Colletes gigas: 122404026
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Entry
122404026 CDS
T07492
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cgig
Colletes gigas
Pathway
cgig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122404026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgig03400
]
122404026
DNA repair and recombination proteins [BR:
cgig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
122404026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
HDA2-3
AAA_34
ZGRF1-like_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
122404026
NCBI-ProteinID:
XP_043263814
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MYRNNQTKGFKPVLKCQQSMDDKTKENLENDKSLENLNEITCRSTTKILNLFKRPIENCN
KEVLEKDDSTKTNENNSGDGENSPSVIDNNSLSSIFNVVIGKKSTRKHKKWDDDGTLEVT
GKHAILKDSEGKIIHRKVVNPETLVEGGRLYFDNKEIEIIDRATSRQLLSNESVKELIPE
PPRKKLKTSSSSVCLPFGSLKKGLKLTCNSLVMPSLNTSRNWMENDIPEKEEEVSVDACL
VNVLRPHQRYGIVFLYECIMGLKVPNCSGAILADEMGLGKTLQCITIIWTLLKKGPYGKP
VLKYVLIVTPSSLCNNWNKEFGHWLGFHRICPYVVNAKNKLKDFKKQMKNSIMIVSYDML
IRCQEELEQMTFDLIVCDEGHRLKNNDIKAAKILNNMNCKRRILLSGTPVQNDLREFFAL
LDFVNPGILGSNHEFKNYYENPIVASQCPHAPDSVVSLGIERANELNEKTKYFVLRRTQD
TINKYLPPKHELVVFCRLSNEQERLYSLVTDAWFNTTALPNNSIPHLTVITVLKKICNHP
DLFYNEKNDFLHNVNVNKISQIKNSVSTSKNAYCGKISVVQTLMRNLKETDEKLVLISYY
TQTLDVLETVCNAESMKFLRLDGSTPNSSRPKIIEQFNSKIDNSKIFLLSAKAGGVGLNL
PGASRLILFDSDWNPASDSQAMARIWRDGQKKDVYILRLLTTGTIEEKIFQRQISKAGLS
ETVMDLNYFTSLKLSMSELKDLFTLTTDTKCSTHDLMKCDCNGYKKMEKKVEKSDHEDIR
EHQLILENKTPQQNLTINQLLEWEHYQQPVPDELMQEIMLSEMSDHVTFLFKNSIL
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgaaataaccaaacaaagggtttcaaacctgttttaaaatgccaacaatcaatg
gacgataagaccaaggagaatttagaaaatgataaatcgttggaaaatctaaatgaaatt
acttgtagaagtactacgaaaattcttaatttattcaaaagaccaatcgagaattgtaac
aaagaagtactcgaaaaagatgattcgaccaagacgaacgaaaacaattcgggcgacgga
gaaaattcaccttctgttattgataacaattctttgtctagtattttcaacgtagtaatt
ggtaaaaaatccacaagaaaacataaaaaatgggatgatgatggaactttggaagttaca
ggaaaacacgcaattttgaaggattcagaaggcaagattattcataggaaagtggttaat
ccagaaacacttgtggaaggtggtagattatattttgataataaagagattgagattatt
gatagagcaacatcaaggcaattattgtcaaatgagtcggtcaaagagttaattccagag
ccacccagaaaaaagttaaaaacttcaagttccagtgtatgccttccctttggatcttta
aaaaaagggctcaaattaacatgcaattctttggtaatgccttctttgaatacttcaaga
aattggatggaaaatgatattccagaaaaggaggaagaagtgtctgttgatgcatgttta
gtaaatgtacttagaccacatcaacgttatggtattgtatttttatatgaatgcatcatg
ggtttgaaggtacctaattgctctggtgcaattttggctgatgaaatgggccttggtaaa
acattacaatgcattacaattatttggacactgttgaaaaagggaccgtatggaaaacca
gtattgaaatatgtattaatagtaactcctagtagcctatgcaataactggaacaaagaa
tttggacactggctgggttttcatagaatctgcccatatgttgtaaatgccaaaaacaaa
ctgaaagatttcaaaaagcaaatgaaaaattcaataatgattgttagttatgatatgctt
attagatgtcaagaagaacttgaacaaatgacctttgatttaattgtgtgcgatgaaggt
catagattgaaaaataatgatattaaagcagcaaagatattaaacaacatgaactgcaaa
aggagaattctcttgagtggaacccctgtacaaaatgatttacgagaattttttgcccta
cttgatttcgtaaacccgggtatattgggtagcaatcacgagtttaaaaattattatgaa
aatcctattgtagcttcacaatgccctcacgcgcctgacagcgttgtatctctgggaata
gaaagggccaatgaattaaatgaaaaaaccaagtatttcgttttaagacgaacacaagac
acaattaataaatatttaccacctaagcacgagctagttgtattttgccgtttatcgaac
gaacaggaacgtctatattctctcgttacagacgcttggtttaatacaactgcactacca
aataacagcattccacatctgacagtaataacagttctcaaaaagatctgtaaccatcct
gacttattttacaacgagaagaatgattttttgcataacgtaaatgtaaataaaatttcc
caaataaaaaattctgtaagcacttcgaaaaatgcatattgtggaaaaatttcggttgta
caaacattaatgagaaatttaaaggagacagatgaaaaattagtcttgatttcgtactat
acgcaaacgcttgatgtattggaaactgtttgtaacgcagaaagtatgaagtttctcaga
ttagatggtagtacaccaaacagctcaagacctaagatcattgaacagttcaattctaaa
attgataacagcaaaatatttttattaagtgcaaaagctggtggggttggattaaatttg
cctggtgcatctagattgatattgttcgactcagattggaatccagcatccgattctcaa
gccatggcgcgaatttggcgagatgggcaaaaaaaagatgtttatatattacgattacta
acaacaggtaccattgaagaaaaaatctttcaaagacaaattagtaaagcaggcttaagc
gaaactgtgatggatctgaattactttacttccctaaaattgtctatgagcgaattaaag
gacctgtttacattaacgacagacacaaaatgttcaactcacgatttaatgaaatgtgat
tgcaatggttataaaaaaatggagaagaaagtagaaaaatcggatcacgaagacatacga
gaacatcaattaatattagaaaataaaacgcctcaacaaaatttaacgataaatcaactt
ttagaatgggagcattatcaacaaccagttccagatgaactgatgcaggaaatcatgtta
tcagaaatgtctgatcatgtaacgttcttatttaaaaattccatttta
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