Colletes gigas: 122404607
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Entry
122404607 CDS
T07492
Name
(RefSeq) ATP-dependent RNA helicase p62-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cgig
Colletes gigas
Pathway
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122404607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgig03041
]
122404607
03009 Ribosome biogenesis [BR:
cgig03009
]
122404607
Enzymes [BR:
cgig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122404607
Spliceosome [BR:
cgig03041
]
Complex A
U1 snRNP components
U1 related factors
122404607
Complex B
122404607
Ribosome biogenesis [BR:
cgig03009
]
Eukaryotic type
Pre-60S particles
Helicases
122404607
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
122404607
NCBI-ProteinID:
XP_043264651
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MLRQVVGAFGTVLFRTYGAMSNGYHNGSYRGGKGQPRSRYASTTSTPNRGFGNRNNKNST
SSAGTNLRKPNWSFESLKPFKKDFYIPHPNVQGRHPRDVDVFRQDNQITLKGEKVPNPIQ
HFEEGNFPDYVMQGIRKQGFNEPTAIQAQGWPIAMSGQNMVGIAQTGSGKTLGYILPAIV
HINSQQPLNRGDGPIALILAPTRELAQQIQTVANDFGSLSYVRNTCIFGGAPKGSQARDL
ERGVEICIATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ
VLMWSATWPKEVRNLAEEYLTNYTQLNIGSLTLAANHNILQIVDVCQEHEKETKLGTLLQ
EIGNVNEDGGKTIIFVETKKKVENITRNIRRYGWPAVCMHGDKSQQERDHVLREFRNNRG
SILVATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRSNSTGTSYAFFTPQNSRQ
AKDLINVLKEANQVVNPKLSELADRSGNYGGRNRWGYGGGNRGRENMFCGTHKRFDTGRN
SSYNSS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttacgacaagtagttggtgcctttggaactgttctatttaggacttatggagctatg
tctaacggttaccacaatggaagttacaggggtggtaaaggacaaccaagaagtaggtac
gcgagtaccaccagcacacccaacagaggttttggaaaccgtaataacaaaaattctaca
agcagtgctggtactaatttgagaaaaccaaactggagttttgaaagtttaaagcctttt
aaaaaggatttctatataccacatcccaatgttcaaggacgtcatcctcgagatgttgat
gtatttagacaagataaccaaattactttaaaaggagaaaaagttcctaatcctattcaa
cattttgaggaaggaaatttccctgattatgtaatgcagggtattagaaagcaaggattc
aatgaaccaactgctattcaagctcagggatggccaattgcaatgtctggtcaaaacatg
gttggaattgcacaaaccggatctggaaaaacattgggatacattttacctgcaatagta
catattaacagccaacaaccattaaatcgcggtgatggaccaatcgctctcattctagcg
cctactagagaattggcacagcaaattcagactgttgctaatgattttggttctttgtct
tatgtgagaaatacttgtatttttggtggtgcaccaaagggaagtcaagctcgcgacttg
gaacgaggcgttgaaatctgcattgctacaccagggcggttaattgactttctggaacgc
ggtacgacaaatttacgcagatgcacttatttagtattggatgaagctgataggatgctg
gacatgggtttcgaaccacaaattcgaaaaattattgaacaaatcaggccggacagacaa
gttcttatgtggtccgctacttggccgaaggaggttagaaatcttgcagaggaatatctt
acaaattatacacaattgaatattggatcgttaacgctagctgctaatcacaatattctt
caaattgttgatgtctgtcaagaacatgaaaaggaaacaaaattggggactcttcttcag
gaaattggtaatgttaatgaagatggtgggaagactataatttttgtagagacaaaaaaa
aaggtggaaaatatcactagaaatattcgtcgttatgggtggcctgctgtatgcatgcat
ggtgacaaatctcaacaagaaagagaccatgttcttagagaatttaggaacaacagaggt
tcgattcttgtagcaaccgatgttgctgctcgtggattggatgtcgatgatgtaaaatac
gtgatcaacttcgattatccatcatcatctgaagactacatccacagaataggcagaact
ggccgttcaaatagtacgggaacaagttacgcgttctttacaccacaaaacagtcgacaa
gctaaagatttaattaatgtacttaaagaagccaaccaagttgtcaatccaaagctttca
gagcttgcagacaggagtggaaactatggtggccgaaatcgttggggatatggcggtggt
aaccgaggaagagaaaatatgttctgtggaacgcataaacgattcgatacgggaaggaac
tctagttataattctagttga
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