Colletes gigas: 122401059
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Entry
122401059 CDS
T07492
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
cgig
Colletes gigas
Pathway
cgig04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122401059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgig03036
]
122401059
Chromosome and associated proteins [BR:
cgig03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
122401059
REST complex
122401059
Heterochromatin formation proteins
Other heterochromatin formation proteins
122401059
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
122401059
NCBI-ProteinID:
XP_043258909
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MKRVRGLDEVASPAAATLKHSSVSAGSGLGGGGGGLEYHSSSGIGVVVPGQAVRSVTSKE
MPGSIQFGTAQAQQQYTGAIVVPTAAPSPIKGSGSAGLTSTCSSSSVNTGGGLHSGIGGG
NNHSMGSQQPTSGTQSQVHSQQQPTIRHKVHSSNVTPLASTPPGTSLGGGSGSQQFQRLK
VEDALSYLDKVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGF
NTFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQPA
KAPPVLQIMQGSGNIHHSLANNISNNSLTVHAPSPPPVQTYNNSHVSAAQAQAVSQALSQ
AQDGIPTSGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKES
GHMGGTSGSGATGGAKHLTEAEVYSQVAKLFENQEDLLAEFGQFLPDATNQQSSLSVMFQ
TNKTATVNDHTTIVKKPLGPKAPYNNSGNISRELRESSGTGTIERESRDHRDRERERDRS
GVRDINSVQKFGHSTGQLKRSPSFTPSVTAGNSHHIQHGPPPLKKHKVSSIRECVTIAEA
GKYGSLNDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLITPFLGRFPELL
RWFKDFLGHLPDSSTTATTNTGSNLNVEALPNNVVRSHQERPQGDLAMEIDYTACKRLGA
SYCALPKSYVQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEESIYRCEDER
FELDGVIETNASTIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGDK
AADIIDGLKKNPIVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINF
KQNDVKALRSKSLFNEIETLYDERHEQVDDGNGDGQNNSGPHLVLPYKDKSVLDDAANLL
IHHVKRQTAIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDMNVAACSNSQ
SITMNASPLGGGLQANRNKAPVSPIPSSTSIKTEPDVKLPIHALSNDPEEAYTLFMGSNN
WYLFLRLHHILCERLTKMYERAVALAEEESRYKQQRKESTAVALRLKPKNEIEIEDYYPA
FLDMVKNVLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDPICQQCM
ELFQREQRQPKESSGAGGLCATAYMRLGAEMAYQRKAEKAMADENCFKIYIYKKDCKMTM
ELLDTEGDEAMDNSCREREREGVTVSEKWSTYVERYSAPAGQTSPKDTPTLTDNEPTTNH
PVSNDQAARGGRGRKRKNTDISKKMDGNGWSSLGRILAGRKPVFLYRNVRQWRKRAARMM
SASMPNTNHPEKGTESTDKDKALDSVDALLKRPSGLRLADSGDTSDIINSDETQCRFNPN
SYQMLYIASKEAFLYKQNSFSRARECHPAVTKHLNSKFHQWLASWASKNVADIQHRLCQD
WLMGRYENLIPHKTRVITDNDQTRSPYRQYNRYRVERLQSDLLTEPCV
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgttcgcgggctggacgaggtagcatcaccagcagcagcaacattaaagcac
tcgtcagtgagtgcaggaagtggcttaggtggcggaggaggtggtttagagtaccattca
agcagtggaataggcgttgttgtacctggccaagcagttcgatcagttacttcgaaagaa
atgccgggaagcatacaatttggaactgcccaagctcaacagcaatacactggagcaatt
gttgtgccgaccgcggctccgtcccccattaagggaagtggatctgcaggacttacttct
acatgtagcagtagcagtgtaaatactggtggaggattgcatagtgggataggtggtggg
aataaccatagtatgggttctcaacaacctacatcaggaacacaaagtcaagttcatagc
cagcaacaaccaacaataaggcataaggttcattctagtaatgtaacaccattagcttca
accccaccaggcaccagcctaggtggtggtagtggatcccaacaatttcagagattaaaa
gtagaagatgcattgtcctacttagataaagtcaagtacaaatttagtgatcagccgcag
gtgtataatgacttcttagatattatgaaagaattcaagtcacaaagcatagatactcca
ggagtcataacacgagtgagtcatttattcaaagggcatcctgaacttattgttggtttc
aacacatttcttccaccgggatataaaatagaagtacaggcaaacgagcaaggatacgcg
tttcaagtatcagtcagtatgccgagtccaacggcaacgcatactgctactttatcgcag
catcattgtacagtaaacgttggttcgccccctgttgcgagtccaccaacacaaccagca
aaagcacccccagttttgcaaataatgcaaggatctggaaatatacatcattctttggca
aacaatatttccaacaatagtttaacagtacatgcaccatcaccaccaccggtacagaca
tacaataattcgcacgttagtgcagctcaagctcaggctgtgagtcaagcgttaagccaa
gcacaagatggaataccaaccagtggacaaactcaacagagtcaaccggttgaatttaac
