Colletes gigas: 122402742
Help
Entry
122402742 CDS
T07492
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122402742
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122402742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
zf-CCCH
zf_CCCH_4
RuvA_C
Motif
Other DBs
NCBI-GeneID:
122402742
NCBI-ProteinID:
XP_043261707
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MTVAGKRYVDCTVLETGSIADAEDSSYDSDYEVEDLIASTNVHSPVELQVSASNHSDVSR
TISDTLAAEFAEYVTVQGSPPIQSPGYTARVEFALKLGYTERLVQTALQKLGPDPEQNEL
LAELIKLGASSSQKSVDTPEESDNVLDTDIVTDLSGCSTSLRPVVIDGSNVAMSHGNKEV
FSCRGIKICVDWFKARGHGEITVFVPKWRKEASKIDNPIADQDILGELEKDRLLVFTPSR
LVGGKRLVCYDDRYILKLAAEIDGIVVSNDNYRDLAQENPEFRKVIEERILMYTFVNDRF
MPPDDPLGRSGPTLENFLRIIPKKTDPAPPCPYAKKCTYGNKCKFRHPERGPHPQKSVTE
KLVEHVQKHLQIRGPNSNPVVPSSVPSKIPQHQPLCKTRSTVTTSAQSLLSVVKSRSVEN
VTIEQPINSGTHGSQVTSTTNTQGHRSSMWTTGRLNKPDAELPNPHRKLQRQLTLNPVCD
PRLCQLRQYQQASQTGSVSKPSAVTTSRVQHRPLTRHSSNESPYRAAMNWDHSEARQCHQ
HVTRIASAPDSYQAWPLNNSNMGTSSGSNQRLGASDPQLNPVASSLYSNMPSDALKEFLD
TRTKIHYHLANIFPEEHVRAAMLIHPFETDPIEICIAILKMYPQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgccggaaagagatacgtggactgtactgttttggaaaccggaagcattgct
gacgcagaggattcatcttatgacagcgattacgaagtcgaggatttgatcgcatccacg
aacgttcattcgccagtggaactgcaggtgtctgcttcaaaccattcagatgtatccaga
actatctcagacaccttagccgcagaatttgcagaatatgtcacagtccaaggaagtcca
cctattcagagtccaggctacacagctagagtagaatttgctctcaaacttggttatacc
gaacgattagttcaaacagcattgcaaaagttgggtccagatccagagcaaaacgagctt
ttagctgaattgataaaactcggtgctagtagttctcaaaaatcagttgacactccagag
gagtctgataatgttctagatactgatatagtgacagatttaagcggatgctccactagt
ctcaggcccgtcgttatcgatggaagcaatgtggcgatgagccatggaaataaagaagta
ttttcttgtagaggaataaaaatttgtgtggattggtttaaagcaagagggcatggagaa
attactgtatttgtaccaaaatggagaaaagaggcttctaaaattgataatccaattgct
gaccaggatattctaggagaattagaaaaggaccggttattggtcttcacaccatctaga
ttagttggtggtaaaagattagtttgttatgatgatcgttatattctaaaattagcagca
gagattgatggtattgttgtcagcaatgataattacagagatttggcccaagagaatcca
gaatttcgaaaagtcatagaagaaaggattttgatgtatactttcgtaaatgatcgtttt
atgccaccagacgatccattaggcagaagcggacctactttggagaattttttacggatt
attccaaaaaaaaccgatccagccccaccttgtccatatgcaaaaaaatgtacttatggg
aataaatgtaaatttcgacatccagaaagaggtcctcatcctcaaaaatcggttacagag
aaactagtagaacatgtacaaaagcatcttcaaattagaggtccaaattcaaaccctgtt
gtaccaagtagtgtaccttccaaaatacctcagcatcaaccattgtgtaaaactagatca
accgtaaccactagtgctcaatcgttgctttcggttgttaaaagtagatctgtagaaaat
gttacaattgagcaaccaataaactctggtacacatggatctcaagtaacctcaaccaca
aatactcagggtcaccgctcttccatgtggacaacaggaaggttaaataaaccagatgca
gaattaccaaatccacatagaaaacttcagaggcagttaacattgaatccagtatgtgat
cctcgactttgtcaattacgacagtatcagcaagcatcacaaacgggttcagtatcaaaa
ccgtctgcagtcacaacttctagagtgcaacacaggcctttaactagacattccagtaac
gaatcaccttacagagctgccatgaattgggatcattctgaagcacgacaatgtcaccag
catgtaactcgtattgcttcggcgccagattcgtatcaagcttggccactaaacaattcg
aacatgggtacatcatcaggatcaaatcaacgattgggtgcctcagatccacaattaaat
cctgtcgcatcttcgttatactcaaatatgccttcagatgcactgaaagaatttctggac
actagaacaaagatacattatcatttggcaaatatttttcctgaagaacatgtgagggct
gctatgttaattcatccatttgaaacagatccaatagagatctgcattgctattctaaag
atgtatcctcaataa
DBGET
integrated database retrieval system