Colletes gigas: 122401758
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Entry
122401758 CDS
T07492
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgig03021
]
122401758
Transcription machinery [BR:
cgig03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
122401758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
122401758
NCBI-ProteinID:
XP_043260037
LinkDB
All DBs
Position
Unknown
AA seq
1985 aa
AA seq
DB search
MTHPSHQTNGASLEDCHTNFFALTDLCGIKWRKLVWGEVAGGFGGTPLEDPVLSSFSRCL
AGDILCVWRRVAATPATSGPTTTTGAGAGIFDLGIAPSPAPPPLSLTAAKELWIFWYGEE
PDLSGLVSPELIACESEQGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGKWFVQP
YDGFEKHRCSSSHLSFSFAFFVHGESTVCASVDVRQHPAVRHLTRACLQRTQTSQSSVKV
ILAPHGLAGTLTGPVGRTDSQLLEEWKHFYPINGSNVEAGLPPLVEVLVGGVRMRYPSCY
VLVTDMDDTPPETPLSPPSSPASCEHPLLGQQELRAATELPERAWAECTLSSPISASKTE
SSTEHGTWIFIDPTQKSSCTCSKYATPGGWKSLASSQVQRERVDKGGRRVVPFHRRSTTQ
WDACPSVPANAPRSVLNRTEAPSTPPGGPPSYSRGPPTGGDCLPVPSVGSPGSPAPSPLP
TPHSEPASVPPAEPTMPTLSPQPPPSHTNTAPPLTPSQGPKSTSSACNNQVHSPAPGPTL
KRPVLVSRECEDIYLENEQSLPWLYDYSTQEAWLNHPVKRFKESNSSPVNVRSNTLYPPM
NSQVPQSQAPKLEIKQEPNVNVGDCIGRRTDPYEFDATGDENGTGVDGLRRQRDDPSKPG
SLFTSEGLQASYKDLDQIFDNSDPDTSSDETNLNQLQVQTPPESNRSSGLHEETRVDTNN
RHNNRGVGVLRPEELSKMFPTPPSLEHNPVASPCQLNDPLMDQTELSVPQRPLRHLPDIY
PNMGSPQEEPIDDWSYVFKPTSICKMVGSSKYAPLTNLPSQSLPPVTLPSHCVYRPSWQC
NPAPSNSEKPLPPTRPGSVQQQPCPPSPAPLGAPYRSATISGRPPPPPYDQPSPATSTTS
SYLNKNLNSIEADTPGPTRAPESNSLIVNILLGDTALNIFRDHNFDSCSLCVCNAGPKVV
GNIKGADAGVYLAHSWSGGALFQDDDQIRCSCGFSAVVNRRLAHRAGLFYEDEMEITGIA
EDPTEKKKTSLVAIACGGAKPSEGLDAIPPNVLELLREQCLIIQSSASSLYRASRIYAAM
KSYSMLTPTVNMLEFNDGNEVSLAALDQGKIDGTHNERTNRVNGVHRWVFLRAKGPQCSG
DIVRMMRALQPLLEDAVQKKCTTRMWEAPYTVAGPLTWRQFHRLAGRGTDDRCEPQPIPA
LVVGYDRDWLSLSPYALSYWEKLLLEPYAGPRDVAYVVVAPDSDCVIDKVKSFFRELSTT
YEICRLGRHTPISKALRDGILRVGKSSVQNKVKQPIDDWFKLLGENQLGELLRLYAQVCN
HRLAPYLTQVIQDRSLLDPGDTQLTNKQQQQQQSTIPVTDTMPATPDVMTSKPESVEGEN
PRSETPSNTATNSNSNTGNTTPTSQTATIPTNTTAGPDEEEAEPPAVVVYLIEPFSLGSP
EDPDRRRLAILALLRAYSAAVNSMPENVRSNINVQLISLESIMELGRARERRRIQDEMRA
LALNVFLQGRRLLNHNSTVKSLTGFGTAAAADLFLKSKDERNKAPYRLYAPAYVLAPLRA
KSEAPESFGIAGPEECAVLYLSYCLSEDQSWLLAVATDDRGEIFETATINIDIPNRKRRK
RASARRIGLQKLMDFILSVMSQGVQPWRLVVGRVGRIGHGELKGWSWLLSRKALLKASKH
LKELCGQCSLLYPSAAPCVLSACLVSLEPDSTLRLMADQFTPDERFSQASVNCQLSTPQD
VTCTHILVFPTSATTQSSQTAFQEQHINGPELGDDELFSALNDDMPEGMEGMGDFNDIFN
VWPEAGAGGGQSPGGSPHRPEGSPLGGDGGGSGLGNHDGPGSPFPCSNTPRVTVAEQIEE
VGTLLQQPLALGYLVSTAPTGRMPPWFWSACPHLEGVCPVFLKNALHLHSPAIQQNSDDL
LQQQSALTAHPLDSQYTTDVLRYVLEGYNALSWLAVDANTKDRLSCLPVHVQALMQLYHA
AAALV
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccgtcgcatcaaacgaacggcgctagcctggaggactgccacacaaatttc
ttcgcactgacggacctctgcggcatcaaatggaggaagctcgtgtggggcgaagtggcc
ggcggtttcggtggcactcccctcgaggacccggtgctctcgagcttctcgcggtgcctc
gcgggtgacattctctgcgtgtggcgacgagttgccgctacaccggccacgtccggcccg
acaaccaccacgggggccggggctggcatcttcgacctgggcatcgcaccctcgcctgca
ccgccacccctatctctcaccgccgccaaggaactctggattttctggtatggcgaggaa
