Colletes gigas: 122402086
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Entry
122402086 CDS
T07492
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cgig
Colletes gigas
Pathway
cgig03030
DNA replication
cgig03410
Base excision repair
cgig03420
Nucleotide excision repair
cgig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122402086
03410 Base excision repair
122402086
03420 Nucleotide excision repair
122402086
03430 Mismatch repair
122402086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgig03032
]
122402086
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122402086
DNA replication proteins [BR:
cgig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122402086
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122402086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
RuvB_N
PTCB-BRCT
BRCT_2
AAA_14
AAA_33
AAA_5
RNA_helicase
AAA_30
AAA_assoc_2
AAA_17
NrS1-pol-like_tail
AAA_18
AAA_16
AAA_19
Motif
Other DBs
NCBI-GeneID:
122402086
NCBI-ProteinID:
XP_043260544
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MPKDIRSYFQSVKTSSTSTPTKAVKRRIVISSDENDEKTPSPVKRPKKTKKLGDKPISFN
SDEHTKLQKIVSPSNIFGKKPIRRQEAQKVQKVSKQLQKKEAKSHNDDDFEATLVELDTS
DIEQKYLAEIKSDTDSFNSKHKEQGSHTTSTKNEEKKTTPPKDKVNDEEKITPVKNKHNV
KEKKTPEKSNLEQKDETHILKNKKSSNDSTSEDIEHADSEVSNKFKSKKKHSTSKIEIEH
KVLKRKVSPKKSEASDIYEERLEKKKQNVAMYQQYLQRGGARHPGSKEIPEGAEYCLAGL
SFVITGVLDSLEREEADELIQKYGGRIVSQVTKKTNYVIVGDQAGPSKLSKATSFNIKQI
SEDDLLEMIRTRNAGHAHDVLQSRTKSKDRTKRKDRESEDTSPSPTKKMKTILNQETEKL
EKICSPHKKEHIDKNTEKRISSSKEFSYKKRSDNKDTIEVAKILSSPKKEQTEVHESFIQ
NKKEINDAKCVQIKTDSLQDINGNIQTQALVEKYRPKTMKQILGQQGDKSNAKKLHKWLM
NWHKNQSGQVKHTKPSPWAKSDDGAIFKAALLSGPPGIGKTTTAQVVCNELGFDLVEFNA
SDTRSKKLLQQEVAELLSNTSLKDYFIDNKNKPTSKHVLLMDEVDGMAGNEDRGGLQELI
ALIKSTDVPIICICNDRNNPKMRTLANYVFDLRFSKPRIEQIRGAMKSICYKENITMSTE
DLDRLIESTNQDVRQIINYLALFVGKTGRQEKSQKQHVNKDLKLGPWDVIKKVFSAEEHK
HMNIHDKSDLFFHDYNIAPLFVQENYLLVTPQGQRDELLAKVAESAKSLALGDIVEKSIR
SNGAWSLLPVQACYSSVIPGTVMSGYISSQINFPSWLGRNSKARKFDRMIQEITVHSRLA
TGVSKEAINMDYIKPLRDAIVRPLAVNGTEGIDEAMNVISHYHLLREDLDSLIETSLWPG
DRDPMQVVDSKVKAAFTRTYNKNSVVVPYTVSGTSKKKAANEEVETYLEENEAVEANSDD
NDDNAETDKMIKVKKPTASKKTESKRNNNDKTEMKGKKSDKPSKRGRGRGKTK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagacatacgatcctatttccagagtgttaaaaccagttctacttctacaccc
acgaaagcagtaaaaagacgcatagtaatttcatccgatgaaaatgacgaaaagacaccg
tcacccgttaagcgaccaaagaaaacaaaaaagttaggagacaaacctatatcattcaat
tctgatgaacatacaaagctacagaaaattgtttctccttctaatatctttggtaagaaa
ccaataagaagacaggaagcgcagaaagtacagaaagtatcaaaacaattgcaaaaaaag
gaagctaaaagccataatgatgatgattttgaagctactttggtcgaattggatacatct
gatatcgagcagaaatatttagcagagattaagtctgacacagattcatttaatagtaaa
cacaaagaacaaggttcacacacaaccagtactaagaatgaagagaagaaaacgacacct
cctaaggacaaagttaatgatgaagaaaaaataacgcctgttaagaacaaacacaatgtc
aaagagaaaaagacacctgaaaaatcgaatttagaacaaaaggatgaaactcacatacta
