Colletes gigas: 122403842
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Entry
122403842 CDS
T07492
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgig04121
]
122403842
Enzymes [BR:
cgig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122403842
Ubiquitin system [BR:
cgig04121
]
Ubiquitin ligases (E3)
U-box type E3
122403842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-CCHC_2
zf-CCHC
U-box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
122403842
NCBI-ProteinID:
XP_043263535
LinkDB
All DBs
Position
Unknown
AA seq
1957 aa
AA seq
DB search
MSVHYKFKSTLDYDTVSFDGLHISVADLKKAIFHQKRIGKNTDFDLQITNAQTKEDYTDD
NALIAKNTSLIVARVPLTVQQKRSWDRNETPSFSNLKDEASLGRAVDLTRLDGSEEDKIR
AMMTQSTQDYDPSNYMKIRGANQTGDVPANYRCYKCHQPGHWIKNCPLGINQEPIEIKKS
TGIPRSFMVPVEGPRVPGAMMTPTGQYAVPAIDHQAYKEGKKERPPFSQDPEPAVEKPEI
PEDLLCNICKDLLTDAVMIPCCGNSFCDECIRTFLLESEEHECPDCNEKDVSPETLIPNR
FLRNAVMNFKNETGYAKRQTYRQPMQTNRQPVMQTEQQKAEQASNQIKTVQTASATDTPS
QECAESQSANIESASQQFSASNIQPQATTLPESTSESDLQSDSVTKLTTDEETEVPPPPG
TEPLLPIPAIGSSPERDRERSDPPCREKKDRDNEYLGERQPRERRRSFSRDGHRDRSGER
GRRMENLRPVSRRRSLSPRHSQHSDYSSQGTPLPHLMNPPPTKNYQGLPPDDGHYPSSMH
YDSAIRRSTEDRPGTPTVDEPHLHVPSSGNQPPLLPFPPGEDRIPQPSYNQPPPNVQPHN
PPLLPDPYMSHRIPIYPHQQGSHYGPPRYERPPYQQQGYRPSQPPRNYNGPPRPIRGLHH
LSYRGLQPPPPGLSRNIHNGNPPGIIDDPLEAFERMLREKDERDRRLGKHRRRSRTRSRS
RSYSRSRSRSFGRRSPFPARLSRSRSPPSKRRSSRSPLPLRVRSRTPKRRSRSGSFSISR
SRSYSRSQSPRLSLSRDRDRDRDRERDRDRDRDRDRDRDRDRDRDRDRDRERERERERER
ERDRERERDRDRDRDRDRDRDRDRDRDREILSRYRSPARSPLRFQRERDRDRERPRSREP
REGYNSYYNDSPAHDYQFRDRERDLPPRERPIPRYPIRNQPTQHNIPPLLPHLVTGGHPP
PLMSLGPPPTDRKDYYDSYNRYPGPSTQRFGSPLRDVPHKKRFDDVAPPGTEGYYDLSPP
GVEHSDRSLRDDRDRRVLREQEDREHSLKDHDVEERDRLSIRDDRGRERDDRLRERDERD
RRVLNRDREDRERPALSRDHDDRPREKDERDRREKEKERDDRHNTRDRRDDDRHLEKKDY
DKDRYRDERDRHRQDDKSRTREKDRRERDYDAEKDRDRHERYERRSVERKKTRKSPTPYT
QKGRTDAKDISPERIKKKEKDHEEKSEEKKKEKKLKDKKKKKDDEKEKKKKKKKDKKSGQ
KEITKDEPIKSAEHEDLMVENKQEVMSPTKTDVVKPGSEDENIDNRIDCLPTDVIMEESI
KEEFEDKSLAINPEPPEFNETSPERIDHTEFGTNPPNPNFKPIPELKSEIKPIDSLYSGL
DDAEINTVITEKYSLLSENETEDKNTLLVEKSPKKDEFLAPMPELSKWERDDTIEKSDEV
CESPIEKIQLDEPKSTKVVTSEVLKRAENAIFQKAINAIRPIEIKKISESRKVLYQNPEP
KVLEIEPNREPRKSVNVTINVGRNERNVEITEPVKKAKLDRTKFKPVPETYSPTRLSAKE
RLGEKVEENKERKISPIKSFLDRRETKSETQSRSRSPRSGRDKRISPLLDRRVDSSLSLS
GNERKVFLDDRKRDNKDRGDRSKDRNDFRSERHDMRSERDPRIDSRGDFRSGRNDSKGDK
MDKDREKERDRERRGRTPTCTFKRSEIPKVGLMKGKDDEDDRRRDKKTKDDKKRKKEHRS
RSKSKEHKKRKDKKHKKDKEKNLEKKQKHKDSLALKEKPETNETKINYENPEPPVIESVK
KQRKNPRLVSDRKRSMLDEASFEPDYSASDSESDGEDGKIMPLPVKKLKIDEPDMDKEVE
IKTFKKRSKSTSSEDSSTSSDTSSTDSDSSDESHKKKKKKHKKHKKKKSVKRDSSSDSDS
YSDSSDTSSDEEKHKKKSKKSKSRNKQAKKKKKSKHK
NT seq
5874 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtacattataaatttaaatccactttggattatgacactgtgtccttcgatgga
ttacatatttccgtagcagatttgaaaaaggctattttccatcaaaagcgtataggaaag
aatacggattttgacttgcaaataacaaatgcgcaaactaaagaagattacacagatgat
aatgcgttgattgcaaagaatactagccttattgttgctagagttccattaacggtgcaa