cctgatctctctggtcttgtgtcaccggaactcattgcgtgcgaaagcgaacagggttca
tgggaaagcggattgtcgtacgagtgtcggtcacttcttttcaaagctctgcataacttg
atcgaacgatgtttactgtctcgtgattttgttcggctaggaaagtggttcgtacagccc
tatgatgggttcgagaaacaccgttgcagtagtagtcacttgtcgttctcgttcgcattc
tttgttcatggagagagcactgtatgtgcaagtgtggatgttaggcaacaccctgctgtt
cgtcatcttacaagggcttgtttacaacgtactcaaacctcccaatctagtgttaaagtg
attttagctcctcatggactagcaggcacattaactggcccagtggggcgtacagatagc
caacttcttgaagaatggaaacacttttatccaatcaacggcagtaatgtcgaagcagga
cttccaccgctggtggaagtgcttgtcggtggtgtacgcatgcgatatccttcttgttat
gtcctggtcacggatatggacgacactccacccgagactcctctttctccgccgagtagc
cctgctagttgcgaacatcctcttctaggtcagcaggaactacgagcagctacggaatta
ccagaacgtgcgtgggcagaatgtactttgagttcaccaatatctgcttccaagacagaa
tcttccactgaacatggaacttggatcttcattgatccaacgcaaaagtcttcctgtacc
tgttcaaagtatgcgacccccgggggttggaagagcctggcctcctctcaggttcagagg
gaaagagtagataaaggtggacggagggtcgtaccgtttcatcgacgctctaccacccag
tgggatgcttgtccctctgtccctgctaatgcccccaggtctgtattgaacagaacagag
gcgccaagtacaccaccaggtggaccaccctcttattcaagaggaccaccgacaggagga
gattgtctgccagttccatctgttggctcgccaggctctcctgcaccttcacctcttcca
actccacattccgagccagcgtcggttccaccagcagagcctacaatgcctactcttagt
cctcaaccgccacccagtcatacaaacactgccccaccattaaccccttctcaaggccca
aagtcaacctcctctgcatgcaataatcaagtgcatagtccagctcctgggccaacatta
aaacgaccagtcttagtctccagagaatgtgaggatatatatttagaaaatgaacagtca
ttaccttggctctatgattactcaacacaagaagcatggctcaatcatcctgtgaaacgt
tttaaggaatctaatagtagtccagtcaatgtgcggagcaatactttgtatccaccaatg
aattcccaggttcctcaatctcaagctccaaaattagaaattaagcaggaaccaaatgtc
aatgttggagattgcatcggaagaagaacagatccttacgagtttgatgcgacaggtgat
gaaaacggaacaggtgttgatggacttagacgacaaagagacgatccttctaaaccaggg
tctttgttcaccagcgaaggtcttcaagcatcctataaagatttagaccaaatcttcgat
aattccgatcccgacacctctagcgatgaaaccaatttgaatcagcttcaagtacaaact
ccaccagaatcaaatagatccagtggactgcacgaagaaactagagtagataccaacaac
agacataataatcgaggagtaggcgtattgcgaccagaagaactttccaaaatgtttcca
acgccaccatccttagaacataatccagtcgcttcgccttgtcagttaaacgacccttta
atggaccagacagaactttctgtgccccagcgaccacttaggcatctccctgatatctat
ccaaatatgggatcccctcaagaagaaccaatcgacgattggtcctacgtgttcaagccc
acgtccatctgcaagatggttggttcttccaaatatgctcctctcacgaatctgcccagt
caatctttaccacccgttacactgccatcacactgcgtatacagaccttcctggcagtgt
aaccctgctcctagcaattcagaaaaaccgcttccaccgactagacctggttctgttcaa
caacaaccgtgcccaccaagcccagcaccgttgggagcaccctatcgctcagcgaccatt
tccggtagaccaccgccgcctccgtacgatcaaccgagcccagctacatctaccacttct
tcgtatctgaacaaaaacttgaatagtattgaagcggacacaccgggacctactcgcgca
ccagaatcgaactctctcatagtgaatattctcttaggcgacaccgcgttgaacatcttc
cgcgatcataatttcgacagttgcagtctatgcgtgtgcaatgcaggcccgaaagtggtt
ggtaatataaaaggcgcggatgctggtgtttatctggcacactcgtggtcgggtggagct
ctctttcaagatgacgatcaaatcagatgcagttgtggcttcagtgcagttgtaaaccga
cgactggctcatcgggccggattattctacgaagatgaaatggaaattaccggtatcgcg
gaagatccaacggagaagaaaaagacatctttggttgctatcgcgtgcggaggggctaaa
ccatccgaaggtttagacgcgataccacctaacgtgttagagttgctgagagaacagtgt
