Colletes gigas: 122404648
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Entry
122404648 CDS
T07492
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
cgig
Colletes gigas
Pathway
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122404648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgig03041
]
122404648
Spliceosome [BR:
cgig03041
]
Complex A
U1 snRNP components
U1 related factors
122404648
Complex B
122404648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
HVO_2833_C
Tc-38
Propep_M14
DP-EP
Motif
Other DBs
NCBI-GeneID:
122404648
NCBI-ProteinID:
XP_043264745
LinkDB
All DBs
Position
Unknown
AA seq
836 aa
AA seq
DB search
MASNDGIPPSAAVPGFPPATPNIASSFVPPIMPTAPFIPPPSLPPGPPGIMPPQFSIPPP
GFSFPINAAPPPDAGVIAAPPQITASGIPPPAPIASEISGIQSITTAEKKTEWTEHKAPD
GRTYYYNSVTKQSLWEKPDELKTPSELLLSQCPWKEYKSENGKVYYHNVTTKESRWTIPT
ELEELKARIAAEEAAAAAAAVVASATNTIVPVAIQHLSPNIAITNASQTSTPEPGGKSAI
EQAMAATLAAINIPTPPAKPDEDSNSAKGSANDSRTSTPEPKMQFKDKKEAIEAFKELLR
ERDVPSNATWEQAVKLIQSDPRYPQMKKLNERKQAFNAYKTQKLKEEREQERLRLKKAKE
DLEQFLLENDRMTSTTKYYKCEEMFGNLEVWRAVGDSDRRDIYEDVIFNLAKREKEEAKQ
LKKRNTKRLAQVLDTMTDVTYRTTWQEAQALLLQHAAFAEDADLLEMDKEDALLVFENHI
RQLEKDEEEEKEHEKKRRKRQERKNRDAFISLLDELHEQGKLTSMSLWVELYPMLSADLR
FSAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVVCE
DRKSATLDAGNVKLTYNLLLEKAEAREKERVKEETRKFKKLETGFKNLLKTLNVDYQMTW
EDVRSKIEEEPDFKAITLESERVRIFKEYQHELEESCSHHHIRSKKKKTKKVKRKSRSRS
HSESEGSDKGIKKKRHKSRSPSIPSKSDSSESDTRKSKRKKNKKKRGRSHSRSHSRLPSS
EESPEQKRKEEKHRRPSAHSEGSVTENAEHHELSEDELEKQRAQLLRELQMQQEDN
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacgatggtataccaccatctgctgcagtacctgggtttccaccagcgact
ccaaatattgcttctagttttgtgccacctattatgccaactgcacctttcatacctcct
cctagtctaccccctggtccgccgggtataatgccaccacaattttctatacctcctcct
ggttttagttttccaattaatgctgctcctccaccagatgctggagttatagccgcgcct
cctcaaataacagcatcaggtattcctcctccagcgcctatagcaagcgaaatatctggc
attcaatctattacaacggcagaaaagaaaaccgagtggacagagcacaaagctccggat
ggtagaacatattattataacagtgttacaaagcaatctttatgggaaaaaccggatgag
ctaaaaacgcctagcgaattgcttctatcgcaatgcccttggaaagaatataaatcggaa
aatggaaaagtatattatcataatgtaacaaccaaggaatcaaggtggacaattcctaca
gaattggaagaactgaaagcaagaattgcagctgaagaagctgcagcagctgcagcagca
gttgttgcaagcgctacaaacactatagttcctgtagccattcaacatttatcaccgaac
attgcaattacaaatgcatctcaaactagtacaccggaaccaggtggaaagtctgcgatt
gaacaagctatggctgcaacactcgcagcaataaacattcctactccacccgcaaagcct
gacgaggatagtaattctgccaagggatcagcaaacgatagccgcaccagtacgcctgaa
ccaaaaatgcaatttaaagacaaaaaggaggcaatcgaagcatttaaagaattattaaga
gaacgagatgtaccatcgaatgctacatgggaacaagcagtaaaattaattcaaagcgat
ccaagatatccgcaaatgaagaaattgaatgaacgtaaacaagcatttaatgcatacaaa
acgcaaaaacttaaagaggaacgtgaacaagaacgattgagattaaaaaaggctaaagaa
gatttggaacagtttttattagaaaatgataggatgacgagtacaacaaaatattacaaa
tgcgaagaaatgttcggtaatttggaagtatggagagcagtaggtgattcagatcgccgt
gacatttatgaagatgttatttttaatttggctaaacgcgagaaagaagaagcaaagcaa
ctgaagaaaagaaataccaagagattagctcaagttttagatactatgactgatgttaca
tatagaactacttggcaggaagcgcaagcattgcttctacaacatgcagcttttgcagag
gatgcagatttattggaaatggacaaagaagatgccttacttgtgtttgaaaatcacata
cggcaattagagaaagatgaagaggaggagaaggaacatgagaaaaaacgtagaaaacga
caggaaagaaaaaatagggatgcctttataagtttgctcgatgaacttcacgaacaagga
aaattaacgtcaatgtcactttgggtagaactttatccaatgttatctgccgacttaaga
ttttcagctatgcttgggcaatctggatcaacgcctctggatctttttaagttttacgtc
gaagatttgaaatctagattccacgatgaaaaaaaaattataagagagattctaaaagac
aaaaactttgaagtgcaagttaacacaactttcgaagaatttgcaactgttgtatgcgag
gacagaaagtcggcaacattagatgcagggaatgtaaagttgacatacaatttactactt
gaaaaagctgaagcacgtgaaaaagaacgggtgaaggaggaaactaggaaatttaaaaaa
ttagaaacaggtttcaaaaatttgttgaaaacccttaatgttgattatcaaatgacatgg
gaagatgtacgaagcaaaattgaggaagaacctgactttaaggcgatcacgttagaaagt
gaaagagttcggatttttaaagaatatcagcacgaactcgaagaaagttgtagtcaccat
catattagaagtaaaaagaaaaaaacaaagaaagtgaaacgaaaatcacgatctcgatcg
cacagtgaatctgaaggtagcgataaaggtataaagaaaaaacgtcataagtcacggtcg
ccaagtattcctagtaaatcggacagttccgagtctgatactagaaaatcaaaaagaaaa
aagaataagaagaagagggggcgcagtcactctcgatcacattcaaggcttccatcttcc
gaagaatcaccggaacaaaaacgaaaagaggaaaagcatagaagaccttcggctcacagt
gaaggttctgtaactgaaaacgctgagcaccatgaactatcagaggatgagttagaaaaa
caaagagcgcaattattacgcgagttacagatgcaacaagaagataattga
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