cagaaacgatcgtgggatagaaatgaaactccttcgttcagtaacttaaaagacgaagcc
agtcttggtcgagctgtagatcttactaggctcgatggctctgaagaagataaaattcga
gcgatgatgactcagtcgacacaagactatgacccatcaaattacatgaagatacgtgga
gcgaatcaaactggtgacgtacctgcaaattatcgttgctacaaatgtcatcagcctggt
cattggataaaaaattgtccgcttggaataaaccaagaacctatagaaattaagaaaagc
acaggtattcctaggagttttatggtaccggtagaaggaccacgagttcctggtgctatg
atgacgcctacaggtcaatacgcagttccagccattgatcatcaagcttacaaagagggg
aaaaaagaacgacctccattctcgcaagatccagaacccgctgtggaaaagccagaaatt
ccggaggacctattatgcaacatttgcaaagatcttttaaccgatgcagtaatgatacca
tgttgtggaaattcattttgcgatgaatgtatccgtacattcttattagaatctgaagag
cacgaatgtccagactgtaacgagaaagatgtttcgccagaaacgctaataccgaaccgt
tttctgcgaaatgctgtaatgaactttaagaacgagactgggtatgccaaaaggcagacg
tatagacagcctatgcaaacgaacagacagcctgtgatgcaaacggaacaacaaaaagct
gaacaagcttcgaatcaaattaaaactgtccaaacagcgagtgccacagatacaccctct
caagaatgtgcagaatcgcaatcagcaaatattgaatctgcttcgcaacaattttcagcc
agtaatatacaaccacaagcaacaactcttcctgaatcaacatcagaatctgatttgcaa
agtgattccgtgacaaagttgactactgacgaagaaacagaggtaccaccgcctccagga
acagagccgttacttccaatacctgctattggcagctcaccggaaagggacagagaaaga
agtgatcctccgtgtcgtgaaaagaaagatcgtgataatgaatatttgggagaaagacaa
ccgagagaacgcagacgaagctttagcagagatggtcatcgtgacagaagtggtgagcgt
ggtcgtagaatggaaaatttacgaccagtaagtagaagacggtccttgtcccctagacac
tctcagcacagcgactacagttctcagggaacgccattgccacatttaatgaacccacct
ccgacaaagaattatcaaggactgccacccgatgatggacattatccatccagtatgcat
tatgatagcgccatacgtagatcaactgaagatcgtccaggcactccgacagttgatgaa
ccacacttacatgtgccttcttctggcaaccagccacctcttttacctttcccaccagga
gaagatcgtatcccacagccaagctataatcagcccccacctaacgtacaaccacataat
ccgcctttattaccagatccatacatgagtcatagaataccaatatatcctcatcaacaa
ggatctcactatggacctccaagatatgaaagacctccttatcagcaacaaggatacaga
ccatcgcaaccgcctcggaattacaatggtccgccacgtccaatcaggggattgcatcat
cttagttatagaggattacaaccaccgccacctggattgagtagaaatattcataatggc
aatccacctggtataattgatgatccattagaagcttttgaacgaatgctcagagaaaaa
gacgaacgcgataggcgacttggaaaacacagaagaagaagtagaacacgatcgagatct
cgtagttatagcaggtctagatcacgttcgtttggccgtagatcaccatttccggctcgt
ttaagtcgatctagaagccctccttcgaagagaaggtcctcgagatcaccactacctctt
agagtgcgaagccgcactccgaaacggagatcgagaagcggaagtttctcaattagcaga
tctagatcgtattcacgtagtcaatctcccagattatctttgtcacgagatagagacaga
gacagagatcgggaacgagatcgtgaccgtgatcgcgatcgtgatcgtgaccgtgatcgt
gatcgtgatcgtgatcgtgatcgtgatcgtgaacgagaacgagagcgagaacgagagcga
gaacgggatcgtgaacgtgaacgtgatcgtgaccgtgaccgtgatcgtgatcgtgatcgt
gaccgtgatcgtgatcgtgatagagaaatactttctagatatcgatcaccagctagatca
cctctaagattccaaagagagagggatcgtgatagagaacgaccaagatcgcgcgagcct
agggaaggatataatagttattacaatgattcgccagcgcatgattatcaattcagagat
cgagagcgtgatttacctcctagagagaggccaataccgaggtatccgataaggaaccaa
ccaactcaacataacataccacctttgctgccacatctagtcactggaggtcacccaccg
ccgcttatgtcattgggacctccgcctacggacaggaaagactattatgattcctacaac
aggtatcctggaccatccacgcaacgttttggcagtcctttacgagacgtgccccacaaa
aaaagatttgacgacgttgccccccctggtacagagggttactacgatctttcaccaccg
