcgggtaaacctcctaatcttgtagttaacactacaagttccagt
aatattttgaataatattaatacaatatttggtaaaaagtcttctaatggactagttata
cttgaattgctacctcctgatgaagcaatgttaaaagaatacaacttaccaagtaatata
gttatggattttgaatgggattgttatattagtagttgtgatcataatgttggacgttct
actcctgacagacaatttttttatgtaaatagtcgaccatgtgatctcacaaaagttaat
aaattaataaaccacacgtatcataaatataataacaaacaatatccgttcgtcttccta
aatttaaaattgaacaaacaatcgaccgatattaatgtaactccagataagagaactatt
ttctgtacacaagaacgtttaatattagcaaccctaaaatttaatttaataacaaaatgg
gacaaattacaaggaaatttaacagccacacctgtaattgaattaaactttggagtgaaa
agaacaatttctcctacaaatgatcatccagcaaagagattgcagactttacatacagta
tcaagtacaggacacgtagaaaaaaagaatatacaatacgacgacgataatatacaaagt
gatacaataaatcagataaaaatattagacagcgtagaaatgccaattagtattttaacg
ataaaacaaaaacttcaagaaagacagaatatatcaaaacaagcgattacgcgtacaaaa
ataaagtataaagcacaaatagattcgaatcaaaattctaaagccgaaaacgaattgaaa
cgagaattaacgaaagaatcatttatcaagatggagatcataggtcaattcaaccttggt
tttataatagctcgcttagaagaagatctatttattattgatcaacatgctacagacgaa
aaatttaattacgaaaaacttaataatgaaatacagttaaaaactcagaaattaattatt
cctaagtctttaaatttatcttcgttaaatgaaacaatactaattgaacatcagaaaata
tttgaagacaatggtttttcttttaaaatcgatgctgaagccgaaactggacatcgcgtc
gagttaataggtataccagttagtggatattggcagtttggacaagaagatatagaagaa
ctaatttttcttattagagaaggtggtatggaaaataaagaaaatcatatatatcgtcca
agtcgagtaagtcaaatgttagcgtcaagagcttgtcgcgctgccgttaagatcggcaca
tttcttaacaataatgaaatgcaaaaattagttatgcaaatggcacaaatggaaagtcct
tggaattgtccccatggcagaccaactataagacatctattatcgttacatcttacttgc
aaataa
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