Colletes gigas: 122401926
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Entry
122401926 CDS
T07492
Name
(RefSeq) nuclear pore complex protein Nup153-like isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
cgig
Colletes gigas
Pathway
cgig03013
Nucleocytoplasmic transport
cgig03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122401926
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122401926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122401926
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122401926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
DUF7129
Motif
Other DBs
NCBI-GeneID:
122401926
NCBI-ProteinID:
XP_043260287
LinkDB
All DBs
Position
Unknown
AA seq
1575 aa
AA seq
DB search
MAKGSNNLSGRRSSSHNTKPYDANNSFVKKVATKVTDFIPQRSWISKWFNSSQNEGDALD
DNENAEEVESEEEIQKPPPLKRPCIRMDVTHPPGTFLIQTRAKAPVNKASSSKQQYSICN
EMSEDFSEPAMAGPSRMSHLISSTPAMPTDIRNIAQQRSELNSITVATNNGTTNGTDDNS
ESSESTSGCSSLIPQINRQEAPSNVSYNSSFSNRKSFNNDKLTFTNRMQSPRSLFLDSNR
DSLSNRRPSFNASVMTNTSDRASPLSSPFYSGNTTFGGANAAGLYKRSRTLFNSSNEIQL
KVPRRTSVEVKPSNTTGVDSSGMSQTAKKILEALEHFSSPITDAKKIPLKMINNTSSTSK
KRTREETSPTVKVGLRHLTRELTVPNVPDILKLRRRQKLQNITSAVRKIVSARTEPPPLQ
EYHLRTQADEGSKHHGKLKVKTANLDEEDTVEPVNLPSIPLPISSLPNFNFMSPVNSKTV
DKSCVDKEETFTFASPIKVTNITQNLKSINNFTFSRPITADKQSIDNSNNSSSPLKRVNA
KSTSPSNCVPTVTQNFMWSTSSTAPRPKEKTKNRDSPVPTTSNELKSGSVMDILDTKSNK
TGPEKSSETKMQVELNKDSINNKANAVTLDTNKNDIIIASSKPDTQQDTSNMWECLECLI
KNSNSETQCITCKTTRRSPNDNKASELLPSSSNISESKTTTNDHFGSQFKMSNNQWECTS
CYVRNKETDQKCVACTSVRSDSNHSKLATTKLPNSDLNNMKSLEESWECSNCALRNSANS
VTCSSCDIPKSNLLKTSPKNDKSFTDEINTVASQKTGMPINTSLNTSTVTKSESMDKFKP
SKETWECPCCMVRNVISVDSCPCCNTAKPNTGNATKTVPSLVANGFGDKFKKPEGAWNCD
SCMLQNEAKVTECVACGGVKPGSKKLDNSTTNTSSNLQFSFGMPSNTGGFKFGISKDDQQ
KTDNVTPMNNFKFGESQESSQVGQFTFGIQREEKKTSSGSLQSENSASLTVGSGFGLLVN
PKTIEKTDQKQDSEKVEEKPMSSFSFGMPKTENAAAENDKQSVNVASTIQSATLPSIFTF
GVSKSEIKQPDIEKGKQDSLLANSVTEVSKPSTKTTESSTITSASTLTSITQSSSQELKS
TPLFTFGVPNSTVAVSSSAPTSVITSLPSSTQSSFVFPETKPAQTTPVPTFGQIPSASAS
TPSSTFTFGENKTKEGTSATKTFGALPNGSSGSSIFSNISSTPSLFGTSDAKTTATFGSE
KNKQPTFGTTASKPSAFAIPGTKVPTFGSIENKHSIFGSSDTKIPVFGSTDTKPAPLFNP
TPQAPASTTTSTFSAPSAAPSLFGSSVTPVFGNNTSATFSTESKPNIFGSTAKSSETNTP
NSNLFTFNATPAQPVAQLGSGFKFSANTNPTGSTQKPLFTFGSNTSTPKSSNVFGGTFNN
PGSSNSSGFTFNTPPKPEAPAFGQSTVTTPIFGAPQSGSQDQPLSSFPSAPANTGFNFGS
TAAATPSGGFNFGAVAPASATSAGFNFNPPSATPTFDPNTPPSFNFTGGNAPPMFSGTPQ
GLAHRKIKKAFRRMR
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagggagtaacaatttaagtggaagacggtcatcgtcgcacaatacaaagccc