catgcaattaattatgttaataaaatcaagaaccgattccaaggtcaaccagacaagtat
aaaagatttttagaaattttgcatacgtatcagaaagaacaaaggaatttgaaagagtct
gggcatatgggtggtacgagtgggtccggtgcaactggaggtgcaaagcacttaacagaa
gcagaagtttacagtcaagttgcaaagttgtttgaaaatcaagaagatttgcttgccgaa
tttgggcaatttttaccagacgccactaatcaacagagctcactgtctgttatgtttcag
actaacaagactgctaccgttaacgatcatacaacaatcgttaagaaaccattgggacct
aaggcaccatacaacaattcgggaaatatttcgagagaattgcgagagtcgagcggcact
ggtacaatagaacgtgaaagtcgcgatcacagggatcgtgaacgagaacgtgacagatct
ggcgtacgagatattaatagtgttcagaaatttggccacagtacaggacaattaaaaaga
agtccatcgttcacgccttcggtaacagccggaaattctcatcatatacaacacggtcca
ccccccttgaagaaacataaggtgtcctctatacgcgaatgcgttactatagctgaagct
gggaaatacggcagtttgaacgactatgcgttctttgacaaggttcgtaaagctctgagg
tctcaggaagtatatgaaaattttctacgatgcttggtcctttttaatcaagagatagtg
tccaaatctgagttggtgcagttgataacgccatttctcggtcgctttccggagctttta
cgctggtttaaggattttcttggtcatttacctgactcctctaccaccgccacaacaaac
acagggagcaatttaaacgtcgaagcgctaccaaataatgttgtacgaagtcatcaagaa
cgacctcaaggcgatttggcgatggaaatcgattatacagcatgtaaacgtctaggagcg
tcgtattgcgcgttaccaaagtcatacgttcaaccaaagtgtacagggagaacgcagttg
tgtaaagaagttcttaatgatacatgggtttcgtttccaacttggtcagaggacagtaca
ttcgtaacatcgagaaaaactcaatacgaagaatcgatttatcgctgcgaggatgaacga
ttcgaattggacggtgtgatagaaacaaatgcgtcaacgattagagttctcgaaggtgtt
cacaagaaaatgagtagaatgagtcaagaggaacttcagaaattcaagctcgatgattgt
cttggtggttgttctcctacgattcatcagagggctttgaagaggatatacggcgataaa
gctgctgatattatagacggtcttaagaaaaatcctatagtagcggtaccagtggttctc
cgacgattaaaaagtaaagaggaggagtggcgggaggcgcagaaaggttttaataaaatt
tggagagaacaaaacgagaaatactacttaaagtccctagatcatcagggtatcaatttt
aagcaaaatgacgtgaaagcactaagatctaaaagcttatttaatgagattgaaacgtta
tatgatgagagacacgaacaagtggacgatggcaacggagacggccaaaacaatagcggc
ccgcaccttgtattaccctataaagataaatctgttctagacgatgcagctaatcttctt
attcatcacgtaaaacgtcaaacagctatccacaaagaagataaacaacgaataaagctt
ttattgaagcattttatacctgatcttttctttcatccacgccaggagcttagcgacgac
gaaagggacgaagatgatgaaaaagaagatatgaatgtagcagcgtgtagcaattctcaa
tcaataacgatgaatgcttctccgttgggtggtggtcttcaagcgaataggaacaaagcg
ccggtatctccgattccgtcttccacgtcgattaaaaccgaacccgatgtaaagctaccc
attcatgccctgtcgaacgaccccgaagaagcgtacacgcttttcatggggagtaacaat
tggtacctctttttgaggttacatcacatcctgtgcgaaaggttgacaaaaatgtatgaa
agagcagtcgcccttgcggaagaggaatcgcggtacaagcagcagcgcaaagaaagtaca
gccgtcgcattaagattaaaacccaaaaatgaaattgaaattgaggactattatcctgca
tttttggatatggttaaaaatgtcctggacggtaacatggagagcaccgcgtatgaagat
acgttacgagaaatgttcggtattcatgcatatattgccttcacgttggataaggttgta
acgtatgctgtgagacaattgcagcatttggtttcggatcccatatgccaacaatgcatg
gaactatttcaacgagagcagcgtcaaccaaaagaaagtagtggtgccggtggtttgtgt
gctactgcatatatgagacttggtgcagaaatggcgtatcaacgtaaagctgagaaagcc
atggcagacgaaaactgttttaaaatatacatatataaaaaggactgcaaaatgacaatg
gaattattggatacagagggtgatgaggcaatggacaacagttgtagggaaagggaaagg
gaaggagttacagtgtctgaaaaatggtctacgtatgttgagaggtattctgctccagct
ggacagactagcccgaaagacacccctaccttaacagacaatgagccaacaaccaatcat
cctgtgagtaacgaccaggcagcaaggggggggaggggcagaaagcgcaagaacactgac
attagcaagaagatggatggaaatggttggagttctttaggcagaatcttggcaggccgt
aaacccgtatttctgtatcgtaatgttagacaatggaggaagagagctgctagaatgatg
tcagcatccatgcctaatacaaatcatcctgagaaaggcacagaatcaaccgataaagat
aaagcattggattctgtagatgcacttttaaaacggccttctggtttaagattagcagac
tctggagatacatctgacatcatcaattctgatgagacacaatgcagatttaatcctaac
agttaccaaatgctttatattgctagtaaggaagcattcctttataaacaaaattcattc
agccgtgccagagagtgtcatccagctgtgacgaaacatttgaactcgaagttccatcag
tggcttgcatcttgggcgtctaaaaatgtggcggacattcagcatcggttgtgccaggat
tggttaatgggacgttacgaaaacttaatccctcataaaacacgagtgatcacagataat
gaccaaactagatcaccttaccggcaatacaatcgttatcgtgtagaacgcttgcaaagc
gaccttttaacggaaccatgtgtataa
DBGET
integrated database retrieval system
