KEGG   Colletes gigas: 122404684
Entry
122404684         CDS       T07492                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
cgig  Colletes gigas
Pathway
cgig03030  DNA replication
cgig03410  Base excision repair
cgig03420  Nucleotide excision repair
cgig03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122404684
   03410 Base excision repair
    122404684
   03420 Nucleotide excision repair
    122404684
   03430 Mismatch repair
    122404684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgig03032]
    122404684
   03036 Chromosome and associated proteins [BR:cgig03036]
    122404684
   03400 DNA repair and recombination proteins [BR:cgig03400]
    122404684
DNA replication proteins [BR:cgig03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122404684
  DNA Replication Termination Factors
   ELG1-RFC complex
    122404684
Chromosome and associated proteins [BR:cgig03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122404684
DNA repair and recombination proteins [BR:cgig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122404684
  Check point factors
   HRAD17(Rad24)-RFC complex
    122404684
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_16 AAA_11 AAA_22 AAA_24 Mg_chelatase AAA_assoc_2 Pol_alpha_B_N AAA_30 ResIII bpMoxR DUF815 AAA_14 ATPase_2 AAA_19 SLFN-g3_helicase RuvB_N AAA_5 AAA_7 MCM AAA_2
Other DBs
NCBI-GeneID: 122404684
NCBI-ProteinID: XP_043264803
LinkDB
Position
Unknown
AA seq 357 aa
MQAFLKTGKLGPGESKKPSTSRTKEERSAPAPPWVEKYRPRTVEDVVEQGEVVEVLRQCL
KGNDFPNLLFYGPPGTGKTSTILAAARQLFGSLYKQRILELNASDERGIQVVRDKIKSFA
QLTAGGSRDDGKRCPPFKIIILDEADSMTNAAQSALRRTMEKESHSTRFCLICNYVSRII
EPLTSRCTKFRFKPLGEDKIIKRLEYICKLEDLKAEKSVLLKIVDVSGGDLRRAITCLQS
ITRLKGQSIEITVDDVVEIIGVVPDKWLDKLMEVCKTKDYSKAEAFVDEFMLEAYATSQV
IEQLSERIIYSNELSDKQKALIAEKLGECNYRLLDGGSEYIQLICLCCGIMKAYELV
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaggcgtttttgaaaacgggaaaattgggacctggagaatctaaaaaaccttcgaca
tcacgtacaaaggaagaacgtagcgccccagcaccgccatgggtagaaaaataccgcccg
agaaccgtggaagatgtagtcgaacaaggagaagtagtcgaggtattgaggcaatgttta
aagggcaatgattttccaaatttgttattttacggtcctccgggaactggtaaaacaagt
acaatattagcagcggccagacaattgtttggtagtctttacaaacagagaatattggaa
ttaaatgcctcggatgaaagaggtatccaagttgtgagggataagattaaatcatttgct
caacttacagcaggtggctcgagagacgacgggaaacgttgtccgcctttcaaaattatt
attctcgacgaagcggatagtatgaccaacgccgcgcaatcagctcttcgtcgtaccatg
gaaaaggaatctcatagtactcgcttttgtttaatttgcaactatgtatctagaattata
gaaccactgacttcacgttgtacaaaattcagattcaagcctctgggagaagataaaatc
ataaaaagattagagtatatatgcaaactggaggacttgaaagcagaaaagtctgtttta
ttaaaaattgttgatgtctcgggtggagatttgagacgcgccataacgtgtttacagtct
attacaagattaaagggtcaaagcatcgaaattacggtggatgatgtcgttgaaataata
ggggttgttcctgataaatggttggacaagttgatggaagtgtgcaaaacaaaagactat
agcaaggctgaagcatttgtcgacgaatttatgttggaagcgtacgctacgtctcaagtt
atcgaacagctcagcgaaagaattatatattccaacgaattatcggacaaacaaaaagct
ttgatcgcagagaaacttggggaatgtaactatagattgttagatggtggaagcgaatat
atacaacttatatgtctttgttgcggcataatgaaagcttacgaattagtgtaa

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