KEGG   Colletes gigas: 122400883
Entry
122400883         CDS       T07492                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
cgig  Colletes gigas
Pathway
cgig03030  DNA replication
cgig03410  Base excision repair
cgig03420  Nucleotide excision repair
cgig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122400883
   03410 Base excision repair
    122400883
   03420 Nucleotide excision repair
    122400883
   03430 Mismatch repair
    122400883
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgig03032]
    122400883
   03036 Chromosome and associated proteins [BR:cgig03036]
    122400883
   03400 DNA repair and recombination proteins [BR:cgig03400]
    122400883
DNA replication proteins [BR:cgig03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122400883
  DNA Replication Termination Factors
   ELG1-RFC complex
    122400883
Chromosome and associated proteins [BR:cgig03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122400883
DNA repair and recombination proteins [BR:cgig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122400883
  Check point factors
   HRAD17(Rad24)-RFC complex
    122400883
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 AAA_24 Viral_helicase1 Mg_chelatase Rad17 AAA_11 nSTAND3 AAA_assoc_2 AAA_19 RuvB_N AAA_18 DEAD ABC_tran DNAX_ATPase_lid NTPase_1 AAA_5 RNA_helicase MeaB AAA_28 SRP54 AAA_23 MipZ AAA_25 AAA_29 AAA_30 IstB_IS21 AAA_7 AAA_3 bpMoxR CbiA
Other DBs
NCBI-GeneID: 122400883
NCBI-ProteinID: XP_043258553
LinkDB
Position
Unknown
AA seq 351 aa
MAGVKTGEESMDIEIVPSTSSFNVKNKEKDAKLNLPWIEKYRPHVFSDIVGNEDTVSRLS
VFAQHGNCPNIIIAGPPGVGKTTTILCLARILLGQAFKESVLELNASNDRGIDVVRNKIK
MFAQKRVNLPKGKHKIVILDEADSMTDGAQQALRRTMEIYSNTTRFALACNNSEKIIEPI
QSRCAMLRYGKLSDAQVLTKVIEVCGKENISYTDDGLEAIVFTAQGDMRQALNNLQSTYN
GFGHVNSENVFKVCDEPHPLLVKEMLDFCSEGRICKAYGVMEHLWAMGYSAEDLISNIFR
VCKNLPIDEKLKLEFVKEIGITHLGIVDGINSLLQMNSLLARLCNAAVQHV
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcaggtgttaaaaccggcgaagaatcaatggatatagaaattgtaccatctacaagt
agttttaatgtaaaaaataaggaaaaagatgccaagttaaatttaccatggattgaaaag
tacagaccacacgttttttcggatattgttggtaacgaagacacagtatccagactttct
gtctttgctcaacatggaaattgtccaaatataatcattgctggacctccaggagttggt
aaaactacaacaattttgtgcttagcacgtattcttttagggcaagcttttaaggaatcg
gtgctggagctaaatgcttcaaatgacagaggaatagatgttgttagaaataaaattaag
atgtttgcccaaaagagggtcaaccttccaaagggaaaacataaaatagtaattttagac
gaagctgatagcatgacagatggtgcacaacaggcattgcgcagaaccatggaaatatat
agtaatacgactagatttgcattagcttgtaataatagtgaaaaaattattgaaccaata
cagtcacgttgtgctatgttacgatatggaaaattatcagatgcgcaagttttaacaaaa
gttatcgaagtttgtgggaaggaaaatatttcatacactgacgatggcttagaagcaata
gtgtttactgctcaaggtgacatgagacaagcattaaataatttacagtcaacgtataat
ggttttggtcatgtaaatagcgaaaatgtgtttaaagtttgcgatgaaccacatccatta
ctcgttaaagaaatgcttgacttttgttcagagggtagaatttgtaaagcatatggggta
atggaacatttatgggcaatgggatattctgcagaagatttaattagtaatatattcaga
gtttgtaaaaacttaccgattgatgaaaaattaaaattagaatttgtaaaagaaattgga
ataactcatcttggaatagtagatggaattaacagtttgttgcaaatgaatagtctttta
gctcggctctgtaatgcagctgtgcagcatgtttga

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