tacgacgcaaacaattcatttgtaaaaaaagtagcaacgaaagtgacagattttatacca
caaagatcatggatcagtaagtggtttaactcgtctcaaaatgaaggtgatgcgttagat
gacaatgaaaatgctgaagaggttgaatccgaagaagaaattcaaaaacctccaccttta
aaacgaccatgtattcgtatggatgttactcatcctcctggtacattcttgattcaaaca
agagctaaagctccagttaacaaagccagttcttctaaacaacaatattccatatgtaat
gaaatgtctgaagatttttctgaacctgcaatggctgggccaagtaggatgagccattta
atatcttccacgcctgcaatgccaacagatattaggaatatagcccaacagaggtctgag
ttgaattctataactgttgccacgaataatggaactacaaatggtacagatgataattct
gaatccagcgaaagcaccagtggctgcagctctcttattccacaaataaatagacaagag
gctccatcaaatgtctcgtataactcctcattttcgaatcgaaagagttttaataatgac
aaattaacttttactaaccgtatgcagtctccaagatctttatttttagatagtaatcga
gattccttaagcaaccgtagaccaagctttaatgcatcggtcatgacaaacacgtcggat
cgtgcatcgccattatcgtctcctttttacagcggaaatactacttttggtggagcaaat
gcagctggtctttataaacgaagtcgcactttattcaacagttcgaacgagattcaactt
aaagttccaagaagaacaagcgttgaagtaaaaccatctaatacaacaggagttgattca
tctggtatgagtcaaacggctaagaaaatattagaagcattagaacacttttcatcgcca
ataactgatgctaaaaaaattccattaaaaatgataaataatacatcatcaacaagtaaa
aagagaacaagagaggaaacatcgccaacggttaaagttggattgcgccatttaactcgt
gaattaaccgtaccaaatgtgcccgatatattaaaattgagacgtcgtcaaaaactacaa
aatataacatctgcagttagaaaaattgtttcagcacgaactgaaccaccacccctacaa
gaataccatcttagaacacaagctgatgaaggttcgaaacatcatggaaaacttaaagtt
aaaacagcaaatcttgatgaagaagacacagttgaaccagtcaatttaccaagtatacct
ttgccaatatcttctttacctaattttaactttatgtcacctgttaattcaaaaacagta
gataaaagttgtgtggacaaagaagaaactttcacgtttgcaagtcctataaaagtaaca
aatattacacaaaatttaaaatctattaacaactttacatttagtagaccaattacagct
gataaacaatcaatcgataactctaataattcaagttcacctttaaaaagagttaatgct
aaatctacatcacctagcaattgtgtacctactgtaacacagaattttatgtggtctact
tcatctacagcacccagaccaaaagagaaaacaaagaatagagacagtcctgttcctact
acttcgaacgaattaaaatcgggaagtgtaatggatattcttgatactaaatctaataaa
actggacctgagaaatcgagtgaaacaaaaatgcaagtagagttaaataaagattctatt
aataacaaagcaaacgcagttactttagatacaaataaaaatgatattatcattgcaagt
tcaaagcctgatactcagcaagatacttcgaatatgtgggagtgtttggaatgtttgatt
aaaaacagcaattctgaaacacagtgcattacttgcaaaactaccaggcgaagtcctaat
gataataaagctagcgaattgttaccatcgtcgagtaatatcagtgaatcaaagactaca
accaatgatcactttggatcccagtttaaaatgtcgaataatcaatgggaatgtacatcg
tgttatgtaagaaacaaagaaactgatcaaaaatgtgttgcgtgtacctcggttagatca
gactccaaccatagcaaattagctacaacaaaattaccaaattctgacctgaataacatg
aaatccttggaagaatcttgggaatgctctaattgtgcactaagaaattctgcaaactct
gtgacgtgctcttcttgcgatatacctaagtcaaatttgttgaaaacaagtcctaaaaat