aagaataaaaagtcttctaatgacagtacaagtgaagatatagagcatgcagattctgaa
gttagtaataaatttaagagtaagaaaaaacattccacatccaaaatagaaatagaacac
aaagtactgaagaggaaagtatctcctaaaaagtcagaagcatcagatatatatgaggaa
agacttgagaaaaaaaagcaaaatgttgcaatgtatcaacagtatcttcagaggggagga
gccagacatcccggatctaaagaaattcctgaaggtgccgaatattgtcttgcaggatta
agtttcgtgataactggtgttttggattctttggaaagggaggaagctgacgaacttatt
caaaaatatggtggacgaattgtatctcaagtcaccaagaaaactaattatgtcatagta
ggagatcaggctggtccttcaaaattgtcaaaagcaactagttttaatataaaacaaata
tcggaggatgatttgttagagatgattcgtacgagaaatgcaggccatgctcatgatgtg
ttacaatcgcgaacaaaatcaaaagatagaacgaaacgaaaagatagggagtcagaagac
acgtccccttcaccaacaaagaaaatgaaaactatattaaatcaggaaacagaaaaattg
gaaaaaatatgttcaccacataaaaaagaacatattgacaaaaatacagaaaaaagaatt
tcttcatcaaaagaattctcttataaaaaaagatctgataataaagatacgatagaagta
gcaaaaatattgtcatcacctaagaaagaacaaactgaagtacatgaatcttttatacaa
aataaaaaagaaattaatgatgcaaagtgtgtgcaaataaaaacagattctttacaagat
ataaatggaaatatacaaacacaggcgttagttgagaagtatagaccgaaaactatgaaa
cagattttggggcagcaaggagacaaaagcaatgccaagaaattgcataaatggctaatg
aattggcataaaaatcaaagtggtcaagttaaacataccaaaccgagtccctgggcaaaa
agtgacgatggtgctatttttaaagctgctttattatctggtccacctggaattggaaaa
actacaactgctcaagttgtttgtaatgaattaggttttgatcttgtagaattcaatgca
tcagataccagaagtaagaaacttctgcaacaagaagtagcagaacttttatccaatact
tcattgaaagattacttcatagataataaaaataagccaacatcaaaacacgttttacta
atggacgaagttgatggtatggctggtaatgaagatcgtggtggtttacaggaattaatc
gccttaattaaatcaaccgacgtaccaattatttgtatctgcaacgatcgaaataatcct
aagatgagaacgctcgctaattacgtattcgaccttcgattttcgaagcccagaatagaa
cagattaggggagcaatgaaatccatatgttacaaagaaaacattactatgtcgacggaa
gatctagatcgtttaatcgaatccactaatcaagatgttcgacaaataataaattattta
gcattgtttgttgggaaaactggtcgtcaagaaaaatctcaaaaacagcatgtgaacaaa
gatctgaaattaggaccttgggatgttataaagaaagtattttctgccgaggagcataag
catatgaatattcatgacaaaagtgatttatttttccacgattataacatagcaccgtta
tttgtacaggaaaattatttattagttacgcctcaaggacaaagagatgaattattggca
aaggtagcagaaagtgctaaaagtttagcacttggagatatagtggaaaaatcaataaga
agtaatggtgcttggtctcttttgccagtgcaagcctgttattcttccgttatacctggc
acagtaatgtctggttatattagtagtcaaattaattttccatcttggcttgggcgtaac
tcgaaagctcgcaaatttgatagaatgatacaagagattactgtgcactcacgtttagct
actggcgtaagcaaagaagcaataaacatggattacattaaacctcttagggatgctata
gtcagacctttggctgtaaatggtactgaaggaatagatgaagcgatgaatgttataagt
cactatcacttactcagggaagatctggattctttgatagaaacttcattgtggcccggt
gatcgcgatcccatgcaagtcgttgatagtaaagtaaaggctgcttttacaaggacatac
aacaaaaattctgtagttgtaccatatacagtgagtggtacatcaaagaagaaagcagca
aatgaagaggttgaaacttatttagaagagaatgaagcagtggaagcgaattctgacgat
aacgatgataacgctgaaactgacaaaatgattaaggtgaagaagcctacagcaagtaaa
aaaactgaatcaaaacgtaataataacgataaaacagaaatgaaaggtaaaaaaagcgat
aagcccagtaaacgcggaagaggacgtggaaagacaaaataa
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integrated database retrieval system
