Colletes gigas: 122403666
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Entry
122403666 CDS
T07492
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cgig
Colletes gigas
Pathway
cgig04140
Autophagy - animal
cgig04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122403666
04148 Efferocytosis
122403666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgig04131
]
122403666
Membrane trafficking [BR:
cgig04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
122403666
Hops complex
122403666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
Clathrin
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-C3HC4
zf-RING_5
zf-RING-like
zf-ANAPC11
Pellino_RING
zf_RING_Vps8_fungal
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122403666
NCBI-ProteinID:
XP_043263240
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MAFLEWRRINFFDLKKEVDGGKIAEALKEAQVTAATSGNSNIVFGDDNGMVHLVNRTYDV
TSFHAYEITLTLAQLIQHSNYLFTIGEDEKGCNPTIKVWNLTKLDKHDNPTCIRISRAIP
GYRAVPATALYVHSNLTLMAVGFGDGSIMLYRGDLTRERKNKIKVLKDTNISITGLGIRS
TGKQNHLFVATHSSVFLYNITTMDKEIKFPLDVVGCARKCSILTESMQDSHFMIGHNKAI
YCYTPDGNGPCYPVGGQKVMLEWFRNYIVIVAKEAVNVPRTTTTISAKPSPIEPIPPGVD
KHMITVIDIQNKFIAFSSSMVSVQAVVSEWGGFFILSGDKKLYHLDEKDLQSKLALLFKK
NLYDASIRIAKNQQYDAEGLIDIFRQYGDHLYLKGDHNGAIEQYIKTIGKLEPSYVIRKF
LDSQHIDHLTTYLQALHKNGHATGDHTTLLLNCYTKLNHTDKLKEFIMTKDREVDFDVEI
AIKVCRQASPEDALLLAQKHARHEWYLRIQIEDKHEYEKALEYIATLEFEEAESNMKKYG
SVLIENVPNESTQFLKSLCTNYRPSNKPLVDQETLDGTTSQHVDKANPEDFIHLFLNNSE
RLVEFLEHLVKLDAKWSTLVYNTLVEHYLHVWSALDTDVAKVQFEQKIVRLLQNSEACYD
KDQILILCHQHNFRRGLLFLYEESKLYVEVARVINKTVFRNVVLRIVFVGRYQEILQFHL
READSEQILATCKRFGHQDPNLWVQALWSVARNKNASLKLLADILENIEQERLLPPLMVI
DAISTSLSCTFGDVRTYLNNVLRTNHEQTQADIDLIEKYRTDTLKIREQIESIKNNTIIF
QGSRCSACHRQLELPSVNFMCQHSYHQHCFQSYSENENECPVCLPNNKKYLDVIKSQEQS
KDLHEIFHRLLDRADDPFSLVAEYFGRGVFKKLTVITDTDKPLSTSSTKFEEPKLNYGPG
AEAKIRLTEGKNSTLGNTDVRRPQDNYSVAANDRLRSFPRSDVHSSSSEANTSGVVPTSR
GNSTKVSSVPIKEARILNSTTPKSSPIQKSFVPPTSPIVPFKPSKTNEYDESKNPFFGDD
DVNAIDNDEYDDDDDDYYNKNLNPFTR
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcattcctcgagtggagacgcatcaatttcttcgaccttaaaaaagaggttgacggt
ggaaagatagccgaagctctcaaagaggctcaagttacggcagctacaagcggtaacagc
aacatagttttcggagacgacaacggcatggtgcatttagtgaacaggacttacgatgtt
accagttttcatgcgtacgagatcacgttaacattagcccaactgattcaacattccaat
tacttgtttactattggcgaagatgagaaaggttgtaatcctacgataaaagtctggaac
ttaaccaaactagacaaacacgacaatccgacgtgcattcgtataagtagagccatacct
ggctacagagcagttccggcgactgctttgtacgttcacagtaatctcactttaatggcc
gtgggttttggggatggctccattatgctttatagaggcgacttgaccagggaaagaaag
aacaaaataaaggtgttgaaagacaccaatatctccatcactggcttagggataagatct
acaggcaaacagaatcatttgttcgttgctacgcatagcagtgtctttttatataatatc
actaccatggacaaagaaattaaattccctttggacgttgtgggctgcgctagaaaatgt
agcattctcacggagtctatgcaggatagtcacttcatgatcggtcacaacaaagcgatc
