Colletes gigas: 122403110
Help
Entry
122403110 CDS
T07492
Name
(RefSeq) uncharacterized protein LOC122403110 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cgig
Colletes gigas
Pathway
cgig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122403110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgig04990
]
122403110
Domain-containing proteins not elsewhere classified [BR:
cgig04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
122403110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122403110
NCBI-ProteinID:
XP_043262382
LinkDB
All DBs
Position
Unknown
AA seq
1909 aa
AA seq
DB search
MAQLISVKLSRFDGSPWGFRLQGGKDFGTPLVVQKVNSGSPAEAAGLKAGDAVIRVNNTD
MYNLRHKDAQDVIVRAGNNFELTIQRGGGTWKPHVSPLNSTLPSPSPTATIGNIAPVTKT
SLAAKKQDGSHIGSGHNFSPKPFPNGTSDGSIKSIVNKQYNSPVGIYSEETIAETLSAQA
EVLAGGVLGVNFKKNEKNYNAENSEVFKMVQEADKEPKTPEPVPSRTEFYSSVSHAVGGR
ATSPRSPTPLFHALHGVGPAFNSNECSSKRLPQRQESSSPSWGPSTVVCSNCDRAIVGVF
ARIKDKNLHVECFKCSTCGTSLKNVGYYNINNKLYCDIHAKLVARQNAPAGLVPITVPPG
GKAPANTISAALANAPLSPPLSNHASSPLPFSACNRTSPDYGSPNLQLSTLNRNGCITNG
ECHWESKTFTSSITIQTGCTEPTRLGTSPVDPPSFRSVQAPTSNNLIGPKPFGGSSNLSS
NLSSPPLVNSGNNALPRPQSQTVTENTTETHEKSYYYELVEETKTESRPSSVKSKSLNWP
PQKPIEDVTYPTASPLYIDPNPALDRCNKQAVKEKKACIEACERALTRKRCESADLEVER
VTGQYYRFDEDPMDRVSCPGPVYRKVELVECGRQSRSEITSRPSSTDSVKRSLTPTRIAQ
PVPKPWTATVSTGNSLYEQSYGGTEPPKVCKKFHSKEICQRERICERNQPFREEHRSYQS
TVCRREQTICDKPPLPVQHTVKQEETREEVTEIDKEVTDLRPADEIDDEDGKGIGGEHDF
VTETTEEDVDGMHVKKKMTFEKTVEKLPSPARPSTPMVTEETTEECYTRTSSKHIDREVQ
ETEEKTVVESAEVVTSAVDVQQMLEQAKRDEEEQKREQEAEEKRKQEEEERKRREEEEQR
RRRAEEEQRRREEEEENSRRETFEEEVVEEVREQPLGRTVVREERMTEEEGDTPGSKKLI
KETYEEITEEVLVQERVRKLDIEDERRKSLREQVEVHQSLREQQAPKERRVCSKYPPAQE
IMETNKKHVQFVKQTDSGPKPIPHSAIQNSTPKEWKSEMVNALTTAPDRPFTPGGTTTST
SVKEVYTEETIYLDHRCRPKPPPQDIRPISPFQQALMIAPERPYTPLSREIGPEDQKIAS
RSGTPAIQGERICPPADILFGEVKRPPPSPKPCGPRPLPTPPPDYRLRDRSASPSRSRPQ
TPSSKCITASLKKPDTIPSYQKNLVAMRRGAVESHTYQPGSRTPTPTPGRSKSPAQGPPE
PPCCYVKAHAPRIRDDPPPRRSGVHFPTKKSVSYKVDEDTDDGHRHAEYAATKTVDFDEK
QTDDPGRGPTDAVHAQYQEKRLMTSEETQQRKQTVCKKSLEVVEDFERCERRVPTRPLPE
PRERPRTQEHKSVCAITKTSPSKPTLSCPMTDSAPQPVYSSSTEVRHVSYGTSTPAKTCP
DTGVTVMPCKAVSDQGTKAGVVVVPCEGPNTCCQKSGVCVMPTPDRSGVCVSPCFGAKTT
GVCGQPSGRCGRESACDLDVPNCPMSGICVSPCDDGSVCVAPCNKPGQKGLPFPQIPFPF
NDPSPPAPAPAPQNRSSFEPIHKPRTNLSGQLARLTAKTGHSNTPTVQLYKPQAQSQTQS
CCESSSYCCKTQSYCSSKTRCQSGGQCSINTRCQSGNRCETQNNCQDGIHCSPSRNTQSL
VDPPNLSSHPDLGTGVGGLGGAGSKSGTFAGSSAPKRGRGVLNQAGGPGSRLPLCAHCNS
YVRGPFITALGQIWCPDHFVCVNTQCRRPLQDIGFVEEKGQLYCEYCFERFIAPCCNKCN
NKIKGDCLNAIGKHFHPECFKCTYCGKLFGNSPFFLEEGLPYCEADWNELFTTKCFACGF
PVEAGDRWVEALNNNYHSQCFNCTMCKKNLEGQSFYAKGGRPFCKNHAR
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgatcagcgtcaagctctccaggttcgacggatccccgtggggcttccgt
cttcagggtggcaaggactttggcacacccctcgtcgtgcagaaggttaatagcggctca
ccggcggaagcagctggcctgaaggccggcgatgcagttatcagggtgaacaacaccgac
atgtacaacctgaggcacaaagacgcgcaggatgtcatcgtcagggctggaaacaatttc
