Colletes gigas: 122403714
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Entry
122403714 CDS
T07492
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgig03009
]
122403714
Enzymes [BR:
cgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122403714
Ribosome biogenesis [BR:
cgig03009
]
Eukaryotic type
90S particles
Helicases
122403714
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
WHD_HA2
ResIII
Flavi_DEAD
ATPase
nSTAND_NTPase5
NAT10_TcmA_helicase
PhoH
AAA_30
AAA_16
SIP
Motif
Other DBs
NCBI-GeneID:
122403714
NCBI-ProteinID:
XP_043263355
LinkDB
All DBs
Position
Unknown
AA seq
1196 aa
AA seq
DB search
MGKKRYNLKSRNVVEVEIDNSGTKKIALDIKHHADDYDNCNPLVLPSKKRKTKSKVQKVT
VTRLLSKKRRKELEKVVEKKQKKLHRATLLEELAKVQAPQHELKQYVSLTAVQTKGLKRH
FREAELPTKEYNDKIVNDNENDGTEVVINAIKGRKKRLAILADSRKNDVCSDPNIVGFEE
SSHSESELNVKDDESEQEENASENESHRQTENVEENTKEHSCEKEEESSNNNIVTENNVQ
EKEKPPVATLNKDSSKLQEAANKKPAVFVALQRKPEIQAARLKLPVVAEEQVIVEAINEN
PVVIITGETGSGKTTQVPQFLYEAGYAREKLIGVTEPRRVAAMSMSKRVAEEMNLTEKEV
SYLIRFEGNVTSETKIKFMTDGVLLKEIQSDFLLTKYSIIILDEAHERSVYTDILIGLLS
RIVPLRNKKNNPLKLVIMSATLRVEEFVENKKLFKVKPPVLTVKSRQFPVTIHFNRKTNT
NYVADALRKAVKIHTRLPDGGILIFLTGQREVNFVVRKLRKAFPMKSKKETRKKPQKSQV
NADVEEKKKEETTDKSDNDDSEDDFRSENAIRCNKLRKKKEIQLPNINLDDYSVIPADDT
HEDLVEADDDEELQLDEDEDEDDDVIDLKDCANAQSLFVLPLYSLLPSYKQARVFESPPE
DCRLCVVATNVAETSLTIPNIKYVIDSGRCKTRMYDKVTGVSTYKVCYTSKASANQRAGR
AGRTGPGHTYRLYSSAVFNDQFEQFSQSEIQRKPVDDLVLQMKVMNIDKVVNFPFPTPPD
IVQLQMAEKRLLILGALHQPPPGKEGSYSAKITPLGHSIAAFPVAPRFGKMLALSHQHNL
LQYTICMVAALSVQEVLVEAYESDGAFKSKWSQMRRHWAGTCNSLLLGDPMVLMRAVGAA
EYAGTKGKLLSFCENHGLRHKAIVEIRKLRQQLTNEINLNVQDLNLTIDPQMEPPNDTEA
KLLRQIVLAGMADQIAKKVMPDEIGEDQDKNKWKYAYKTLDMEDPVFMHSSCVLRKSCPE
WVVYQEVYETNKMYMRGVTVIEPEWLPKFTPSLCQLGEPLTDPPPRYDEETGKVMCSITG
TVGRGGWKLPTINMEHPLTVEGVKWFACFFLEGKVCPKLKRFVPSLLSTPQSINKSWAKL
IPRTQEMTRLLMSRAIMSKEKLLETWRADESFLLSAYQKWLPESAHGQVTIIWPPV
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaaagatacaatttgaaatcgagaaatgttgtggaagttgaaattgacaac
tctggaactaaaaagatcgctttggacatcaaacatcatgcagatgattatgacaactgt
aaccccttggttcttcctagcaaaaagaggaaaacaaagagcaaagttcagaaagtaact
gtaactcgattgttatcgaaaaaacgtagaaaggagttggaaaaagttgtggaaaagaaa
caaaagaagttgcatagggctacacttttggaagaattggcaaaagtacaagcacctcaa
catgagttgaaacagtacgtatctttaacagctgtgcaaaccaaagggttgaaacgtcat
tttagagaagcagaattacctacgaaggaatacaatgacaaaattgtcaatgacaatgaa
aatgatggcacagaagtagttataaatgctattaaaggaaggaaaaagagactagccatt
ttagcagatagcagaaagaatgatgtttgctctgatccaaacattgttggatttgaagaa
tcaagtcacagcgagtctgaattgaacgtcaaggatgatgaatctgagcaggaagagaat
gcttcagagaatgaaagtcatcgtcagactgaaaacgttgaagaaaacacgaaggaacat
tcttgcgagaaagaagaagagtcttcgaataataatatcgtaacagagaataatgttcaa
gagaaagaaaagccgcctgttgctactctgaacaaggactcttcaaagttgcaagaggcg
gcaaataaaaaacctgctgtctttgtagctctgcagaggaagccagagatacaagcagct
aggttaaagttacctgttgtagcggaggaacaagttatcgtagaggcgatcaatgagaat