tattgttatacaccggatggcaatggaccttgttatccggtggggggccaaaaagtaatg
ttggaatggttcagaaattatatagtaatcgtagcgaaggaagcagtcaacgttccaaga
acaacgactaccatttctgcgaaaccaagccctatagaaccgataccgccaggagtggat
aaacatatgatcacagtgatcgatatacagaataagttcattgctttctcttcatcgatg
gtgtccgtgcaagcagtggtatcagaatggggcgggtttttcatactcagcggtgataaa
aagctttaccacttggatgagaaggatttacagtcgaaattggcattactttttaaaaag
aacttatacgatgcgtctataagaatagctaaaaatcaacaatacgatgccgaaggtctc
atcgatatattccgacaatacggggaccatttgtatttgaaaggagatcataatggcgcc
atagagcaatacattaaaactataggcaaactggagccctcgtacgtgatcagaaaattt
ttagactcccaacacatcgatcatttaacaacttatttgcaagctttgcataaaaatgga
cacgcgacgggagatcataccactttgttgttgaactgttacacgaaattgaatcatact
gataaattgaaagagttcatcatgacgaaagacagagaggtcgattttgacgtagaaatt
gcgataaaagtctgtcgtcaagcgtcgccggaagatgcgctgcttcttgcgcagaagcat
gcgcgacacgaatggtatcttcgtattcaaattgaagacaaacacgagtacgagaaagca
ttggagtacatagcaactttggagttcgaggaagcagagtccaatatgaagaaatatggc
agcgttctcatagaaaatgtgccaaacgagtctacgcagtttttaaaaagtttgtgtacc
aattacaggccttccaacaaaccgcttgtggatcaggaaactttagatggcactaccagc
caacacgttgacaaagctaaccccgaagacttcattcacctgtttttaaataattctgaa
cgactggttgaattcttggaacatttagtaaaacttgacgccaagtggagtactttggtg
tacaatacgttagtggaacattacctacacgtgtggtcagccttggacaccgatgttgcc
aaagtgcagttcgaacagaaaattgttcgacttctgcaaaactcagaagcgtgttacgac
aaggatcaaatattaattctgtgccatcagcataacttcagacgcggtctgctctttctt
tacgaagaaagcaaactgtacgttgaagtagctcgtgtgataaataagaccgtatttaga
aatgttgtcttacggattgtgtttgtcggtagatatcaggaaatattgcagtttcattta
cgagaagcggacagcgaacaaattttagctacttgcaaacggtttggccatcaggatcca
aatttgtgggttcaagctttgtggagcgtcgctaggaacaaaaatgcttcgctcaagctc
ctcgcagacatactggaaaatatagaacaagagagacttttgccgccattgatggtgatc
gatgcaatttcaacttcgctatcctgcaccttcggcgatgttagaacttatttaaacaat
gtgttacgaacaaatcacgaacagacgcaggcagatatcgatttaatcgaaaagtatcgt
acggatactttaaaaatacgcgaacaaatagagtcgataaaaaataacacgataattttc
caaggatcgcgttgcagcgcgtgtcatcgtcaattggaactaccatcggtgaatttcatg
tgccagcattcgtatcaccaacattgctttcaaagttactccgagaacgagaacgagtgc
ccagtttgtttaccaaacaataaaaagtacctagacgtaataaaatcacaggaacaatcg
aaggatcttcacgaaatatttcacaggctgcttgatcgcgcggatgatccattttcattg
gtcgccgaatactttggccgaggagttttcaaaaaattaacggtgatcaccgatacggac
aaaccgttatctacttcgtccacgaaatttgaagaaccaaagttgaattacgggccagga
gcagaagccaaaattaggttaacggaggggaagaattcaacattaggaaacaccgatgtt
cgtcgacctcaagacaactactccgtagcagcgaacgatcgtttacgatcatttccaagg
tcagacgttcattcttcgtcgtcggaagcaaatacctctggcgtggtacctacttcccga
gggaattcaacgaaagtttcctcggtgcccataaaggaagcccggattttaaatagcacg
acaccgaaatcatcgccgattcagaagtctttcgtgccgccaacatcgccgatcgtaccg
tttaaaccgtccaaaacgaacgagtacgacgaatcaaaaaatcctttcttcggagatgac
gacgttaatgccattgacaatgacgagtacgacgacgatgacgacgattactacaacaaa
aacctaaatcctttcactagataa
DBGET
integrated database retrieval system