ctgatcatacagagctccgccagcagcctctatagggcgtccagaatctacgctgcgatg
aaaagttactcgatgctcacgcctacggtgaatatgttggagtttaacgatggaaacgaa
gtgtcactggctgctcttgatcagggtaaaatcgatggtacacataacgaaaggactaac
cgtgtgaatggcgtacatcgatgggtgtttctccgagcgaaaggtccccagtgcagcggt
gatattgtacgaatgatgagagcgctacaaccattgttggaggatgcagtgcagaaaaag
tgcactactcgaatgtgggaggcgccgtacaccgtcgctggtcctcttacttggaggcaa
ttccatcgtttagccggtcgtgggactgacgatcgttgtgaacctcagccaataccagct
ttagtagtcggatacgatcgggactggttgtctttatcgccgtatgctctaagctactgg
gagaaattgcttttagaaccgtatgctggacctagggatgtcgcttatgtggtagtagca
cccgacagtgactgcgttatcgataaagtcaaatcatttttccgtgaactatcgactacg
tatgaaatctgtcggttaggaaggcataccccgatctcgaaggccctgcgcgacggcatt
cttcgagttgggaaatcgtctgtacaaaataaagttaaacaaccaattgatgattggttc
aaacttttaggagaaaaccaattaggagaactattacggttatacgctcaagtctgtaat
caccgattagccccatatttaacgcaggttatacaagatcgaagtttgttagatcctgga
gatacacaattaaccaataagcaacagcaacagcaacaatcgactattcctgttaccgat
acgatgccagccacgcctgacgtaatgacaagcaaacctgagtctgttgaaggagagaat
cctagaagtgaaactccatcgaacacagcgacaaattctaattctaacactggtaacacg
acaccgacttctcaaactgccacgatacccacaaacaccactgcgggtccagatgaagag
gaagccgaacctccggctgtggtcgtttatctgatagaacctttctcgctgggaagccct
gaagatcctgatcgtcgaagacttgcaattttagctttattgcgtgcttactcagcagca
gttaatagcatgcctgaaaatgtcagatccaatatcaacgttcagttaatatcattggaa
agtataatggagttaggacgagctagagaaaggcgaaggattcaggacgaaatgagagcc
ttagcgttgaacgtgtttctacagggccgccgattgttaaatcacaactccacggtaaaa
agtctcactggctttggtactgctgccgctgcagatctttttcttaagagtaaagatgaa
cggaacaaagccccgtaccggttatacgcaccggcttacgtcctggctcctctacgagcg
aaaagcgaagcacctgaatcctttggtattgctggaccagaggaatgcgcagttctgtat
ctgagctattgcctcagcgaggatcaatcctggctgctcgcagtcgcgactgatgacagg
ggcgagatattcgagacggctaccattaacatcgatatacccaacagaaagagaagaaaa
cgcgcctcagctagacgaatcggattacaaaaattgatggatttcatacttagcgtgatg
tctcagggtgtacaaccttggagattagtcgtaggtcgtgtgggacgcattgggcatggc
gaactaaaaggatggagctggttactatctaggaaagcacttctaaaagcctcaaaacat
ctgaaagaattatgcggccagtgtagccttctgtatccatcggcagcaccttgcgtactc
agcgcctgtttagtttcgcttgaaccagattcaactctcagactgatggctgaccagttt
acacccgatgagagattcagtcaggcatcagtaaactgccaattatctacaccacaggat
gtcacgtgcactcacattctcgtctttcccacatctgctaccactcagtcatcacagaca
gcatttcaagagcaacatattaatggaccagaactaggggatgatgaactattttctgct
ctaaatgatgacatgccagaaggtatggaaggtatgggagacttcaacgatatttttaac
gtatggccagaggctggggctggtggaggacaaagtcctggtggcagtccacaccgtcct
gagggatccccactgggtggagatggtggtggctcgggtttaggcaatcacgatggtcct
ggtagtccatttccatgtagcaacactccaagagtaacggttgctgaacagatagaagaa
gttggaacactattgcagcaaccacttgcactcggttatttagtatctactgcaccgaca
ggacgcatgccaccgtggttttggtcagcttgcccccatcttgaaggcgtttgcccagtg
ttcttgaagaatgccttacatttgcatagtccagcaatacagcagaatagtgacgatcta
ttacaacaacaaagtgcactaactgctcatccactagactcacaatataccaccgatgtg
ctcagatatgtgctggagggatacaatgcattatcatggcttgcagtggatgcgaacacg
aaggatcggttatcctgtttgccagttcacgtacaagcgctcatgcagctctaccatgca
gcagcagctctcgtctga
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integrated database retrieval system
