Colletes gigas: 122404185
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Entry
122404185 CDS
T07492
Name
(RefSeq) ATP-dependent RNA helicase bel isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122404185
03041 Spliceosome [BR:
cgig03041
]
122404185
03036 Chromosome and associated proteins [BR:
cgig03036
]
122404185
Enzymes [BR:
cgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122404185
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122404185
mRNA cycle factors
Common to processing body (P body) and stress granule
122404185
Spliceosome [BR:
cgig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122404185
Chromosome and associated proteins [BR:
cgig03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122404185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HEM4
Motif
Other DBs
NCBI-GeneID:
122404185
NCBI-ProteinID:
XP_043264052
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSNAANQNGSGLEQQLAGLDLSGSRQPSRDRYVPPHLRNKSGSNAPSGRDQHSSSNSRSF
PERERGGDRVHERERERDRDGDRGGSGFREPRNSRDVDFGNFGNFGGRNRRSANQENGRD
YRYSNSERERERDRPVSSSWKDPRATGSWQENRNDHRMGGSSGGNRGWNNDREGGRRNSE
NDWTIPTGRDERLEVELFGTGNTGINFSKYEDIPVEATGDNIPTHISSFDEVKLTEIIKN
SITLAGYDKPTPVQKYAIPIIIGRRDVMACAQTGSGKTAAFLVPILNQIYESGPIPPPPH
VNSSGKRKQYPLGLVLAPTRELATQIYDEARKFAYRSRMRPAVVYGGSNISDQMRELDRG
CHLLVATPGRLVDMLSRGKIGLHNCRYLVLDEADRMLDMGFEPQIRRIVQEDRMPPTGER
QTLMFSATFPKEIQILARDFLSNYIFLAVGRVGSTSENITQKIVWVEEHDKRSYLLDLLQ
ASVFSDASAESLTLVFVETKKGADMLEEYLHQMGYPVTSIHGDRTQREREDALRRFRAGK
APILVATAVAARGLDIPHVKHVINFDLPGDVEEYVHRIGRTGRMGNLGLATSFFNHKNHN
LVRDLVSLLIEANQELPTWLDEMFGDSVRYSGSGSRRTGGGGGGGGSTKGRFSSGFGARD
YRQQPSSGPTRNSGPSNRSGSYGGNYGNYGGNYSNSSYNSSANNGSNIGPDWWETWQK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgcagccaaccagaatggatcaggtctagagcagcagttagctggtctggac
ttgtcgggctcccgccaaccaagcagggaccgctacgtaccaccacacctacgaaataaa
tctggaagtaacgcgccttctggcagagatcaacattcttcttccaactcaagatcattt
cccgaaagagagagaggaggtgatcgcgtgcatgaaagggaaagggaacgggatcgtgat
ggggatagaggtggttcaggattcagagagccacgtaattcccgcgacgtcgattttgga
aactttggaaattttggtggacgcaatagacgtagtgccaatcaagaaaatggaagagac
tatagatactcgaattccgaacgtgagcgagaacgcgatcgcccggttagctccagttgg
aaagaccctagagccacaggcagctggcaagagaacagaaacgatcatagaatgggcggc
agcagtggcggcaacagaggatggaacaacgatagagaggggggtagaagaaactccgag
aatgattggacaattcctactggaagagacgagcgactggaggtggagctgttcggtact
gggaatactggtattaactttagtaaatatgaggatatcccggttgaggctaccggagac
aacataccaacacacatttcatctttcgacgaggttaagctgacagagataataaagaac
agcatcactttggctggttatgataagcctacaccagtacaaaaatacgcgataccaatt
attattggtcgtcgcgatgttatggcctgtgcccaaactgggtctggtaaaacagcggcc
tttttagtgccaatattaaatcagatttatgaaagtgggccaattccaccaccaccacac
gtcaattcctctggcaagcgtaaacaatatccgctgggtctggtactagcacccacaaga
gagctcgccactcagatatatgacgaagcaaggaaatttgcgtatagatcgcgtatgcgt
cctgctgttgtttatggtggttcgaatatttcagaccaaatgcgagaattagatcgtggc
tgccatcttcttgtagcaacacctggtcgccttgtagatatgctgagtcgcggcaaaatt
ggtttacacaattgccgatatttagtattggatgaagcagatcgtatgttggatatgggt
ttcgaaccacagatcagacgcatagtccaagaggatagaatgcctccaaccggggaaagg
cagacacttatgttttcagctacgttcccgaaagagatacagatattggcaagggatttc
cttagtaactatatctttttagccgtgggccgtgtcggttctacatctgaaaatattact
cagaaaatcgtatgggtggaagaacacgacaagcgttcttatttgcttgatcttcttcaa
gctagcgttttctcagacgcttcagccgagtcattgactttggtatttgtggaaacgaag
aagggcgccgatatgttagaagaatatttgcatcaaatgggatatccggttaccagcatt
catggtgatcgtactcagcgcgaacgagaagatgctttacgccgtttccgtgctggtaaa
gcgccaatacttgttgcaactgccgttgctgctcgtggacttgatattccgcatgttaaa
catgtgataaacttcgatttaccaggcgatgtagaagagtatgtccaccggatcggtcgt
actggtcgcatgggcaatttaggtcttgcaacgtcatttttcaatcacaaaaatcataat
ttggtgcgcgatttggtgtctctgcttatcgaggctaaccaagaacttccaacatggttg
gacgaaatgttcggtgattcagtaagatattctggaagtggatctcgacgtactggtggt
ggtggtggtggtggtggtagtactaaaggccgatttagtagcggatttggtgcaagagat
tatcgtcagcaacctagttccggacctacacgtaacagtggtccctccaacagatcaggc
agttacggaggaaattacggaaattacggaggtaattatagtaattcatcgtataatagt
tctgctaacaacggcagcaatattggccccgattggtgggagacatggcagaagtaa
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