gataaaagtttcacggatgaaataaataccgtagctagtcagaagactggtatgccaatc
aatacatcattaaatacttcaaccgtcactaaaagtgaaagtatggataaatttaaacca
agtaaagaaacatgggaatgtccttgttgtatggttagaaatgttatttccgtcgattct
tgtccatgttgcaatacagctaaacctaatacaggaaatgcaactaaaaccgttccctcg
ttagttgcaaatggatttggagataaatttaagaaacctgaaggtgcatggaattgtgac
tcttgtatgttacaaaatgaggcaaaagttacagagtgtgttgcttgtggtggtgtaaaa
ccaggatcaaagaaattagacaattcgactacaaatactagttccaatttacaatttagt
tttggtatgccttcaaatactgggggttttaaatttggaataagtaaagatgatcaacaa
aagactgataatgtaacacctatgaataattttaaatttggtgagagtcaagaaagtagc
caagttggtcaatttacatttggcattcaaagagaagaaaagaaaacatccagtggatca
ttgcaatctgaaaacagtgcctctttgactgtaggaagtggttttgggttattagttaat
ccaaaaactatagaaaaaactgatcaaaagcaagattctgagaaggttgaggaaaagccg
atgtcgtctttttcatttggtatgccaaaaactgaaaatgcagcagcagaaaatgataag
cagtctgtaaatgtagcatctacaattcaaagcgccacacttccgtctattttcacgttt
ggtgtatcaaaatctgaaattaaacagccagatatagaaaaaggaaaacaggactctttg
cttgcaaattctgtgacggaagtttcaaagccaagcacaaaaactactgaatcttctacc
attactagtgccagcacgttaacttcaattactcagagcagttcacaagaacttaaatca
acacctctctttacatttggtgtaccaaacagcacggttgcagttagcagcagtgcccct
acaagtgtaataacaagtcttccgtcttctactcaatcttcctttgtatttcctgaaaca
aagccagcacaaacaacacctgtaccgacttttggtcaaataccatcagcttctgcttct
actccgtccagtacctttacatttggagagaacaaaacgaaagaaggaacttcggcaact
aaaacgttcggtgcattaccaaatggctcctccggaagttcaatattttcaaacatttca
agcactccgtcattgtttggcactagcgatgcgaagactacagctacatttggatcagaa
aagaacaagcaacctacatttggtaccactgcaagtaaaccatctgcttttgcaatacca
gggactaaagtgccaacatttggcagtatagaaaataaacattcgatttttggatcatcc
gatacaaaaatacctgtatttggaagtacagatactaaaccagcacctctattcaatcca
actcctcaagcgccagcatcaacaactacatcaacttttagtgcaccgtcagccgcacca
tctctttttggatcatccgttactcctgtctttggaaataacacttctgcaacattttct
actgagtcaaaacctaatatatttgggtctactgcaaaatcaagcgaaaccaatacacca
aattcaaatttattcactttcaatgccactcctgctcaaccagtagcacaactagggtct
ggtttcaagttttctgcaaatactaatcctactggatcaactcagaagccattatttaca
tttggtagtaatacaagtacaccaaagagtagtaatgtatttggaggaacattcaataac
cctggatcgagcaattcttctggctttacatttaatacacctcctaagccagaagcacca
gcatttggtcaatctaccgttactacaccgattttcggtgcacctcaatctggatctcag
gatcaaccgttatcctcatttccatcggctcctgcaaatacaggattcaattttggatct
acagcagctgctacaccttcaggcggattcaatttcggcgcagttgcaccagcctccgca
acatccgcaggatttaatttcaaccctcctagtgctacaccaacatttgatcctaatact
ccgccgtcgtttaatttcactggtggcaacgcgcctccaatgttcagtggtactcctcaa
ggtttggcgcatagaaaaatcaagaaagcttttagaagaatgcggtag
DBGET
integrated database retrieval system