gagctgaccatacagagaggcggcggtacctggaagccacacgtgtctccgttgaattcg
accctcccgtcgccgtcgcccaccgccacgatcggtaacattgctccagttacgaagaca
tccttggcagccaagaaacaagacggatcgcacatcggaagcggccacaacttcagtcca
aagccattcccgaacgggaccagcgacggttcgatcaagtccatcgtgaacaaacagtac
aacagccctgtgggcatctacagcgaggagaccatcgcggagaccctttccgcgcaggcg
gaagtcctggccggaggtgtactcggggtgaacttcaaaaagaacgagaagaactacaac
gccgagaacagcgaggtgttcaagatggtccaggaagcggacaaagaaccaaagacaccg
gagcctgttccttcgagaacagagttttactcgtcggtgagccacgccgttggcgggagg
gccacctcgccgagatcacccacgcctctatttcatgctctccacggcgttggtccggcc
ttcaattccaatgaatgctcgtcgaaacgtctgccgcaacgacaggagtcctcgtctccc
tcttggggcccgtctaccgtcgtttgtagcaactgcgaccgagcgatcgtgggtgtcttc
gccaggatcaaggacaagaatcttcacgtggagtgcttcaaatgctctacatgcggcacc
tccctcaagaacgtcggctattacaatatcaacaacaaactatactgcgacattcacgcg
aaattggtcgccaggcaaaacgcaccagctggccttgttccaatcaccgtgccaccaggc
ggaaaggcaccggctaataccatttccgctgcactcgcgaatgcaccgttgtctccaccc
ctgagcaatcacgcatcgtcgcctctaccgttctctgcttgcaatcgtacgagtcccgat
tacggatccccgaatcttcagctgtcgacgttgaataggaacggatgcatcacgaacggc
gagtgccactgggaatcgaaaaccttcacgagctcgatcaccatacagacgggttgcaca
gagcccacccgccttggcacatcgcccgtcgatccacccagtttccgatcagtccaggcg
ccaacgtccaacaatctaattggtcccaagccttttggaggatcgagcaatctgtcatcg
aacctgtcgtcgcctccactggtgaactcagggaacaacgctctaccgcgaccccagagt
caaactgtgactgaaaacacgacggaaacccacgaaaagtcctattattacgagctggtc
gaggagaccaagacagagtcccgaccgagttccgtgaaatcgaagagcctgaattggcca
ccgcaaaaaccgatcgaggacgtcacgtacccgaccgctagtcccttgtacatcgacccg
aatcccgccctcgacaggtgcaacaagcaggcggtcaaagagaagaaggcctgcatcgag
gcctgcgagagggcgttgacgagaaagaggtgcgagagcgccgatctcgaggtagaaaga
gtcaccgggcagtattatcggttcgacgaggacccgatggaccgcgtcagttgtccgggt
cccgtgtacagaaaggtcgagctggtggagtgcggcagacagtcgaggagcgagatcacc
tcgaggcccagctccaccgacagcgtgaagaggtcgctgacgcccaccaggatcgcccag
cctgtaccgaaaccatggacggccaccgtctcgacgggcaacagcctctacgagcagagc
tacgggggcacggagccgcctaaggtctgcaagaagttccactcgaaggagatctgtcag
cgggaacggatatgcgagaggaaccaaccgttccgggaggagcatcgctcgtaccagtcg
acggtctgtcgacgggagcaaacgatttgcgacaagcctcctctgcctgttcagcacacg
gtcaaacaggaagagacgagggaagaggtgacggagatcgacaaagaggtgaccgacttg
agaccggcggacgagatcgacgacgaagatggtaaagggatcggaggggagcacgatttc
gtcacggagaccacggaggaggacgtggacgggatgcacgtgaagaagaagatgacgttc
gagaagaccgtggagaagcttccgtcaccggcgcgacctagcacgcccatggtcacggag
gagaccaccgaggagtgttacaccaggacgtcgtcgaaacacatcgacagagaggttcag
gaaacggaggagaagaccgtggtggagtccgcggaggtggttacgtcggcggtggacgtt
cagcagatgctggagcaggccaagcgggacgaggaggaacagaaacgcgagcaagaagcg
gaagagaagaggaagcaagaggaggaagagaggaagagacgcgaggaagaggagcagagg
agaagacgagcggaggaggagcaaagacgacgggaagaggaggaagagaacagcagacgc
gagaccttcgaggaggaggtggtcgaggaggttcgggagcaaccgctgggaagaacggtg
gtccgcgaggaaaggatgacggaagaggagggcgacacgcccggcagcaagaagctcatc
aaagagacctacgaggagatcacggaggaagtgttggtccaggaacgcgtgaggaagctg
gacatcgaggacgagcgtagaaagagcctgcgtgagcaggtggaggtccatcagagcctc
