Colletes gigas: 122404252
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Entry
122404252 CDS
T07492
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgig03016
]
122404252
Enzymes [BR:
cgig01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
122404252
Transfer RNA biogenesis [BR:
cgig03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
122404252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Muskelin_N
Motif
Other DBs
NCBI-GeneID:
122404252
NCBI-ProteinID:
XP_043264122
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MMICQFYTLRINEFTITKIRFEKFHKFSLCTLKMIDLISSRNNVFVWSAEDWLKLRKDYR
IVGDLIGCLPKKPRQDILSGLPLLLQPEEVSLLLEKNLARLIRYPCFQKPPTDLLKQVFK
EYRNTLYIEQEECLRKERKKQVIGMMDKIIEGKKRKILGIETRKKKVKKPLDANIQEALN
NIEINKQDLLEEEMAKLPKLEKSDALVQTHTVYPWLDNVEIIKWKYPSNCREQLRYKTYK
DLWERGYYVTNGGKFGGDFLIYPGDPIMFHSQFIIQCKDRNEEIPITELSAQCRIACHVR
KVRVYAFFSNDQNNILYQSFQWAESNILENG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatgtcaattttacacattacgcattaacgaatttacaattaccaaaatacgt
ttcgaaaaatttcacaaattttctttatgtacattgaaaatgatcgatttaatttcatct
agaaataacgttttcgtatggagtgcagaagactggttaaaacttcgaaaagattacaga
atagttggtgatttaataggttgccttccaaagaaacctagacaagatatactttcaggc
cttccgttgcttctacaaccagaagaagtgtctcttttacttgaaaaaaaccttgcacga
ctcattcgttatccatgtttccaaaaaccaccaacagatttgttgaaacaagtttttaaa
gaatatagaaacacattgtacatagaacaagaagaatgcttaaggaaagagagaaagaaa
caggtaattggaatgatggacaagattatagaaggaaagaaacggaagatactcggaata
gaaacaaggaaaaagaaagtaaagaaaccactagatgcaaatatacaagaggctcttaat
aatatcgagataaacaaacaagatttattagaagaagaaatggcaaaactacctaaacta
gagaagagcgatgctttagttcaaactcatacggtatatccatggctagataatgttgaa
ataatcaagtggaaatacccatccaattgcagagaacaattgcgatacaaaacgtataaa
gatttgtgggaaaggggatattatgtaacaaacggtggaaaatttggtggagatttttta
atataccctggagatcctattatgtttcactcccaatttataattcaatgcaaagacaga
aatgaagaaattccaataactgaactgtcagcccaatgtcgaattgcatgccatgttcga
aaagtacgtgtttatgcatttttctctaatgatcagaataatatattgtatcaatcattt
caatgggcagaaagtaatatactcgagaatggataa
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