ggcgttgaacattctgatagatctctgcgcgatgatcgtgatcgacgcgtattaagggaa
caggaagatcgtgaacattccctgaaggatcatgatgtcgaagaacgagacagactatct
ataagagatgacagagggcgtgaacgcgacgatcgtttgcgcgaaagagacgaacgagat
cgaagagttttaaacagagatcgcgaagatcgtgagagaccagcgttatccagagatcat
gatgacagaccgcgagaaaaggatgaacgcgacagaagggaaaaagaaaaagagcgagat
gacaggcataatactcgtgatcgtagagacgacgacagacatctcgagaaaaaagattat
gacaaagatcgttacagggatgaaagggaccgtcacaggcaggatgataagagtcgtaca
cgcgagaaggacagacgtgaaagggattatgacgctgagaaagacagggaccgacacgag
cgttacgaaagacgctccgtggaaaggaaaaagaccaggaaaagtccaactccttacacg
cagaaaggtaggacagatgcaaaagatatatcaccggaacgcataaagaaaaaggaaaag
gatcacgaagagaagagcgaggaaaagaaaaaggagaagaaactcaaagacaagaaaaag
aagaaggacgatgagaaggagaagaagaagaagaagaagaaggacaagaaatcgggccag
aaagagatcacgaaagacgagcctattaaatctgctgagcacgaagacttgatggtagag
aataaacaagaggttatgtcacccacgaaaaccgatgtcgtgaaacctggcagcgaggat
gaaaatattgataatagaatagattgccttcctacggatgttattatggaagagtcgatc
aaagaagaatttgaagataaatctctagctataaatccggagcctccagaatttaacgag
accagtccagaaagaatcgatcacacagaatttggaacgaatcctcctaaccctaatttc
aaaccaatcccagagttaaaatcagaaataaaacccattgatagcctttacagcggactg
gacgatgcagaaataaatactgtgatcacagagaagtattctttgctgtcagagaacgaa
acggaagataaaaatactctattggtggaaaagtcgcccaaaaaggatgagtttttagct
cccatgccggaactgtctaaatgggaaagagacgataccatagaaaagtcagacgaagtg
tgcgaatcgcccatagaaaaaatacaactggatgaacccaagtcgacaaaagtagttacg
tcggaggtgttaaaacgagccgaaaacgcaattttccagaaagctattaacgccattaga
cccatcgagattaaaaagattagtgagagtagaaaagtattgtatcagaatccagagccg
aaagtacttgaaatcgaacctaacagagagccaaggaagagcgtgaacgtcaccataaac
gttggacggaatgaaagaaatgtagaaattacagaaccggtgaagaaagctaaattggac
aggacgaagtttaaaccagtccctgagacttactcgcctacaaggctttctgctaaggaa
aggctgggtgaaaaagtggaagaaaacaaagaaaggaaaatcagccctattaaaagtttc
ctggatagacgggagacgaaaagtgaaactcagtctagaagtcgatctcctagaagtggc
agagacaagagaatttctccacttttagatagacgcgttgattcgtcattgtcattgtca
ggaaacgaacgcaaggtgttcctcgatgatcgaaaacgggataataaagatcgaggcgat
cgttcgaaggacagaaacgattttcgaagcgaacgtcatgatatgaggtccgaacgagat
ccaagaattgattctagaggtgactttagatcgggtcgaaatgattctaaaggtgataaa
atggacaaagatagagagaaggaaagagatagagaaagaagagggagaacgccaacctgc
acgtttaaaagaagcgaaattccaaaggtaggtcttatgaaaggtaaagacgacgaggat
gatagaagaagagataaaaagacgaaagatgataagaagaggaagaaagagcatcgaagt
agaagtaagtctaaagaacataaaaaacgaaaggacaagaagcataaaaaggataaggag
aagaacttggagaagaagcaaaagcataaagatagtcttgctttgaaagaaaagccagag
actaatgaaactaaaataaattatgagaatcctgagcctccggttatagagtctgtgaag
aagcaaaggaagaatccaagacttgtttccgatcgtaagcgcagtatgctcgacgaagct
agtttcgagcctgattatagtgcttcagattcagagtctgacggcgaggatgggaaaata
atgccgctacctgtcaagaaactaaaaattgacgagccagatatggacaaggaagttgaa
ataaaaactttcaagaaacgatcgaagtctacgagcagcgaagattcgtccaccagttcg
gacacttcgagcaccgattcggacagttcggacgagtcgcacaagaaaaagaagaagaaa
cacaagaagcataagaaaaagaaatctgtaaaaagggacagcagctcggattccgattct
tattcagactcgtcggacacgagtagcgacgaggagaaacacaaaaagaaatcaaaaaaa
tcaaagagtagaaataaacaggcaaagaagaagaaaaagtcgaagcacaaatga
DBGET
integrated database retrieval system
