Colletes gigas: 122403331
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Entry
122403331 CDS
T07492
Name
(RefSeq) WD repeat-containing protein 43 isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
cgig
Colletes gigas
Pathway
cgig03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122403331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgig03009
]
122403331
Ribosome biogenesis [BR:
cgig03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122403331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_IFT122_1st
Utp12
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
WDR55
Beta-prop_EML_2
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_Vps41
Beta-prop_WDR19_1st
ASA1
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WDR54
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
WD40_like
Motif
Other DBs
NCBI-GeneID:
122403331
NCBI-ProteinID:
XP_043262746
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MASTVSCYAFSSDGDYFAHCGNDGKLKIWDTFTSRLKQEYVSNFHLSSPCCILAWLYVNT
SSTNATFPSPWKKRKKKSISEESNSKGIVAMGSTNGKITLYDTTSSVTTQLDGHSGTVTA
VTWSENVGLFTAADDHHIIHWNLKENGIKYKWKSGRGKTTSLALSKDGDSLLSGERIIKW
WDLSTRQLVRTFTGHANQITCLCTLKMPSGSNYVISGACGDGCLNVWALDENKNDRSPAT
SLALQDDATSVSVNVSEESEVVVLAVTRSGQAHLFQYQPNGRTKPLKPSLNIAVASDVSP
KDTVQQIPILDAKLTREQTLLLTYGTYLNPTFERVTPDFSDKVQCLVRSENRRNKDRKDE
ISKVKTPLIEDNVEYLAPGIIGTTTKRDRNSSSGSQLLLKDRLENLSLNGESSPAGKTTT
SGSNRAQLLIQGLNSKDKTILTNIFLTRNESIIRNSIAKLPIQAIGPLLKELTILLQGKT
YASKVAVRWLEALLMTHAGHFLSQADLMQSFGAILSLIDAKLALLSELSKLKGRISLVTG
QISQTTEEHHKDVDENCLVYQDSDSSDEDGGIEDEDIESESDENWEEMSNQEDQDDQEEQ
NDQDVRSTNSDNEDESISS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaccgttagttgttacgctttttcctccgacggtgattatttcgcgcattgt
ggaaacgatggaaaattaaaaatttgggataccttcaccagccgtttaaagcaagaatat
gtttcaaattttcatctgtcctctccatgttgcattttggcctggctttatgtcaacact
tcgtcaacaaatgctacgtttccttcaccatggaaaaaacgcaaaaagaagtcaatttca
gaggaatccaattccaaagggattgttgcaatgggttctacaaacgggaaaatcacgctt
tatgacacaacatcttcagtcactactcagctggatggtcattccggtacagttaccgcg
gtgacgtggtctgaaaatgttggtctattcactgcagcggatgatcaccacattattcat
tggaaccttaaagaaaatggaataaaatacaaatggaaatccgggagaggaaaaacaacg
tctttggccctctctaaggatggggatagtttactgtccggggagagaattattaagtgg
tgggatctatctacgagacaattagtcagaacattcacgggccatgctaatcaaataaca
tgcctttgtactcttaagatgccatctggaagcaattatgtaattagtggagcttgtggc
gatggctgccttaatgtttgggctttagacgaaaataaaaacgatagatcccccgcgaca
agcttagctttacaggacgacgcaacaagcgtttctgtaaatgtctctgaggagtcggag
gtagttgttctggcagtgactagatcaggacaagcacacttatttcagtatcaaccaaac
ggtcgcacaaaaccgttgaagcctagcttaaatattgcagtagcttccgacgttagtccg
aaagacactgtccaacaaattcctatcttagatgcaaaactaacaagagagcaaacgttg
ctcttaacgtacggtacatatctgaatcctacattcgaaagagtgactccagatttctct
gataaagtgcaatgcctggtgcgttcagagaataggagaaacaaagacagaaaagatgaa
atttctaaggtgaagactcccttaattgaggataatgttgagtaccttgcaccgggaata
attggaaccacaacaaaacgggataggaatagcagttcaggatcacaattattattgaaa
gacagattggaaaacctcagcttaaatggtgaaagcagccctgctggaaaaactactacc
tcaggtagcaatagagcacaacttttaattcaaggcttgaatagtaaagacaagactatt
ctgaccaatatttttctcacaagaaacgagtccattattaggaactctattgctaaacta
ccaatacaggcgattggaccattactcaaagagctaaccatcttgctccagggtaaaact
tacgcgagcaaagttgcggtgagatggttggaggcattattgatgacacatgcgggtcat
tttttgtcacaagccgatcttatgcaatcgtttggtgcaattttgagtttaatagatgcc
aaattggctctcttgtcggagctctcgaaacttaaaggccgcatatctctcgttactggc
caaatttctcagacaaccgaagagcaccacaaggacgttgatgaaaactgtcttgtctat
caggattcagattcctctgacgaagatggcgggatagaagatgaagatatagaaagcgaa
tctgatgaaaattgggaagaaatgtctaatcaggaagaccaagatgatcaagaggaacag
aatgaccaagatgttagaagtacgaattccgataacgaagatgaatctatatccagttaa
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