KEGG   Colletes gigas: 122404321
Entry
122404321         CDS       T07492                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
cgig  Colletes gigas
Pathway
cgig03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122404321
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgig03019]
    122404321
Messenger RNA biogenesis [BR:cgig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122404321
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 HBS1_N GTP_EFTU_D2 MMR_HSR1 AAA_22 Dynamin_N SpoIVA_ATPase
Other DBs
NCBI-GeneID: 122404321
NCBI-ProteinID: XP_043264190
LinkDB
Position
Unknown
AA seq 719 aa
MSRHRDVRSMNYSEEYEGYDDVYGHSVEDDYCVSPSVEQFLFDRSKQQNMASFITEPDIV
EDNEDVVESTPKEEETILTELEKAKLISCMESIKNIIGDTAPDFEIKKRIIQSNFNAEVA
LDLLLKESSPKNVTESPAISKDNTEHYPDAASIKSQSSPFIIPKLSFKKQNNISKKLLSK
STFQITPSNVKIIPAGKRSVVKGFNLSGIENIDQLNSRVESPRSQSPFSEYNSPEIRRKK
HTISKEKKVISSSTNSPQCQSPILEHVMPNLDSKAKLSEEKIDALKIYKSKRENSKEQLH
LVVVGHVDAGKSTLLGRLLCDLGQVPSRLIHKYQQESKKIGKQSFAYAWVLDETGEERER
GITMDIGHSKFETKTKSITILDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFDS
GGQTREHALLLRSLGISQLAVVVNKLDTVEWSEDRFNEIIDKLSVFLKQAGFKDNVTFVP
CSGLSGENIVTKSKGSLSNWYMGPTLVNVIDNFKCPDRPINKPFRFSINDIFKGSGSGFC
VFGHIETGMVSLGDKLLVLPRNEIAILKGLQVDEVSITNAFAGDRVALTLSGIDQQNVGI
GDIICNPQYPVPVTTCFQAHVVIFAVKMPIVKGLPVIMHQQSLVQPAVISKLIVQLHRTT
GEIVKKKPRCLPKNSSAIIEIVTQNPVCMELYKYIKQLGRVMLRVEGITVAAGLITKIK
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgtcccgtcatcgagacgttcgatctatgaattattcagaagagtatgaaggttatgat
gatgtctatggacattctgtggaagatgactactgtgtatctcctagtgtggaacaattt
ttatttgatcgaagtaaacaacaaaatatggcatctttcattacggagccagatatagtg
gaagataatgaggatgttgtagaatctacacctaaagaagaagagacaatactcacagaa
ttagaaaaagctaaacttatatcatgtatggaatctatcaagaacattataggagacact
gcacctgactttgagataaagaagagaattattcaatcaaattttaatgcagaagtagca
cttgatttacttttaaaagaatcttctccaaaaaatgttactgaatcacctgcaatcagc
aaggataatacagaacattatccagatgctgcatctattaaatctcaatctagtccgttt
attatacctaaattatcatttaagaaacagaataatataagtaaaaagttgttgtccaaa
tctacatttcaaattacaccttccaacgtgaaaattattcctgctggaaaacgatctgta
gtaaagggtttcaatttaagtggaatagagaatattgatcaactgaattctcgcgttgaa
agtcctcgttctcaaagcccattttctgagtataacagtccagaaataaggagaaaaaaa
catactatatcaaaggaaaaaaaagtgatttcttctagtacaaacagcccacaatgtcag
tcacccatattagaacatgtgatgcctaatttggattctaaagcaaaacttagtgaagaa
aaaattgatgctttaaaaatatataaaagtaaaagggaaaatagcaaagaacaattacat
ttagtggtggttggacatgtagatgcaggtaaaagtactttactgggtcgacttttatgt
gacttaggacaagttccatcaagattgattcacaaatatcagcaagaaagtaagaagata
ggaaaacagtcatttgcatatgcatgggttcttgatgagacaggagaagaacgagaacgt
gggataacaatggatattggtcattcaaaatttgaaacaaaaacaaagtctattactata
ttggatgcacctggacataaggactttatacccaacatgattactggtgctactcaagca
gatgtggctttattagtagtagatgctacaagaggagaatttgaaactgggtttgacagt
ggaggtcaaactagagaacatgcattgttattacgttcattaggcatatcacagttggca
gtggtagtaaataaattagatacagtggaatggtcagaggataggtttaatgaaataatt
gacaaattgagtgtattcttgaaacaagctggattcaaagataatgttacttttgttcct
tgtagcggtctatctggcgaaaatatagtaacaaaatctaaaggatctttatctaattgg
tatatgggacctacattagtcaatgtcattgataattttaagtgtcctgatcgacctata
aataaaccattccggttttcgattaatgatatatttaaaggttctggatctggattctgt
gtttttgggcatatagaaacagggatggtgtctctaggtgataaacttttagtactacca
agaaatgaaattgcaatacttaaaggtttacaagtggatgaagtatctataacaaacgca
tttgctggggatcgtgttgctttaacattgtcaggaatcgaccaacaaaatgttggaatt
ggagacattatttgcaacccacaatacccagttcctgtaactacgtgtttccaagcacat
gtagtcatttttgcagttaaaatgccaatcgtaaaaggtcttccagtaataatgcatcag
caatctttagtacaacctgctgtgatttcaaaattaattgttcagcttcacagaacgact
ggtgaaatagtaaaaaagaaaccacgctgtttaccaaaaaattcgagtgctattatcgag
attgtaacacaaaatccagtctgtatggaattgtacaaatatatcaaacaattaggacga
gttatgttacgcgtagaaggaataaccgttgctgctggacttattacaaagattaagtaa

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