Colletes gigas: 122403807
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Entry
122403807 CDS
T07492
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cgig
Colletes gigas
Pathway
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122403807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgig03041
]
122403807
03009 Ribosome biogenesis [BR:
cgig03009
]
122403807
Enzymes [BR:
cgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122403807
Spliceosome [BR:
cgig03041
]
Complex A
U1 snRNP components
U1 related factors
122403807
Complex B
122403807
Ribosome biogenesis [BR:
cgig03009
]
Eukaryotic type
Pre-60S particles
Helicases
122403807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
122403807
NCBI-ProteinID:
XP_043263481
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MRMAYRDRERGDRRGGGGGSRGGARFSRDGRFPSRDSNPSFSNFKNRQPGERLRKPRWDM
STLQPFRKDFYQPHPNVTTRSPHIVEAYRSDKEITVKGTNLPSPNIFFEEGGFPDYVLNE
IRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINNQPRLNRNDGP
IALILAPTRELAQQIQQVASDFGVSSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRL
IDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRN
LAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKEGKLMKLLEEISNEPENKTIIFV
ETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAILVATDVAARGLDVE
DVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKASDLIQVLEEAKQVVN
PKLYELSRNPGIYKRGRYGGRSGGGSGRGSRGSRGGGRDGGDRGRFERGSGGGDRGNKWN
GNNSSNVGGSYGSKPFSQSSYGTSSGYSQNGSCYGSGTAGGSNYRQQNGY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggcgtacagagaccgcgagcgtggtgacagaagaggcggcggcggtggctcc
cgcggaggcgcacgattttctcgcgatggtcgcttcccctcccgcgactcgaacccctcc
ttctccaacttcaaaaaccgtcaaccaggagaacgtctccgcaaaccgcgctgggacatg
agcaccctccagcccttcagaaaagatttctaccaacctcacccaaatgttacaaccaga
agtcctcacatagtagaagcttaccgctctgacaaggaaataactgtcaaaggtaccaac
ctcccgagcccaaatatcttctttgaagagggcggtttcccagactatgttttaaatgaa
attagaagacaggggttcggggaaccgactgctattcaggcccaaggttggccaattgct
ctttctggtcgagatatggtgggaatcgcgcagacggggtcaggaaagaccctggcctac
atcctgccagctattgtccacataaataatcagcctagattaaatagaaatgatgggcct
atagctctgatcctggccccaacgagggaactggcccaacagattcagcaggttgcttca
gattttggggtgtcttcacaagtgaggaatacttgtatttttgggggggcccccaagggt
ccacaagctagggatttggagcgtggggtggagatctgcattgctactcctgggaggctc
atcgacttccttgaaaggggaaccaccaacctacggaggtgtacgtatctggttctggat
gaagcggataggatgctggacatgggttttgagccgcagatcagaaaaattgttgaacaa
attcgacccgatcgtcagactcttatgtggtctgcaacctggcccaaagaagttcgaaac
ctagctgaagaattcctcaccgactacatacaaataaatattggatcactgcaattggct
gcaaatcataatattctccaaatcgtagatgtctgcgaggagtatgaaaaagaaggaaaa
cttatgaaactattggaagagatttctaatgaaccagagaacaagactattatttttgtg
gaaaccaaaaggaaggttgatgatattacaagagccattaataggtacggatggcaagca
attggaatccatggtgataaaagtcagcaggagagagactacgtattgaatcagttccgg
aacagcaggtcagcaatcttggtggcgacagatgtagcagcgaggggcttagatgtcgaa
gacgttaagtttgtgattaatttggactacccgtcgaattccgaggactacgtgcaccgt
atagggcgcacaggacgctcgcaacgaaccggaactgcctacgcatttttcacaccagga
aatgctcacaaggccagtgacctgattcaggtgctcgaagaagcgaaacaagtggtcaac
cctaagctctacgaactctccaggaacccaggaatctacaaaagagggcgttacggtggg
cgctccggcggtggaagtggtcgaggctccagagggtcacgcggaggggggcgggacgga
ggggatagaggcaggtttgagaggggcagcggcggcggagaccgggggaacaaatggaat
ggaaataacagtagtaacgtaggcggaagttatggcagtaaaccgttctcgcagagcagc
tacggaacctcgagcggctacagccaaaacggaagctgttatgggagtggaacagctggc
ggaagcaattatagacaacaaaacggctattaa
DBGET
integrated database retrieval system