cctgtcgtgataatcactggtgaaacgggaagtggtaagactacccaggtgccacaattt
ctgtacgaagctggctatgctcgagagaaattaattggcgtaacggaacctaggagagtg
gctgctatgtcgatgagcaaacgcgtagccgaggagatgaatctcacggaaaaagaggtt
tcctatttgattcgttttgaggggaacgtaacgtccgagacaaaaatcaaattcatgacc
gacggtgttctgttgaaagagatacagagtgactttttgctcactaaatactcgataata
attctggacgaggcccacgaacgaagcgtatacacggatattttaatcggtttgttatcg
cggatagtaccactgcgtaacaagaagaacaatcctctgaaacttgtaattatgtcggct
accttgagggtggaagaatttgtagagaacaaaaaattgtttaaagtgaaaccgccggta
ctaacagtgaaatcgaggcagtttccggttacgatacatttcaatcggaaaacaaacacc
aactatgttgctgatgccttgcgaaaagcagtaaagattcacactcgcctcccggatggt
ggtatcttaatatttctaacagggcaaagggaagtgaattttgtggtacgaaaattacgc
aaagcgtttcccatgaagagcaaaaaagagactcgtaagaagccacagaaatcacaagta
aacgcggacgtcgaggagaaaaaaaaagaagaaactaccgataagagtgataacgatgac
tccgaggatgattttcgttccgagaacgcaatacgttgcaacaaactgcgaaagaagaaa
gaaattcaattgccaaacattaatctagacgactactctgtgattcctgccgacgacacg
cacgaggatttggttgaagcggatgacgacgaagaactacaattagacgaagacgaagat
gaggacgatgatgtgattgacttaaaggattgcgcgaatgcacaatcattgtttgtttta
ccgctgtattccctattgccaagttacaaacaagcgagggtgttcgaatcaccgccagag
gattgtcggttatgcgtcgtagctacaaatgtagccgaaacttctctaacaatacccaat
ataaagtacgtgatagacagcggacgatgtaaaacaagaatgtacgataaagtaacaggc
gtcagtacgtacaaagtctgttacactagcaaagcatccgctaatcagcgtgcaggcaga
gctggcagaactggtcctggccacacctacagattgtactcgtcggcagtattcaatgac
caatttgaacagttcagtcagtcggagatacagaggaaacccgtggacgatttggtcctg
caaatgaaagtaatgaacattgataaagttgtgaatttcccattcccaacgccaccggac
attgtacaattgcaaatggcggaaaaacgactgttaattcttggtgctttgcatcagccc
ccgcccggcaaagaaggttcatacagtgccaaaatcacgccacttggtcacagtattgct
gcgtttccggttgctcctcgtttcggaaagatgttggctctttctcatcagcataatctc
ttgcaatacactatctgcatggttgcagcactttccgttcaggaagtgctggtggaagca
tacgagtcggatggagctttcaaaagcaaatggtcacaaatgagacggcactgggccgga
acttgcaacagtttacttctcggtgatccaatggtcttgatgagagctgtgggagccgca
gaatatgcagggactaaggggaagcttctctcgttctgcgaaaatcatggtttacggcat
aaagctatcgtagaaattaggaaactgcgacaacagctgacgaatgaaattaatctaaac
gtacaagatttaaatctcactatagatccacaaatggaaccaccaaacgataccgaagcc
aaactgctgagacaaatagttctcgctggaatggcggatcagattgcaaagaaagtaatg
ccagacgaaattggcgaagatcaagacaagaataaatggaaatacgcttacaaaaccttg
gatatggaagatccagtattcatgcattcgtcgtgcgttctccggaagtcgtgtcccgaa
tgggtggtttatcaagaagtatacgagacgaataaaatgtacatgcgtggcgtcacagtc
atagaaccagaatggctacctaaatttactccgtcgttgtgtcagctcggagaacctttg
accgatccaccaccgaggtatgacgaagagacgggaaaagttatgtgttccataacagga
acggtaggaagaggtggatggaagctaccaacaatcaacatggaacatcctctcaccgtg
gaaggagtgaagtggtttgcatgtttctttctagaaggcaaagtttgtccaaaattaaaa
cgattcgtgccttcgctcttatccactccacaaagtattaacaagtcatgggccaaatta
ataccacgaacacaagaaatgactcggctcttaatgtctcgtgcgatcatgtcgaaagaa
aagttattagaaacttggagggcagatgaaagttttcttctgtcagcctatcaaaaatgg
ctgccagaatcggctcatggacaagtcacgatcatttggccgcctgtataa
DBGET
integrated database retrieval system
