Colletes gigas: 122402568
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Entry
122402568 CDS
T07492
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cgig
Colletes gigas
Pathway
cgig04145
Phagosome
cgig04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122402568
09142 Cell motility
04814 Motor proteins
122402568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgig03036
]
122402568
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgig04812
]
122402568
Chromosome and associated proteins [BR:
cgig03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
122402568
Cytoskeleton proteins [BR:
cgig04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122402568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Dynein_IC2
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_RFWD3
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WD40_MABP1-WDR62_2nd
DUF5300
Motif
Other DBs
NCBI-GeneID:
122402568
NCBI-ProteinID:
XP_043261403
LinkDB
All DBs
Position
Unknown
AA seq
712 aa
AA seq
DB search
MMSDRKAELERKKAKLQAIREENERRRREKEQKDIEEATVRAAGTDKDQRKELDAMLSSL
GVAPVSDVVSSLSSMNSLTPEQSANATPDASLQPSSINSAQSAGRRKNRELTVVSVAQTN
IPPKEAVVYNKQTQTIQTTLTSHDELSTSSSAYTIYSCSTTTPTHSYSAGYFETDWWRPR
KDEYNLNPGLEWEDEFTVLTFDDGQAEDEENSLPHMDGFQSKLPPGILPHGLPQVKEVQP
AVTQVEQEKEKEKPKEVQELSEEEKQMIILSEEFQRFLDRTSRIVERALGESVDIYTDYT
GNMDGEDGMDEKSHQRLWLNRSFFCDRWSRNRCVTSMDWSPQFPELLAASYNNNDDTPND
PDGVCLVWNTKFKKTTPEFIFHCQSPVLSITFARFHPNLILGGTYSGQIVLWDNRVQKRT
PIQRTPLSANAHTHPVYCLNVVGAQNAHNLISISTDGKLCSWSLDMLSQPQERLELHVKQ
SKAIAATCLAFPHGDVNNFVVGSEDGTVYSACRHGTKAGVLETYESHQGPVTGVSAHAVQ
GGIDFSHLFLTSSIDWTIKLWSLKENKPLYSFEHNGDYVYDVAWSPTHPALFAAVDDSGR
LDLWNLNQDTEVPTASIMIEGCPALNRVSWTPSGLHVTVGDDTGKIWVYDVAEHLAHPRI
DEWNKFLYTQQELKNNKADEELHKLNLREPVSLSSITPLIQTCPPFKDTFMI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgatagaaaagctgagcttgagaggaaaaaggccaagcttcaagctataagg
gaagaaaatgagagacgtagaagagagaaggaacagaaagatatcgaggaagctacggtc
cgtgctgcaggtacagacaaagaccaacgtaaagaattggatgctatgctttcatcttta
ggagtagctccagtatcagatgtggtatccagcttatctagtatgaattctttaacaccg
gaacagagtgccaatgctactcctgatgctagtttacaaccatccagtataaactctgct
caaagcgctggacgtaggaaaaatcgggaactcacggtcgtctccgtggctcaaactaat
attccgccgaaggaagctgtggtctataataaacaaacacagaccattcagacaacgctc
acatcccacgacgaactgtccacatcatcttctgcatacaccatctactcctgttcaaca
acaacaccaactcactcttactccgcaggctactttgagactgactggtggcgtcccagg
aaagacgagtacaatctaaatcctggtttagaatgggaggacgaatttacagttttgaca
tttgatgatggccaagccgaagatgaagagaacagcttgccgcacatggacggtttccaa
agcaaactccccccgggaattcttcctcacggtttgccgcaagttaaggaagtgcagccc
gccgttacgcaagtggagcaagaaaaggaaaaggaaaagcctaaagaagtacaagaactt
agcgaggaggaaaaacaaatgattatactgtccgaggaatttcaacgattcctcgatcgc
actagtagaatcgtggaaagggcgttaggggaatcagtcgatatttataccgattatact
ggcaacatggacggtgaagatggaatggacgagaagagccatcaacgtctatggttgaat
cgatcgtttttctgcgatcgatggtctcgtaatcgctgtgtcacttcgatggattggtcg
ccgcagttcccagaactgctcgcggcctcttataacaacaacgacgacaccccgaacgac
cctgacggggtttgtttagtttggaacacgaaatttaaaaaaaccacgccagagtttatt
ttccactgtcagtcgccagtattgtcgatcacctttgcgagatttcaccctaatctgatc
ttaggtggcacttattccggacaaatagtcctttgggataacagggtgcagaaacgaact
ccgattcaacgcacgccattgtccgcgaacgcacacactcatcccgtgtattgtttaaac
gttgtcggggctcaaaacgcacacaacttgataagcatttccaccgacgggaaactatgt
tcgtggagtttagacatgttgtcacagccgcaagagagactggagttacacgtcaaacaa
tcgaaagcaatcgctgctacttgtttagcgtttcctcatggcgacgttaataatttcgtg
gtaggcagcgaggatggtactgtttattccgcttgtcgtcacggtacgaaagcaggagta
ttagagacctacgaaagtcaccaaggaccagttactggagttagtgcacacgcggtccaa
ggtggaatagatttctcgcacctgttcctgacatcttccatcgactggacgatcaagctc
tggagtctgaaggagaacaaacccctctattccttcgagcataatggcgattacgtttac
gacgttgcatggtcacccacccacccggcactgttcgctgccgtagacgattcgggaaga
ttagatttatggaatctcaatcaagataccgaagtgcctaccgcgagtattatgatcgaa
ggatgcccagctcttaacagagtctcgtggacaccgagcggtttacatgtaacggttggc
gacgatactggaaagatttgggtctacgacgttgccgagcacttagcacatccaagaatc
gatgagtggaataagtttttatacacgcaacaggagttgaaaaacaacaaagcggacgaa
gaattgcataaacttaatctacgagaacctgtatcgttaagttctataacccctctgata
cagacgtgtcccccctttaaagatacatttatgatataa
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integrated database retrieval system
