Colletes gigas: 122401879
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Entry
122401879 CDS
T07492
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122401879
09123 Folding, sorting and degradation
03018 RNA degradation
122401879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122401879
03041 Spliceosome [BR:
cgig03041
]
122401879
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122401879
mRNA degradation factors
5'-3' decay
Lsm complex
122401879
Spliceosome [BR:
cgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
122401879
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF8649
Motif
Other DBs
NCBI-GeneID:
122401879
NCBI-ProteinID:
XP_043260234
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
MVLNFINKNKTLYTIINKCEMSRKEALSQFIQQIHGRPVVVKLNSGIDYRGVLACLDGYM
NIALEQTEEYVNGQLKDKYGDAFIRGNNVLYISTQKRKT
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggttctaaattttataaacaaaaataaaacactgtatacaataattaacaaatgcgag
atgagtcgaaaggaagcattatctcaatttattcaacagatccatggtcgtcctgttgtt
gtgaagttaaatagtggtatagattatagaggtgttttagcatgtctcgatggttacatg
aatattgcacttgaacaaaccgaagaatatgtgaacggccagttaaaagacaaatatggc
gatgcttttatacgtggtaataatgtattatatatcagcacacaaaaacgtaaaacttaa
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integrated database retrieval system