agggaacagcaggcgcccaaggagcgacgcgtctgctccaagtatccaccggcccaagag
atcatggagaccaacaagaaacacgtgcagttcgtcaagcagacggacagcggaccgaaa
ccgataccccactcggcgattcagaactccacccccaaggagtggaagtcggagatggtg
aatgctctgacgaccgcgccggaccgaccattcaccccaggcggcaccaccacgtcgacc
agcgtcaaggaggtctacacggaggagactatatacttggaccacagatgtcgaccgaaa
ccgcccccgcaggacattcgtccgatctcgccgttccagcaggccctgatgatcgcccct
gagcgtccctacacgccgctcagccgcgagatcggccccgaggaccagaagatcgccagt
cgttccggtaccccggcgatccaaggggagaggatatgtccaccggccgacatactcttc
ggagaagtgaaacggccgccaccctcgcctaaaccgtgcgggcctcggcctctgccgacc
ccgccgcccgattatcgactcagagaccgctccgcctcgccctcgcgatccagaccccaa
acgccaagcagcaaatgcatcacggccagcctaaagaagcccgacaccatcccgtcgtac
cagaagaacctggtggccatgagaagaggcgccgtcgagagtcacacgtaccaacctggt
agcaggaccccaacacccacaccaggaagatccaaatcgcccgcccaaggaccgccagag
cctccctgctgttacgtgaaggcccacgcgcccaggatccgcgacgatccaccacccaga
cgcagcggcgtccacttccccaccaagaagagcgtctcgtacaaggtggacgaggacacc
gacgacggacaccgacacgccgagtacgccgccaccaagactgtggacttcgacgagaag
cagaccgacgatccgggccgcgggcccacggacgccgttcacgcccagtatcaggagaaa
cggttgatgaccagcgaggagacgcaacagaggaagcagaccgtgtgcaagaagtcgctc
gaggtggtcgaggacttcgagaggtgcgagagaagggtgccgacgagaccactgccggaa
ccgcgcgagagacccaggacccaggaacacaagagcgtgtgcgcgatcaccaagaccagc
ccctcgaaaccgacgctctcctgtcccatgactgactcagccccacaaccggtctacagc
agctccacggaggtgcgtcacgtcagctacggaacgtccacccccgccaagacctgccca
gacaccggcgtgacggtgatgccctgcaaggcagtctccgaccagggcaccaaagctggc
gtggtcgtggtgccctgcgagggaccgaacacctgctgccagaaatcaggcgtttgcgtg
atgcccacccccgatcggtccggtgtctgcgtctcaccatgtttcggcgccaagacgacg
ggcgtctgcggtcaaccgtcgggacgctgtggtcgcgagtccgcctgcgacctagacgta
cccaactgcccgatgtccgggatctgcgtgtcgccgtgcgacgatggttccgtctgcgtg
gcaccgtgcaacaaaccgggccaaaagggacttcccttccctcaaatccctttccccttc
aacgatccgtctccccctgctcctgcgcccgcccctcagaacagaagctccttcgagccc
atccacaagcctcgcactaacctgagtgggcagctcgcgcgactgaccgccaaaacaggc
cacagcaacacccccaccgttcaattgtacaaaccccaggctcaaagtcagacgcagagc
tgctgcgagtccagtagctactgctgcaagacccaaagttactgttcctccaaaacccgc
tgccagtcgggcggtcaatgttcgatcaacacccgctgtcaatccgggaatcgatgtgag
acccagaataactgccaggacggtatccactgttccccctctagaaatacccagagttta
gtagacccaccaaatttgtcatcccacccggatctaggtaccggagtcggtggcctcggt
ggtgccggttccaagagcggaacattcgctggcagcagcgcgccgaaacgcggacggggc
gtcctcaatcaagctggtggaccgggatcgcgattgcccctctgcgctcattgcaactct
tacgtcagggggccgtttatcaccgccctggggcaaatttggtgccctgaccacttcgtt
tgcgtcaacacccaatgtcgtcgaccgctacaggacattggattcgtggaagagaaagga
cagctgtattgcgagtactgtttcgaacgtttcatcgcgccatgctgcaacaaatgcaac
aacaagatcaaaggagattgtttgaacgcaattggaaagcatttccaccctgaatgcttc
aaatgtacatattgcggcaagctctttggaaacagtcctttcttcctcgaagagggattg
ccctactgtgaagctgattggaacgagctgttcacgaccaagtgtttcgcgtgcggattc
ccagtcgaagctggagatcgttgggtagaggccctgaacaataattaccacagtcaatgt
ttcaactgcacgatgtgcaagaagaacctcgagggtcagagtttctacgcgaaaggagga
cgtccgttctgcaaaaatcatgcgcgttaa
DBGET
integrated database retrieval system
